BLASTX nr result
ID: Coptis23_contig00001051
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00001051
(669 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266163.1| PREDICTED: ribosome biogenesis protein NSA2 ... 288 7e-76
emb|CBI22790.3| unnamed protein product [Vitis vinifera] 286 3e-75
gb|AFK39276.1| unknown [Lotus japonicus] 284 1e-74
gb|ABK92490.1| unknown [Populus trichocarpa] 284 1e-74
ref|XP_002323387.1| predicted protein [Populus trichocarpa] gi|2... 284 1e-74
>ref|XP_002266163.1| PREDICTED: ribosome biogenesis protein NSA2 homolog [Vitis
vinifera]
Length = 260
Score = 288 bits (737), Expect = 7e-76
Identities = 144/208 (69%), Positives = 161/208 (77%), Gaps = 7/208 (3%)
Frame = -1
Query: 603 MPQGDYIELHRKRYGYRPDHFERKRKRDAREVH---EVSRKAXXXXXXXXXXXXXXXXXX 433
MPQGDYI+LHRKR+GYRPDHFERKRK++AREVH E+++KA
Sbjct: 1 MPQGDYIDLHRKRHGYRPDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKAQ 60
Query: 432 XXXXXXXXXXXXXXXXXXX----GALPAYLLDREQTTRAKVLSNSIKQKRKEKAGKWDVP 265
GA+PAYLLDRE TTRAKVLSN+IKQKRKEKAGKW+VP
Sbjct: 61 MKKTLAMHEESSSRRKVDDDVHEGAVPAYLLDRETTTRAKVLSNTIKQKRKEKAGKWEVP 120
Query: 264 LPKVRPVAEDEMFKVVRTGQRKSKQWKRMVTKVTFVGPSFTRKPPKYERFIRPTGLRFSK 85
LPKVRPVAEDEMFKV+RTG+RK+KQWKRMVTK TFVGP+FTRKPPKYERFIRP+GLRF+K
Sbjct: 121 LPKVRPVAEDEMFKVLRTGKRKTKQWKRMVTKATFVGPAFTRKPPKYERFIRPSGLRFTK 180
Query: 84 AHVTHPELKCTFNLEIIGIKKNPNGNMY 1
AHVTHPELKCTFNLEIIG+KKNPNG MY
Sbjct: 181 AHVTHPELKCTFNLEIIGVKKNPNGQMY 208
>emb|CBI22790.3| unnamed protein product [Vitis vinifera]
Length = 280
Score = 286 bits (732), Expect = 3e-75
Identities = 143/207 (69%), Positives = 160/207 (77%), Gaps = 7/207 (3%)
Frame = -1
Query: 600 PQGDYIELHRKRYGYRPDHFERKRKRDAREVH---EVSRKAXXXXXXXXXXXXXXXXXXX 430
PQGDYI+LHRKR+GYRPDHFERKRK++AREVH E+++KA
Sbjct: 22 PQGDYIDLHRKRHGYRPDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKAQM 81
Query: 429 XXXXXXXXXXXXXXXXXX----GALPAYLLDREQTTRAKVLSNSIKQKRKEKAGKWDVPL 262
GA+PAYLLDRE TTRAKVLSN+IKQKRKEKAGKW+VPL
Sbjct: 82 KKTLAMHEESSSRRKVDDDVHEGAVPAYLLDRETTTRAKVLSNTIKQKRKEKAGKWEVPL 141
Query: 261 PKVRPVAEDEMFKVVRTGQRKSKQWKRMVTKVTFVGPSFTRKPPKYERFIRPTGLRFSKA 82
PKVRPVAEDEMFKV+RTG+RK+KQWKRMVTK TFVGP+FTRKPPKYERFIRP+GLRF+KA
Sbjct: 142 PKVRPVAEDEMFKVLRTGKRKTKQWKRMVTKATFVGPAFTRKPPKYERFIRPSGLRFTKA 201
Query: 81 HVTHPELKCTFNLEIIGIKKNPNGNMY 1
HVTHPELKCTFNLEIIG+KKNPNG MY
Sbjct: 202 HVTHPELKCTFNLEIIGVKKNPNGQMY 228
>gb|AFK39276.1| unknown [Lotus japonicus]
Length = 260
Score = 284 bits (727), Expect = 1e-74
Identities = 141/208 (67%), Positives = 157/208 (75%), Gaps = 7/208 (3%)
Frame = -1
Query: 603 MPQGDYIELHRKRYGYRPDHFERKRKRDAREVH---EVSRKAXXXXXXXXXXXXXXXXXX 433
