BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001063
         (1931 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   343   1e-91
emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]   340   6e-91
ref|XP_002269373.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   322   3e-85
emb|CAN82964.1| hypothetical protein VITISV_000345 [Vitis vinifera]   318   2e-84
ref|XP_002283100.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   315   2e-83

>ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 388

 Score =  343 bits (879), Expect = 1e-91
 Identities = 192/349 (55%), Positives = 215/349 (61%), Gaps = 1/349 (0%)
 Frame = -2

Query: 1720 MGSNSSHWCYSCSRFVRILESDSSSIVCSNCQGGFVEEIENPPPTRSITTTRNDLDSSQP 1541
            M S +S+WC+ C+RFVR+   DS  IVC  C+ GF+EEIE  P              S+ 
Sbjct: 3    MASTTSYWCHRCTRFVRVWAQDS--IVCPYCESGFLEEIEATP-------------RSEN 47

Query: 1540 RRRRFPXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFNPVIVLR 1361
              RRFP                                              FNPVIVLR
Sbjct: 48   HHRRFPATAMYMLGNNRPDSEQSANLGLRRSRRNAGDRSP------------FNPVIVLR 95

Query: 1360 GPSDNNNNNVER-ERGSFELYYDDGAGSGLQPLPASMSDFLMGSGFDRLLDQLAQIEING 1184
            GP+D         ER SFELYYDDGAGSGL+PLPA+MS+FLMGSGFDRLL+QL+QIEING
Sbjct: 96   GPADGGGGEGGVVERSSFELYYDDGAGSGLRPLPATMSEFLMGSGFDRLLEQLSQIEING 155

Query: 1183 VGGNGRCEHPPASKAAIESMPTIEIVGSHIMMDSHCAVCKEAFELGTDAREMPCKHIYHS 1004
             G   R EHPPASKAA+ESMPTIEIV SHI+ + HCAVCKEAF+LG++AREMPCKHIYHS
Sbjct: 156  FG---RGEHPPASKAAVESMPTIEIVSSHIVTELHCAVCKEAFQLGSEAREMPCKHIYHS 212

Query: 1003 DCILPWLSLRNSCPVCRHELPTAVTTDVGNVRTGSSPVSDGSTTENEIPSPVQAEDDAVG 824
            DCILPWLSLRNSCPVCRHELPT V        T +SPVS      NE  SP   E++ VG
Sbjct: 213  DCILPWLSLRNSCPVCRHELPTDVP------GTRNSPVSG-----NEALSPAPNEEETVG 261

Query: 823  LTIWRLPXXXXXXXXXXXXXXXAERELPVVYTEMDGDFNNGGAPRRISW 677
            LTIWRLP                ERELPVVYTEMDG FNN GAPRRISW
Sbjct: 262  LTIWRLPGGGFAVGRFSGGRRAGERELPVVYTEMDGGFNNSGAPRRISW 310


>emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]
          Length = 1218

 Score =  340 bits (873), Expect = 6e-91
 Identities = 191/349 (54%), Positives = 214/349 (61%), Gaps = 1/349 (0%)
 Frame = -2

Query: 1720 MGSNSSHWCYSCSRFVRILESDSSSIVCSNCQGGFVEEIENPPPTRSITTTRNDLDSSQP 1541
            M S +S+WC+ C+RFVR+   DS  IVC  C+ GF+EEIE  P              S+ 
Sbjct: 113  MASTTSYWCHRCTRFVRVWAQDS--IVCPYCESGFLEEIEATP-------------RSEN 157

Query: 1540 RRRRFPXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFNPVIVLR 1361
              RRFP                                              FNPVIVLR
Sbjct: 158  HHRRFPATAMYMLGNNRPDSEQSANLGLRRSRRNAGDRSP------------FNPVIVLR 205

Query: 1360 GPSDNNNNNVER-ERGSFELYYDDGAGSGLQPLPASMSDFLMGSGFDRLLDQLAQIEING 1184
            GP+D         ER SFELYYDDGAGSGL+PLPA+MS+FLMGSGFDRLL+QL+QIEING
Sbjct: 206  GPADGGGGEGGVVERSSFELYYDDGAGSGLRPLPATMSEFLMGSGFDRLLEQLSQIEING 265

