BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001040
         (1420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529466.1| Aspartate carbamoyltransferase 2, chloroplas...   573   e-161
ref|XP_002300331.1| predicted protein [Populus trichocarpa] gi|2...   560   e-157
ref|XP_002277415.2| PREDICTED: aspartate carbamoyltransferase 2,...   559   e-157
sp|Q43064.1|PYRB3_PEA RecName: Full=Aspartate carbamoyltransfera...   559   e-157
sp|Q43087.1|PYRB2_PEA RecName: Full=Aspartate carbamoyltransfera...   556   e-156

>ref|XP_002529466.1| Aspartate carbamoyltransferase 2, chloroplast precursor, putative
            [Ricinus communis] gi|223531082|gb|EEF32932.1| Aspartate
            carbamoyltransferase 2, chloroplast precursor, putative
            [Ricinus communis]
          Length = 360

 Score =  573 bits (1478), Expect = e-161
 Identities = 293/339 (86%), Positives = 316/339 (93%)
 Frame = -3

Query: 1130 LLLSRTQCHALETEKVLNTDKAFSFSAGDKFQLQDILDAQQFDRDILNAIFKVARQMEDI 951
            L+ S  +C ALE   + N D    FS G++FQL+D+++AQQFDR+ILNAIF+VAR+ME I
Sbjct: 27   LIRSGVRCSALE---IGNAD--LLFSTGNRFQLEDVIEAQQFDREILNAIFEVAREMEKI 81

Query: 950  EKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLE 771
            EKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLE
Sbjct: 82   EKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLE 141

Query: 770  DTIRTVEGYSDIIVIRHFESGAARRAAVTAGIPVINAGDGPGQHPSQALLDVYTIGREIG 591
            DTIRTVEGYSDIIV+RHFESGAARRAA TA IPVINAGDGPGQHP+QALLDVYTI REIG
Sbjct: 142  DTIRTVEGYSDIIVMRHFESGAARRAATTACIPVINAGDGPGQHPTQALLDVYTIDREIG 201

Query: 590  KLDGIKVGLVGDLANGRTVRSLAYLLSKYQNVKIYFVAPDVVKMKDDIKDYLTSKGVEWE 411
            KLDGIKV LVGDLANGRTVRSLAYLL+KYQ+VKIYFV+PDVVKMKDDIKDYL S+GVEWE
Sbjct: 202  KLDGIKVALVGDLANGRTVRSLAYLLAKYQDVKIYFVSPDVVKMKDDIKDYLASRGVEWE 261

Query: 410  ESTDLMEVASECDVVYQTRIQRERFGERIDLYEQARGKYIVDNKVLSVMQKHAIVMHPLP 231
            ES DLMEVAS+CDVVYQTRIQRERFGERIDLYE+ARGKYIVD+ VL+VMQKHA+VMHPLP
Sbjct: 262  ESADLMEVASKCDVVYQTRIQRERFGERIDLYEEARGKYIVDSDVLNVMQKHAVVMHPLP 321

Query: 230  RLDEITVDVDSDPRAAYFRQAKNGLYIRMALLKLLLVGW 114
            RLDEITVDVD DPRAAYFRQAKNGLYIRMALLKLLLVGW
Sbjct: 322  RLDEITVDVDVDPRAAYFRQAKNGLYIRMALLKLLLVGW 360


>ref|XP_002300331.1| predicted protein [Populus trichocarpa] gi|222847589|gb|EEE85136.1|
            predicted protein [Populus trichocarpa]
          Length = 332

 Score =  560 bits (1442), Expect = e-157
 Identities = 280/325 (86%), Positives = 305/325 (93%)
 Frame = -3

Query: 1088 KVLNTDKAFSFSAGDKFQLQDILDAQQFDRDILNAIFKVARQMEDIEKNSPGSQILKGYL 909
            ++L      SFSAG KFQL D+++AQQFDR+IL  IF+VA +ME +EKNSPGSQ+LKGYL
Sbjct: 8    QLLGIQNTPSFSAGKKFQLDDLIEAQQFDREILADIFEVAHEMEKVEKNSPGSQVLKGYL 67

Query: 908  MATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLEDTIRTVEGYSDIIV 729
            MATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLEDTIRTVEGYSDIIV
Sbjct: 68   MATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLEDTIRTVEGYSDIIV 127

Query: 728  IRHFESGAARRAAVTAGIPVINAGDGPGQHPSQALLDVYTIGREIGKLDGIKVGLVGDLA 549
            +RHFESGAA+RAA TA +PVINAGDGPGQHP+QALLDVYTI REIGKLDGIKV LVGDLA
Sbjct: 128  MRHFESGAAKRAAATAEVPVINAGDGPGQHPTQALLDVYTIDREIGKLDGIKVALVGDLA 187

Query: 548  NGRTVRSLAYLLSKYQNVKIYFVAPDVVKMKDDIKDYLTSKGVEWEESTDLMEVASECDV 369
            NGRTVRSLAYLL+KYQ+VKIYFV+PDVVKMKDDIKDYLTSK VEWEES DLMEVAS+CDV
Sbjct: 188  NGRTVRSLAYLLAKYQDVKIYFVSPDVVKMKDDIKDYLTSKRVEWEESADLMEVASKCDV 247

Query: 368  VYQTRIQRERFGERIDLYEQARGKYIVDNKVLSVMQKHAIVMHPLPRLDEITVDVDSDPR 189
            +YQTRIQRERFG+RIDLYE+ARGKYIVD+ VL+VMQ HA+VMHPLPRLDEITVDVD+DPR
Sbjct: 248  LYQTRIQRERFGKRIDLYEEARGKYIVDHDVLNVMQNHAVVMHPLPRLDEITVDVDADPR 307

Query: 188  AAYFRQAKNGLYIRMALLKLLLVGW 114
            AAYFRQAKNGLYIRMALLKLLLVGW
Sbjct: 308  AAYFRQAKNGLYIRMALLKLLLVGW 332


>ref|XP_002277415.2| PREDICTED: aspartate carbamoyltransferase 2, chloroplastic-like
            [Vitis vinifera]
          Length = 403

 Score =  559 bits (1441), Expect = e-157
 Identities = 280/315 (88%), Positives = 300/315 (95%)
 Frame = -3

Query: 1058 FSAGDKFQLQDILDAQQFDRDILNAIFKVARQMEDIEKNSPGSQILKGYLMATLFYEPST 879
            FS G+KFQL D+++AQQFDR+ L+AIF+VAR+ME +EK SPGSQILKGYLMATLFYEPST
Sbjct: 89   FSVGNKFQLDDVIEAQQFDRETLSAIFEVAREMEKVEKKSPGSQILKGYLMATLFYEPST 148

Query: 878  RTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLEDTIRTVEGYSDIIVIRHFESGAAR 699
            RTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLEDTIRTVEGYSDIIV+RHFESGAAR
Sbjct: 149  RTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLEDTIRTVEGYSDIIVMRHFESGAAR 208

Query: 698  RAAVTAGIPVINAGDGPGQHPSQALLDVYTIGREIGKLDGIKVGLVGDLANGRTVRSLAY 519
            RAAVTA IP+INAGDGPGQHP+QALLDVYTI REIG+LD IKVGLVGDLANGRTVRSLAY
Sbjct: 209  RAAVTAEIPIINAGDGPGQHPTQALLDVYTIEREIGRLDRIKVGLVGDLANGRTVRSLAY 268

Query: 518  LLSKYQNVKIYFVAPDVVKMKDDIKDYLTSKGVEWEESTDLMEVASECDVVYQTRIQRER 339
            LL+KYQ+VKIYFV+P+VVKMKDDIKDYLTSKGVEWEES DLMEVAS+CDVVYQTRIQRER
Sbjct: 269  LLAKYQDVKIYFVSPEVVKMKDDIKDYLTSKGVEWEESADLMEVASKCDVVYQTRIQRER 328

Query: 338  FGERIDLYEQARGKYIVDNKVLSVMQKHAIVMHPLPRLDEITVDVDSDPRAAYFRQAKNG 159
            FGER DLYE+ARGKYIVD  VL VMQKHA+VMHPLPRLDEITVDVD D RAAYFRQAKNG
Sbjct: 329  FGERADLYEEARGKYIVDRDVLGVMQKHAVVMHPLPRLDEITVDVDEDQRAAYFRQAKNG 388

Query: 158  LYIRMALLKLLLVGW 114
            LYIRMALLKLLLVGW
Sbjct: 389  LYIRMALLKLLLVGW 403


>sp|Q43064.1|PYRB3_PEA RecName: Full=Aspartate carbamoyltransferase 3, chloroplastic;
            AltName: Full=Aspartate transcarbamylase 3; Short=ATCase
            3; Flags: Precursor gi|609344|gb|AAB67857.1| aspartate
            carbamoyltransferase [Pisum sativum]
          Length = 391