MPQGDYIE HR+ YGYRPDHFERKRK+DAREVH ++++KA
Sbjct: 1 MPQGDYIERHRRDYGYRPDHFERKRKKDAREVHKRSQIAQKAIGIKGKMIAKKNYTEKAQ 60
Query: 432 XXXXXXXXXXXXXXXXXXX----GALPAYLLDREQTTRAKVLSNSIKQKRKEKAGKWDVP 265
GA+PAYL+DRE T RAK++SN+IKQKRKEKAG+WDVP
Sbjct: 61 MKRTIAMHEESTSRRKADDNVQEGAIPAYLMDRENTARAKIISNTIKQKRKEKAGRWDVP 120
Query: 264 LPKVRPVAEDEMFKVVRTGQRKSKQWKRMVTKVTFVGPSFTRKPPKYERFIRPTGLRFSK 85
LPKVRPVAEDEMFKVVRTG+RK+KQWKRMVTK TFVGP FTRKPPKYERFIRPTGLRF+K
Sbjct: 121 LPKVRPVAEDEMFKVVRTGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLRFTK 180
Query: 84 AHVTHPELKCTFNLEIIGIKKNPNGNMY 1
AHVTHPELKCTFNLEIIG+KKNPNG MY
Sbjct: 181 AHVTHPELKCTFNLEIIGVKKNPNGPMY 208
>gb|ABK92490.1| unknown [Populus trichocarpa]
Length = 260
Score = 284 bits (727), Expect = 1e-74
Identities = 142/208 (68%), Positives = 156/208 (75%), Gaps = 7/208 (3%)
Frame = -1
Query: 603 MPQGDYIELHRKRYGYRPDHFERKRKRDAREVHEVSRKAXXXXXXXXXXXXXXXXXXXXX 424
MPQGDYIELHRKR+GYR DHFERKRK++AREVH+ S +A
Sbjct: 1 MPQGDYIELHRKRHGYRLDHFERKRKKEAREVHKHSERAQKALGIKGKMIAKKNYAEKAL 60
Query: 423 XXXXXXXXXXXXXXXX-------GALPAYLLDREQTTRAKVLSNSIKQKRKEKAGKWDVP 265
GA+PAYLLDRE TTRAK+LSNSIKQKRKEKAGKW+VP
Sbjct: 61 MKKTLAMHEESTSRRKVDDDVHDGAIPAYLLDRENTTRAKILSNSIKQKRKEKAGKWEVP 120
Query: 264 LPKVRPVAEDEMFKVVRTGQRKSKQWKRMVTKVTFVGPSFTRKPPKYERFIRPTGLRFSK 85
LPKVRPVAEDEMFKV+R+G+RK+KQWKRMVTK TFVGP FTRKPPKYERFIRPTGLRF+K
Sbjct: 121 LPKVRPVAEDEMFKVIRSGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLRFTK 180
Query: 84 AHVTHPELKCTFNLEIIGIKKNPNGNMY 1
AHVTHPELKCTFNLEIIG+KKNPNG Y
Sbjct: 181 AHVTHPELKCTFNLEIIGVKKNPNGPTY 208
>ref|XP_002323387.1| predicted protein [Populus trichocarpa] gi|222868017|gb|EEF05148.1|
predicted protein [Populus trichocarpa]
Length = 260
Score = 284 bits (726), Expect = 1e-74
Identities = 142/208 (68%), Positives = 156/208 (75%), Gaps = 7/208 (3%)
Frame = -1
Query: 603 MPQGDYIELHRKRYGYRPDHFERKRKRDAREVHEVSRKAXXXXXXXXXXXXXXXXXXXXX 424
MPQGDYIELHRKR+GYR DHFERKRK++AREVH+ S +A
Sbjct: 1 MPQGDYIELHRKRHGYRLDHFERKRKKEAREVHKHSERAQKALGIKGKMIAKKNYAEKAL 60
Query: 423 XXXXXXXXXXXXXXXX-------GALPAYLLDREQTTRAKVLSNSIKQKRKEKAGKWDVP 265
GA+PAYLLDRE TTRAK+LSNSIKQKRKEKAGKW+VP
Sbjct: 61 MKKTLAMHEESTSRRKVDDDVHDGAVPAYLLDRENTTRAKILSNSIKQKRKEKAGKWEVP 120
Query: 264 LPKVRPVAEDEMFKVVRTGQRKSKQWKRMVTKVTFVGPSFTRKPPKYERFIRPTGLRFSK 85
LPKVRPVAEDEMFKV+R+G+RK+KQWKRMVTK TFVGP FTRKPPKYERFIRPTGLRF+K
Sbjct: 121 LPKVRPVAEDEMFKVIRSGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLRFTK 180
Query: 84 AHVTHPELKCTFNLEIIGIKKNPNGNMY 1
AHVTHPELKCTFNLEIIG+KKNPNG Y
Sbjct: 181 AHVTHPELKCTFNLEIIGVKKNPNGPTY 208