Query: 1183 VGGNGRCEHPPASKAAIESMPTIEIVGSHIMMDSHCAVCKEAFELGTDAREMPCKHIYHS 1004
             G   R EHPPASKAA+ESMPTIEIV SHI+ + HCAVCKEAF+LG++AREMPCKHIYHS
Sbjct: 266  FG---RGEHPPASKAAVESMPTIEIVSSHIVTELHCAVCKEAFQLGSEAREMPCKHIYHS 322

Query: 1003 DCILPWLSLRNSCPVCRHELPTAVTTDVGNVRTGSSPVSDGSTTENEIPSPVQAEDDAVG 824
            DCILPWLSLRNSCPVCRHELPT V        T +SPVS       E  SP   E++ VG
Sbjct: 323  DCILPWLSLRNSCPVCRHELPTDVP------GTRNSPVSG-----TEALSPAPNEEETVG 371

Query: 823  LTIWRLPXXXXXXXXXXXXXXXAERELPVVYTEMDGDFNNGGAPRRISW 677
            LTIWRLP                ERELPVVYTEMDG FNN GAPRRISW
Sbjct: 372  LTIWRLPGGGFAVGRFSGGRRAGERELPVVYTEMDGGFNNSGAPRRISW 420


>ref|XP_002269373.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 2 [Vitis
            vinifera]
          Length = 365

 Score =  322 bits (824), Expect = 3e-85
 Identities = 178/349 (51%), Positives = 205/349 (58%), Gaps = 3/349 (0%)
 Frame = -2

Query: 1714 SNSSHWCYSCSRFVRILESDSSSIVCSNCQGGFVEEIENPPPTRSITTTRNDLDSSQPRR 1535
            S SS WCY C+RF+R+   D+  I+C +C  GFVE+I N               S  PRR
Sbjct: 5    SGSSFWCYRCNRFIRVWAQDA--ILCPDCGSGFVEQINNL--------------SRSPRR 48

Query: 1534 RRFPXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFNPVIVLRGP 1355
            RR P                                              FNPVIVLRG 
Sbjct: 49   RRLPGSAMYLENRNALDQDPVPRIRRARRSGGDRSL--------------FNPVIVLRGS 94

Query: 1354 SDNNNNN---VERERGSFELYYDDGAGSGLQPLPASMSDFLMGSGFDRLLDQLAQIEING 1184
            +D N +       ERG+FELYYDDG GSGL+PLPAS+S+FLMGSGFDRLLDQLAQ+EING
Sbjct: 95   ADVNGSEGGGTSGERGNFELYYDDGTGSGLRPLPASVSEFLMGSGFDRLLDQLAQLEING 154

Query: 1183 VGGNGRCEHPPASKAAIESMPTIEIVGSHIMMDSHCAVCKEAFELGTDAREMPCKHIYHS 1004
             G   RCEHPPASKAA+ES+PTI+IV SH++ +SHCAVCKE FEL ++ARE+PCKHIYHS
Sbjct: 155  AG---RCEHPPASKAAVESLPTIKIVASHVLSESHCAVCKEPFELDSEARELPCKHIYHS 211

Query: 1003 DCILPWLSLRNSCPVCRHELPTAVTTDVGNVRTGSSPVSDGSTTENEIPSPVQAEDDAVG 824
            DCILPWLSLRNSCPVCRHELPT                S    +   + SP   E+D VG
Sbjct: 212  DCILPWLSLRNSCPVCRHELPTD---------------SHEGGSSGHLQSPGLTEEDNVG 256

Query: 823  LTIWRLPXXXXXXXXXXXXXXXAERELPVVYTEMDGDFNNGGAPRRISW 677
            LTIWRLP               AERELPVV+TEMDG FN  GA RR  W
Sbjct: 257  LTIWRLPGGGFAVGRFTGGRQAAERELPVVFTEMDGGFNPSGASRRNPW 305


>emb|CAN82964.1| hypothetical protein VITISV_000345 [Vitis vinifera]
          Length = 364

 Score =  318 bits (816), Expect = 2e-84
 Identities = 177/349 (50%), Positives = 204/349 (58%), Gaps = 3/349 (0%)
 Frame = -2

Query: 1714 SNSSHWCYSCSRFVRILESDSSSIVCSNCQGGFVEEIENPPPTRSITTTRNDLDSSQPRR 1535
            S SS WCY C+RF+R+   D+  I+C +C  GFVE+I N               S  PRR
Sbjct: 4    SGSSFWCYRCNRFIRVWAQDA--ILCPDCGSGFVEQINNL--------------SRSPRR 47

