BLASTX nr result

ID: Coptis23_contig00001071 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001071
         (2421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632306.1| PREDICTED: uncharacterized protein LOC100855...   135   7e-29
ref|XP_002524764.1| conserved hypothetical protein [Ricinus comm...   108   5e-21
ref|XP_002302107.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-18
ref|XP_002306781.1| predicted protein [Populus trichocarpa] gi|2...    98   9e-18
ref|XP_004158617.1| PREDICTED: uncharacterized LOC101223034 [Cuc...    96   3e-17

>ref|XP_003632306.1| PREDICTED: uncharacterized protein LOC100855240 [Vitis vinifera]
          Length = 196

 Score =  135 bits (339), Expect = 7e-29
 Identities = 91/207 (43%), Positives = 112/207 (54%), Gaps = 9/207 (4%)
 Frame = +2

Query: 281 METLVVVPQHRNQYYGRNGSYVHDSY-GSPNGGFRDFNCR-FLAREGILSTPLKPCYVAS 454
           METL+VVPQHRNQYYGR+ ++  D +  SP+  FR+ NCR F +  GIL TPLK C    
Sbjct: 1   METLLVVPQHRNQYYGRSKAHGSDRFVSSPSSDFREINCRTFESGAGILPTPLKACTTPV 60

Query: 455 A------DKMTPSPKPRKQFKAHSEGEKRLRNNGTSVAIPISL-KVGNLEKSFSDDLSYA 613
           A       + TPSP        HSE  K+ +  G S AI I   +  N EKSF DD SY 
Sbjct: 61  AKGACPLSQKTPSP--------HSEDSKQAKTTGKSSAIAIPFAEASNYEKSFHDDFSYC 112

Query: 614 ELFAGXXXXXXXXXXXXXXXXXXLRQKRSVSLELPVKEYGLKIHHVAKSAPSSPRGGSCH 793
           EL+AG                  +R KR+VSL+LP     +K+H +AKSAP SP      
Sbjct: 113 ELWAGPAYSNSPPPSSLPIPKFSMRPKRTVSLDLPGSAPVIKMHAIAKSAPPSPTREPYP 172

Query: 794 SHDDFFRSTASDALATKDLRRILNLDI 874
           S  DF         ATK+LRRILNL+I
Sbjct: 173 SPRDF------TDFATKNLRRILNLNI 193


>ref|XP_002524764.1| conserved hypothetical protein [Ricinus communis]
           gi|223535948|gb|EEF37607.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 204

 Score =  108 bits (271), Expect = 5e-21
 Identities = 79/209 (37%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
 Frame = +2

Query: 281 METLVVVPQHRN-QYYGRNGSY--VHDSYGSPNGGFRDFNCR-FLAREGILSTPLKPCYV 448
           METLVVV QHRN QYY R  SY      Y SP   FR+ NCR F +  GIL TP + C  
Sbjct: 1   METLVVVNQHRNHQYYSRLKSYKPARCGYSSPTSHFREINCRTFESGAGILPTPFRTC-- 58

Query: 449 ASADKMTPSPKPRKQFKAHSEGEKRLRNNGTSVAIPISLKVGNLEKSFSDDLS------- 607
                 TP         +       ++ +  + ++PIS+ +     SF D+L        
Sbjct: 59  -----TTPVTHTTPTSTSQKTPPPTIKTHALASSLPISINIPTKGTSFDDELGITGENSP 113

Query: 608 YAELFAGXXXXXXXXXXXXXXXXXXLRQKRSVSLELPVKEYGLKIHHVAKSAPSSPRGGS 787
           ++E +AG                  +R KR+VSLELPV + G+K+H  AKSAPSSP    
Sbjct: 114 FSERWAGPAYSNSPPPSSLPIPKFSMRPKRTVSLELPVCDSGIKVHSFAKSAPSSPTREH 173

Query: 788 CHSHDDFFRSTASDALATKDLRRILNLDI 874
             S  +   S  S   ATK LRRILNLD+
Sbjct: 174 NSSTRELLLSVDS---ATKTLRRILNLDV 199


>ref|XP_002302107.1| predicted protein [Populus trichocarpa] gi|222843833|gb|EEE81380.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score =  100 bits (248), Expect = 2e-18
 Identities = 81/220 (36%), Positives = 103/220 (46%), Gaps = 22/220 (10%)
 Frame = +2

Query: 281 METLVVVPQHRNQYYGRNGSYVHDSYG-SPNGGFRDFNCR-FLAREGILSTPLKPCYV-- 448
           METLVVV QHRNQYY +  S     +G SP+  F+D NCR F +R+GIL TP +      
Sbjct: 1   METLVVVAQHRNQYYTKVRSNGPAKFGTSPSKHFKDINCRTFQSRDGILPTPFQASTTTV 60

