BLASTX nr result
ID: Coptis23_contig00001046
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00001046 (608 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004139862.1| PREDICTED: uncharacterized protein LOC101202... 82 1e-13 ref|XP_002326011.1| predicted protein [Populus trichocarpa] gi|2... 78 1e-12 ref|XP_003555422.1| PREDICTED: uncharacterized protein LOC100809... 78 1e-12 ref|NP_174686.1| protein FAB1D [Arabidopsis thaliana] gi|5091620... 71 1e-10 ref|XP_003535550.1| PREDICTED: uncharacterized protein LOC100815... 71 1e-10 >ref|XP_004139862.1| PREDICTED: uncharacterized protein LOC101202759 [Cucumis sativus] gi|449525806|ref|XP_004169907.1| PREDICTED: uncharacterized LOC101202759 [Cucumis sativus] Length = 1517 Score = 81.6 bits (200), Expect = 1e-13 Identities = 58/139 (41%), Positives = 79/139 (56%), Gaps = 20/139 (14%) Frame = -1 Query: 596 ILLKGAHSDALKKIKSVVHSAVVLAYHLILEASFRVDQRAMFLTI------CSAVDDECS 435 ILLKGAHSD LK++K VV AVV+A+HLILE SF VDQRAMF TI +A D S Sbjct: 387 ILLKGAHSDELKRVKIVVQCAVVMAFHLILETSFIVDQRAMFATIPFGGVPATASSDRQS 446 Query: 434 --QEHLPNTCKNAYSANDLSEIASSLTMDIPISEGTSCNSNMDMEQN------------S 297 + PN K A SA+D SE +++ + E TS SNM++ + + Sbjct: 447 PLEPRSPNVGK-AESASDKSEQPTNICISRGSHEETSTGSNMELAEKLIMSSEPEPYNPA 505 Query: 296 AFTGFSNNITSYEKESGQN 240 F+GFS+ S ++ G++ Sbjct: 506 IFSGFSSISDSLKRVMGES 524 >ref|XP_002326011.1| predicted protein [Populus trichocarpa] gi|222862886|gb|EEF00393.1| predicted protein [Populus trichocarpa] Length = 1387 Score = 78.2 bits (191), Expect = 1e-12 Identities = 58/150 (38%), Positives = 83/150 (55%), Gaps = 18/150 (12%) Frame = -1 Query: 608 LGSTILLKGAHSDALKKIKSVVHSAVVLAYHLILEASFRVDQRAMF-------LTICSAV 450 LG TILLKG+HSD LK++K VV AV++AYH+ILE SF VD +AMF + S++ Sbjct: 305 LGCTILLKGSHSDELKRVKYVVQFAVIMAYHMILETSFLVDWKAMFSSEIFGGVVNTSSI 364 Query: 449 DDECSQEHLPNTCKNAYSANDLSEIASSLTMDIPISEG----TSCNSNMDME--QNSAFT 288 D S C +E SS+ +DIPIS G S N N+ +E + + F+ Sbjct: 365 DQHSSALETRIPCVE----ESTTETGSSI-IDIPISNGFHEEGSHNINIGLEGYEPAVFS 419 Query: 287 GFSNNITSYEKESGQNKHI-----HRNMSD 213 GFS+ S +K G + + +R++SD Sbjct: 420 GFSSLSASLKKVMGDSFPLVSSSPYRSLSD 449 >ref|XP_003555422.1| PREDICTED: uncharacterized protein LOC100809696 [Glycine max] Length = 1594 Score = 77.8 bits (190), Expect = 1e-12 Identities = 64/172 (37%), Positives = 84/172 (48%), Gaps = 1/172 (0%) Frame = -1 Query: 608 LGSTILLKGAHSDALKKIKSVVHSAVVLAYHLILEASFRVDQRAMFLTICSAVDDECSQE 429 LG TILLKG HSD LK+IK V+ AVV+AYHLILE SF VDQ+AMF TI + Sbjct: 461 LGCTILLKGTHSDELKRIKCVIRCAVVMAYHLILETSFLVDQKAMFSTIPAV-------- 512 Query: 428 HLPNTCKNAYSANDLSEIASSLTMDIPISEGTSCNSNMDMEQNSAFTGF-SNNITSYEKE 252 +A L D + S NS++ + SA G S +I Sbjct: 513 ----------------SVADILPTDKKSCDSASINSSIPSLEYSAENGIVSTDIPICSGL 556 Query: 251 SGQNKHIHRNMSDDIDDYQLESPRDEAVPTVHLGSVLSAISASVKKVVRDHF 96 +N + S++ + E P + AV S SAIS+S+KKV+ D F Sbjct: 557 HEKNTNGLNLGSEEFSQFSCE-PYNPAV-----FSGFSAISSSLKKVMGDSF 602 >ref|NP_174686.1| protein FAB1D [Arabidopsis thaliana] gi|5091620|gb|AAD39608.1|AC007454_7 Contains similarity to gi|836774 FAB1 protein from Saccharomyces cerevisiae genome gb|D50617 [Arabidopsis thaliana] gi|332193569|gb|AEE31690.1| protein FAB1D [Arabidopsis thaliana] Length = 1456 Score = 71.2 bits (173), Expect = 1e-10 Identities = 46/122 (37%), Positives = 65/122 (53%), Gaps = 5/122 (4%) Frame = -1 Query: 608 LGSTILLKGAHSDALKKIKSVVHSAVVLAYHLILEASFRVDQRAMFLTICSAVDDECSQE 429 LG TILLKG HS+ LKK+K VV + +LAYHL+LEASF D+ MF TI + C E Sbjct: 387 LGCTILLKGCHSERLKKVKEVVQYSFILAYHLMLEASFLADRHTMFSTIFAKEATSCVVE 446 Query: 428 HLPNTCKNAYSANDLSEIASSLTMDIPISEG-----TSCNSNMDMEQNSAFTGFSNNITS 264 + N +S + + S +DIP+S G N D E+ + +++ S Sbjct: 447 -IEN-----FSPSPSPRESPSEAVDIPVSNGFDEQTIQINGEADGEKVGTWESDGDHVFS 500 Query: 263 YE 258 +E Sbjct: 501 HE 502 >ref|XP_003535550.1| PREDICTED: uncharacterized protein LOC100815340 [Glycine max] Length = 1541 Score = 71.2 bits (173), Expect = 1e-10 Identities = 56/141 (39%), Positives = 73/141 (51%), Gaps = 22/141 (15%) Frame = -1 Query: 596 ILLKGAHSDALKKIKSVVHSAVVLAYHLILEASFRVDQRAMFLTICSAVDDECSQEHLPN 417 ILLKG HSD LK+IK V+ AVV+AYHLILE SF VDQ+AMF TI + + LP Sbjct: 405 ILLKGTHSDELKRIKCVMRCAVVMAYHLILETSFLVDQKAMFSTIPAV----SVADILPT 460 Query: 416 TCKNAYSANDLSEIAS--------SLTMDIPISEGTSCNS----NMDMEQNS-------- 297 K+ A+ S I S ++ DIPI G N+ N+ E+ S Sbjct: 461 DKKSCDLASTNSSIPSLEYSAENGIVSTDIPICNGLHENNINGLNLGSEEFSPFSCEPYN 520 Query: 296 --AFTGFSNNITSYEKESGQN 240 F+GFS +S +K G + Sbjct: 521 PAVFSGFSAISSSLKKVMGDS 541