BLASTX nr result

ID: Coptis23_contig00001052 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001052
         (926 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309559.1| predicted protein [Populus trichocarpa] gi|2...    63   7e-15
ref|XP_002516569.1| Coiled-coil domain-containing protein, putat...    64   6e-14
ref|XP_002284173.1| PREDICTED: coiled-coil domain-containing pro...    64   1e-13
emb|CAN72066.1| hypothetical protein VITISV_042589 [Vitis vinifera]    64   1e-13
emb|CBI20890.3| unnamed protein product [Vitis vinifera]               64   1e-13

>ref|XP_002309559.1| predicted protein [Populus trichocarpa] gi|222855535|gb|EEE93082.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score = 63.2 bits (152), Expect(2) = 7e-15
 Identities = 30/34 (88%), Positives = 33/34 (97%)
 Frame = -3

Query: 699 IRSYKGLMVAEKMTSNKQVASTNKSLQELEEDFM 598
           +RSYKGLMVAEKMTSNKQ+AS NKSLQELE+DFM
Sbjct: 182 MRSYKGLMVAEKMTSNKQIASENKSLQELEDDFM 215



 Score = 43.9 bits (102), Expect(2) = 7e-15
 Identities = 23/37 (62%), Positives = 24/37 (64%)
 Frame = -2

Query: 925 VNRLNKTKVERKPDLKXXXXXXXXXXXXXRKLHMRDK 815
           VNRLNKTKVERKPDLK             RKLH+RDK
Sbjct: 129 VNRLNKTKVERKPDLKAEREAVNAAERAERKLHLRDK 165


>ref|XP_002516569.1| Coiled-coil domain-containing protein, putative [Ricinus communis]
           gi|223544389|gb|EEF45910.1| Coiled-coil
           domain-containing protein, putative [Ricinus communis]
          Length = 215

 Score = 64.3 bits (155), Expect(2) = 6e-14
 Identities = 31/34 (91%), Positives = 33/34 (97%)
 Frame = -3

Query: 699 IRSYKGLMVAEKMTSNKQVASTNKSLQELEEDFM 598
           IRSYKGLMV+EKMTSNKQ+AS NKSLQELEEDFM
Sbjct: 182 IRSYKGLMVSEKMTSNKQIASENKSLQELEEDFM 215



 Score = 39.7 bits (91), Expect(2) = 6e-14
 Identities = 21/37 (56%), Positives = 23/37 (62%)
 Frame = -2

Query: 925 VNRLNKTKVERKPDLKXXXXXXXXXXXXXRKLHMRDK 815
           VNRLN+TKVERKPDLK             RKL +RDK
Sbjct: 129 VNRLNRTKVERKPDLKAEREAVNAAERAERKLQLRDK 165


>ref|XP_002284173.1| PREDICTED: coiled-coil domain-containing protein 25-like [Vitis
           vinifera]
          Length = 215

 Score = 63.5 bits (153), Expect(2) = 1e-13
 Identities = 30/34 (88%), Positives = 33/34 (97%)
 Frame = -3

Query: 699 IRSYKGLMVAEKMTSNKQVASTNKSLQELEEDFM 598
           IRSYKGLMV+EKMTSNKQ+AS NKSLQELE+DFM
Sbjct: 182 IRSYKGLMVSEKMTSNKQIASANKSLQELEDDFM 215



 Score = 39.7 bits (91), Expect(2) = 1e-13
 Identities = 21/37 (56%), Positives = 23/37 (62%)
 Frame = -2

Query: 925 VNRLNKTKVERKPDLKXXXXXXXXXXXXXRKLHMRDK 815
           VNRLN+TKVERKPDLK             RKL +RDK
Sbjct: 129 VNRLNRTKVERKPDLKAEREAVNAAERAERKLQLRDK 165


>emb|CAN72066.1| hypothetical protein VITISV_042589 [Vitis vinifera]
          Length = 199

 Score = 63.5 bits (153), Expect(2) = 1e-13
 Identities = 30/34 (88%), Positives = 33/34 (97%)
 Frame = -3

Query: 699 IRSYKGLMVAEKMTSNKQVASTNKSLQELEEDFM 598
           IRSYKGLMV+EKMTSNKQ+AS NKSLQELE+DFM
Sbjct: 166 IRSYKGLMVSEKMTSNKQIASANKSLQELEDDFM 199



 Score = 39.7 bits (91), Expect(2) = 1e-13
 Identities = 21/37 (56%), Positives = 23/37 (62%)
 Frame = -2

Query: 925 VNRLNKTKVERKPDLKXXXXXXXXXXXXXRKLHMRDK 815
           VNRLN+TKVERKPDLK             RKL +RDK
Sbjct: 113 VNRLNRTKVERKPDLKAEREAVNAAERAERKLQLRDK 149


>emb|CBI20890.3| unnamed protein product [Vitis vinifera]
          Length = 198

 Score = 63.5 bits (153), Expect(2) = 1e-13
 Identities = 30/34 (88%), Positives = 33/34 (97%)
 Frame = -3

Query: 699 IRSYKGLMVAEKMTSNKQVASTNKSLQELEEDFM 598
           IRSYKGLMV+EKMTSNKQ+AS NKSLQELE+DFM
Sbjct: 165 IRSYKGLMVSEKMTSNKQIASANKSLQELEDDFM 198



 Score = 39.7 bits (91), Expect(2) = 1e-13
 Identities = 21/37 (56%), Positives = 23/37 (62%)
 Frame = -2

Query: 925 VNRLNKTKVERKPDLKXXXXXXXXXXXXXRKLHMRDK 815
           VNRLN+TKVERKPDLK             RKL +RDK
Sbjct: 112 VNRLNRTKVERKPDLKAEREAVNAAERAERKLQLRDK 148


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