BLASTX nr result

ID: Coptis23_contig00001059 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001059
         (2386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527602.1| nucleic acid binding protein, putative [Rici...   267   1e-68
ref|XP_002316904.1| predicted protein [Populus trichocarpa] gi|2...   265   5e-68
ref|XP_003543245.1| PREDICTED: uncharacterized protein LOC100778...   262   4e-67
ref|NP_001053388.1| Os04g0530300 [Oryza sativa Japonica Group] g...   261   6e-67
emb|CBI20322.3| unnamed protein product [Vitis vinifera]              260   1e-66

>ref|XP_002527602.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223533019|gb|EEF34783.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 327

 Score =  267 bits (682), Expect = 1e-68
 Identities = 132/156 (84%), Positives = 141/156 (90%), Gaps = 1/156 (0%)
 Frame = -2

Query: 834 AVTNSWGKYGIIREIDMWNKRPEFTAWLLEVKQVNLESLPNWEEKQMFKQFMEDHNTATF 655
           AVT+SWGKYG+IRE DMWNKRPEFTAWL EVKQVNLESLPNWEEKQMFK+FMEDHNTATF
Sbjct: 161 AVTDSWGKYGVIRETDMWNKRPEFTAWLAEVKQVNLESLPNWEEKQMFKEFMEDHNTATF 220

Query: 654 PSKKYYDLDAYHKRKMEKEMKKGY-KILETERTVFNDEEQRRHELTLVREKQKEEQVVAL 478
           PSKKYY+LDAY+KR+MEKEMKKG+ K  ETERTVFNDEEQRR EL   REKQKE++V AL
Sbjct: 221 PSKKYYNLDAYYKRQMEKEMKKGFKKFQETERTVFNDEEQRRQELMRAREKQKEQEVEAL 280

Query: 477 KRSMQSGMAQAMKEQAQLREEMALHYKLGNSEAAAA 370
           K SMQSGMAQAMKEQ QLREEMA  YKLGN EAAAA
Sbjct: 281 KISMQSGMAQAMKEQTQLREEMAYQYKLGNFEAAAA 316


>ref|XP_002316904.1| predicted protein [Populus trichocarpa] gi|222859969|gb|EEE97516.1|
           predicted protein [Populus trichocarpa]
          Length = 288

 Score =  265 bits (676), Expect = 5e-68
 Identities = 131/156 (83%), Positives = 141/156 (90%), Gaps = 1/156 (0%)
 Frame = -2

Query: 834 AVTNSWGKYGIIREIDMWNKRPEFTAWLLEVKQVNLESLPNWEEKQMFKQFMEDHNTATF 655
           AVTNSWGKYGIIRE DMWNKRPEFTAWL EVKQVNLE+LPNWEEKQMFKQFMEDHNTATF
Sbjct: 122 AVTNSWGKYGIIRETDMWNKRPEFTAWLAEVKQVNLETLPNWEEKQMFKQFMEDHNTATF 181

Query: 654 PSKKYYDLDAYHKRKMEKEMKKGY-KILETERTVFNDEEQRRHELTLVREKQKEEQVVAL 478
           PSKKYY+LDAY++ KMEKE+KKG+ K++ +ERTVFNDEEQRR EL   REKQKE +V AL
Sbjct: 182 PSKKYYNLDAYYQHKMEKELKKGFKKVMASERTVFNDEEQRRQELMREREKQKEAEVEAL 241

Query: 477 KRSMQSGMAQAMKEQAQLREEMALHYKLGNSEAAAA 370
           K SMQSGMAQAMKEQAQLREEMA  YKLGN EAAAA
Sbjct: 242 KCSMQSGMAQAMKEQAQLREEMAYQYKLGNFEAAAA 277


>ref|XP_003543245.1| PREDICTED: uncharacterized protein LOC100778706 [Glycine max]
          Length = 380

 Score =  262 bits (669), Expect = 4e-67
 Identities = 127/156 (81%), Positives = 140/156 (89%), Gaps = 1/156 (0%)
 Frame = -2

Query: 834 AVTNSWGKYGIIREIDMWNKRPEFTAWLLEVKQVNLESLPNWEEKQMFKQFMEDHNTATF 655
           AVTNSWGKYG+IRE DMW KRPEFTAWL EVKQVNLE++ NWEEKQMFK+FMEDHNTATF
Sbjct: 214 AVTNSWGKYGVIRETDMWTKRPEFTAWLAEVKQVNLENMSNWEEKQMFKEFMEDHNTATF 273