Query: 1534 RRFPXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFNPVIVLRGP 1355
            RR P                                              FNPVIVLRG 
Sbjct: 48   RRLPGSAMYLENRNALDQDPVPRIRRARRSGGDRSL--------------FNPVIVLRGS 93

Query: 1354 SDNNNNN---VERERGSFELYYDDGAGSGLQPLPASMSDFLMGSGFDRLLDQLAQIEING 1184
            +D N +       ERG+FELYYDDG GSGL+PLPAS+S+FLMGSGFDRLLDQLAQ+EING
Sbjct: 94   ADVNGSEGGGTSGERGNFELYYDDGTGSGLRPLPASVSEFLMGSGFDRLLDQLAQLEING 153

Query: 1183 VGGNGRCEHPPASKAAIESMPTIEIVGSHIMMDSHCAVCKEAFELGTDAREMPCKHIYHS 1004
             G   RCEHPPASKAA+ES+PTI+IV SH++ +SHCAVCKE FEL ++ARE+PCKHIYHS
Sbjct: 154  AG---RCEHPPASKAAVESLPTIKIVASHVLSESHCAVCKEPFELDSEARELPCKHIYHS 210

Query: 1003 DCILPWLSLRNSCPVCRHELPTAVTTDVGNVRTGSSPVSDGSTTENEIPSPVQAEDDAVG 824
            DCILPWLSLRNSCPVCRHELPT                S    +   + S    E+D VG
Sbjct: 211  DCILPWLSLRNSCPVCRHELPTD---------------SHEGGSSGHLQSXGLTEEDNVG 255

Query: 823  LTIWRLPXXXXXXXXXXXXXXXAERELPVVYTEMDGDFNNGGAPRRISW 677
            LTIWRLP               AERELPVV+TEMDG FN  GA RR  W
Sbjct: 256  LTIWRLPGGGFAVGRFTGGRQAAERELPVVFTEMDGGFNPSGASRRNPW 304


>ref|XP_002283100.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 361

 Score =  315 bits (808), Expect = 2e-83
 Identities = 175/344 (50%), Positives = 201/344 (58%), Gaps = 1/344 (0%)
 Frame = -2

Query: 1705 SHWCYSCSRFVRILESDSSSIVCSNCQGGFVEEIENPPPTRSITTTRNDLDSSQPRR-RR 1529
            S+WCYSC+RFVR+   D+  IVC +C GGF+EEIE                  QPRR  R
Sbjct: 2    SYWCYSCNRFVRVWSHDA--IVCPDCDGGFLEEIEE-----------------QPRRPHR 42

Query: 1528 FPXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFNPVIVLRGPSD 1349
            FP                                              FNPVIV+RG +D
Sbjct: 43   FPAAAMYMIENRPNSAQNSHSAVRRIRRGRGDRSP-------------FNPVIVMRGTAD 89

Query: 1348 NNNNNVERERGSFELYYDDGAGSGLQPLPASMSDFLMGSGFDRLLDQLAQIEINGVGGNG 1169
                    +RG+F+LYYDDG GSGL+PLPAS+S+FL+GSGFDRLL+QL+Q+EING+G   
Sbjct: 90   EGGGE-GGDRGAFDLYYDDGGGSGLRPLPASVSEFLLGSGFDRLLEQLSQMEINGIG--- 145

Query: 1168 RCEHPPASKAAIESMPTIEIVGSHIMMDSHCAVCKEAFELGTDAREMPCKHIYHSDCILP 989
            R E PPASKAAIE+MPTIEI  +H+  + HCAVCKE FELG +AREMPCKHIYHSDCILP
Sbjct: 146  RYEQPPASKAAIEAMPTIEIADAHVNTEHHCAVCKEPFELGAEAREMPCKHIYHSDCILP 205

Query: 988  WLSLRNSCPVCRHELPTAVTTDVGNVRTGSSPVSDGSTTENEIPSPVQAEDDAVGLTIWR 809
            WLSLRNSCPVCRHELP                    S   N   S  Q  ++ VGLTIWR
Sbjct: 206  WLSLRNSCPVCRHELP--------------------SEERNSPESNEQTPEETVGLTIWR 245

Query: 808  LPXXXXXXXXXXXXXXXAERELPVVYTEMDGDFNNGGAPRRISW 677
            LP                ERELPVVYTEMDG FNNGGAPRRISW
Sbjct: 246  LPGGGFAVGRFSGGRRGGERELPVVYTEMDGGFNNGGAPRRISW 289