Query: 449 ---------ASADKMTPSPKPRKQFKAHSEGEKRLRNNGTSVAIPISLKVGNLEKSFSDD 601
                     S    TP P  + QF +H       +    S  I I++ V   E SF +D
Sbjct: 61  TKITSHVPPTSNSPKTPPPAIKSQFNSHPVDNGNFKTISKSSPITINVTVPRKETSFYED 120

Query: 602 -------LSYAELFAGXXXXXXXXXXXXXXXXXXLR-QKRSVSLELPVKE-YGLKIHHVA 754
                  L ++E +AG                  +R  KR+VSL+LPV       +   A
Sbjct: 121 MGFGNENLPFSERWAGPAYSNSPPPSSLPIPKFSMRPPKRTVSLDLPVNHGTDFNVQPTA 180

Query: 755 KSAPSSPRGGSCHSHDDFFRSTASDALATKDLRRILNLDI 874
           KSAP+SP      S  D F S  S   ATK LRRILNLD+
Sbjct: 181 KSAPASPSREHSPSMKDLFLSADS---ATKTLRRILNLDV 217


>ref|XP_002306781.1| predicted protein [Populus trichocarpa] gi|222856230|gb|EEE93777.1|
           predicted protein [Populus trichocarpa]
          Length = 219

 Score = 98.2 bits (243), Expect = 9e-18
 Identities = 79/219 (36%), Positives = 105/219 (47%), Gaps = 21/219 (9%)
 Frame = +2

Query: 281 METLVVVPQHRNQYYGRNGSYVHDSYG-SPNGGFRDFNCR-FLAREGILSTPLKPCYV-- 448
           METLVVV +HRNQYY     +    +G SP+  FRD NCR F +  G+L TP +      
Sbjct: 1   METLVVVAEHRNQYYSGVEPHGPAKFGASPSKHFRDINCRTFQSGAGLLPTPFQTSTTPV 60

Query: 449 --------ASADKMTPSPKPRKQFKAHSEGEKRLRNNGTSVAIPISLKVGNLEKSFSD-- 598
                   AS    TPSP  +    +HS    RL+    S  I  ++K+   E SF++  
Sbjct: 61  TKSTTLAPASHSPKTPSPAVKFHSNSHSVDNGRLKTASKSSPITFNVKISRKETSFNEAI 120

Query: 599 -----DLSYAELFAGXXXXXXXXXXXXXXXXXXLR-QKRSVSLELPVK-EYGLKIHHVAK 757
                +L ++EL+AG                  +R  KR+VSL+LPV  +    +   AK
Sbjct: 121 GFVNGNLPFSELWAGPAYSNSPPPSSLPIPKFSMRPPKRTVSLDLPVSDDADFDVQPTAK 180

Query: 758 SAPSSPRGGSCHSHDDFFRSTASDALATKDLRRILNLDI 874
           SAP+SP      S  D   S  S   ATK LRRILNLD+
Sbjct: 181 SAPASPSREHSPSIRDLLLSADS---ATKTLRRILNLDV 216


>ref|XP_004158617.1| PREDICTED: uncharacterized LOC101223034 [Cucumis sativus]
          Length = 204

 Score = 96.3 bits (238), Expect = 3e-17
 Identities = 81/209 (38%), Positives = 103/209 (49%), Gaps = 9/209 (4%)
 Frame = +2

Query: 281 METLVVVPQHRNQYYGRNGSYVHDSYGS-PNGGFRDFNCR-FLAREGILSTPLKPCYVAS 454
           ME +VV+ QHRNQYY R   +    +GS  +  FR  NCR F +  GIL TPLK C  + 
Sbjct: 1   MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDFRGMNCRSFQSGAGILPTPLKACN-SE 59

Query: 455 ADKMTPSPK-PRKQFKAHSEGEKRLRNNGTSVAIPISLKVGNLEKSFSDD-----LSYAE 616
            +   PSPK P     ++SE  K+L     S  IPI  K  N   +F ++      S++E
Sbjct: 60  TEHFYPSPKTPPPCLTSNSENRKQLATM-RSTPIPIKPKSSNQSNAFHEEFYDRSFSFSE 118

Query: 617 LFAGXXXXXXXXXXXXXXXXXXLRQKRSVSLELPVKEYGLKIHH-VAKSAPSSPRGGSCH 793
           L+AG                  +  KR+ SLEL       ++HH  AKSAP SP      
Sbjct: 119 LWAGPTYSNSPPPSSLPIPKFSV-AKRTTSLELARSAPEFEMHHPSAKSAPPSPTRDQNF 177

Query: 794 SHDDFFRSTASDALATKDLRRILNLDIDN 880
           S   FF S  S   ATK LRRILNLD+ N
Sbjct: 178 SARFFFHSADS---ATKTLRRILNLDVAN 203


Top