Query: 654 PSKKYYDLDAYHKRKMEKEMKKGY-KILETERTVFNDEEQRRHELTLVREKQKEEQVVAL 478
           PSKKYY+LDAY++R+MEKEMKKG+ K+  TERT+FNDEEQRR EL   REK KEEQV+AL
Sbjct: 274 PSKKYYNLDAYYRREMEKEMKKGFKKVQATERTIFNDEEQRRQELLQAREKHKEEQVMAL 333

Query: 477 KRSMQSGMAQAMKEQAQLREEMALHYKLGNSEAAAA 370
           K SMQ+GMAQAMKEQAQLREEMA  YKLGN EAAAA
Sbjct: 334 KHSMQTGMAQAMKEQAQLREEMAYQYKLGNFEAAAA 369


>ref|NP_001053388.1| Os04g0530300 [Oryza sativa Japonica Group]
           gi|38346625|emb|CAD41208.2| OSJNBa0074L08.19 [Oryza
           sativa Japonica Group] gi|38346756|emb|CAE03861.2|
           OSJNBa0081C01.7 [Oryza sativa Japonica Group]
           gi|113564959|dbj|BAF15302.1| Os04g0530300 [Oryza sativa
           Japonica Group] gi|218195261|gb|EEC77688.1| hypothetical
           protein OsI_16745 [Oryza sativa Indica Group]
           gi|222629255|gb|EEE61387.1| hypothetical protein
           OsJ_15558 [Oryza sativa Japonica Group]
          Length = 357

 Score =  261 bits (667), Expect = 6e-67
 Identities = 130/156 (83%), Positives = 139/156 (89%), Gaps = 1/156 (0%)
 Frame = -2

Query: 834 AVTNSWGKYGIIREIDMWNKRPEFTAWLLEVKQVNLESLPNWEEKQMFKQFMEDHNTATF 655
           AVTNSWGKYGIIRE+DMWNKRPEFTAWL EVKQVNLE+L NWEEKQMFK+FMEDHNTATF
Sbjct: 190 AVTNSWGKYGIIREVDMWNKRPEFTAWLSEVKQVNLEALSNWEEKQMFKEFMEDHNTATF 249

Query: 654 PSKKYYDLDAYHKRKMEKEMKKGYK-ILETERTVFNDEEQRRHELTLVREKQKEEQVVAL 478
           PSKKYYDLDAYH+R MEKE KKG K  L TERTVFNDEEQRR EL   RE+QKEE+V AL
Sbjct: 250 PSKKYYDLDAYHRRVMEKEKKKGLKNALGTERTVFNDEEQRRLELLRERERQKEEEVAAL 309

Query: 477 KRSMQSGMAQAMKEQAQLREEMALHYKLGNSEAAAA 370
           KRSMQ+GMAQAMKEQA+LREEM   Y+LGN EAAAA
Sbjct: 310 KRSMQTGMAQAMKEQARLREEMMYQYRLGNFEAAAA 345


>emb|CBI20322.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  260 bits (665), Expect = 1e-66
 Identities = 130/156 (83%), Positives = 140/156 (89%), Gaps = 1/156 (0%)
 Frame = -2

Query: 834 AVTNSWGKYGIIREIDMWNKRPEFTAWLLEVKQVNLESLPNWEEKQMFKQFMEDHNTATF 655
           AVTNSWGKYGIIRE DMWNKRPEFTAWL E+KQVNLESLPNWEEKQMFK+FMEDHNTATF
Sbjct: 521 AVTNSWGKYGIIRESDMWNKRPEFTAWLAEIKQVNLESLPNWEEKQMFKEFMEDHNTATF 580

Query: 654 PSKKYYDLDAYHKRKMEKEMKKG-YKILETERTVFNDEEQRRHELTLVREKQKEEQVVAL 478
            SKKYY++DAY+++KME+EMKKG  K LETERTVFNDEEQRR EL   RE+ KE QV  L
Sbjct: 581 TSKKYYNIDAYYRQKMEREMKKGSKKALETERTVFNDEEQRRLELQRERERYKEVQVEEL 640

Query: 477 KRSMQSGMAQAMKEQAQLREEMALHYKLGNSEAAAA 370
           KRSMQSGMAQAMKEQAQLREEMA  YK+GNSEAAAA
Sbjct: 641 KRSMQSGMAQAMKEQAQLREEMAYQYKVGNSEAAAA 676


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