 Score =  559 bits (1441), Expect = e-157
 Identities = 282/359 (78%), Positives = 322/359 (89%), Gaps = 5/359 (1%)
 Frame = -3

Query: 1175 SQVSMSSFSTLTSEKLLLSRTQC--HALETEKVLNT---DKAFSFSAGDKFQLQDILDAQ 1011
            S++S    + L S    +SR  C  +  + +K++ T   D    FS G KFQL D+++AQ
Sbjct: 33   SKISYVETNYLKSTCYPISRFLCINNLSKCDKMIKTRQRDGIHCFSEGQKFQLDDVIEAQ 92

Query: 1010 QFDRDILNAIFKVARQMEDIEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGE 831
            QFDRDILNAIF++AR ME+IE+NSP SQILKGYLMATLFYEPSTRTRLSFESAM+RLGGE
Sbjct: 93   QFDRDILNAIFEIARDMENIERNSPESQILKGYLMATLFYEPSTRTRLSFESAMRRLGGE 152

Query: 830  VLTTENAREFSSAAKGETLEDTIRTVEGYSDIIVIRHFESGAARRAAVTAGIPVINAGDG 651
            VLTTENAREFSSAAKGETLEDTIRTVEGYSD+IV+RHFESGAARRAA  AGIP++NAGDG
Sbjct: 153  VLTTENAREFSSAAKGETLEDTIRTVEGYSDLIVLRHFESGAARRAAAIAGIPIVNAGDG 212

Query: 650  PGQHPSQALLDVYTIGREIGKLDGIKVGLVGDLANGRTVRSLAYLLSKYQNVKIYFVAPD 471
            PGQHPSQALLDVYTI REIGKLDGIKVGLVGDLANGRTVRSLAYLL+KY++VKIYFV+P+
Sbjct: 213  PGQHPSQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYKDVKIYFVSPE 272

Query: 470  VVKMKDDIKDYLTSKGVEWEESTDLMEVASECDVVYQTRIQRERFGERIDLYEQARGKYI 291
            VVKMKDDIKDYLTSKGV+WEES+DL+EVASECDVVYQTRIQ+ERFGER+DLYE+ARGK+I
Sbjct: 273  VVKMKDDIKDYLTSKGVDWEESSDLVEVASECDVVYQTRIQKERFGERLDLYEKARGKFI 332

Query: 290  VDNKVLSVMQKHAIVMHPLPRLDEITVDVDSDPRAAYFRQAKNGLYIRMALLKLLLVGW 114
            V+  +L+ MQ+HA++MHPLPRLDEITVDVD+DPRAAYFRQAK GLYIRMALLKLLLVGW
Sbjct: 333  VNQNILNAMQRHAVIMHPLPRLDEITVDVDADPRAAYFRQAKYGLYIRMALLKLLLVGW 391


>sp|Q43087.1|PYRB2_PEA RecName: Full=Aspartate carbamoyltransferase 2, chloroplastic;
            AltName: Full=Aspartate transcarbamylase 2; Short=ATCase
            2; Flags: Precursor gi|495661|gb|AAA62444.1| aspartate
            transcarbamoylase [Pisum sativum]
          Length = 385

 Score =  556 bits (1434), Expect = e-156
 Identities = 281/354 (79%), Positives = 315/354 (88%)
 Frame = -3

Query: 1175 SQVSMSSFSTLTSEKLLLSRTQCHALETEKVLNTDKAFSFSAGDKFQLQDILDAQQFDRD 996
            S++S    + L S    +SR  C     +K    D    FS G KFQL D+++AQQFDRD
Sbjct: 33   SKISYVETNYLKSTCYPISRFFC-INNLKKTRQRDGIHCFSEGQKFQLDDVVEAQQFDRD 91

Query: 995  ILNAIFKVARQMEDIEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTE 816
            ILNAIF+VAR ME IE+NSP SQILKGYLMATLFYEPSTRTRLSFESAM+RLGGEVLTTE
Sbjct: 92   ILNAIFEVARDMEKIERNSPESQILKGYLMATLFYEPSTRTRLSFESAMRRLGGEVLTTE 151

Query: 815  NAREFSSAAKGETLEDTIRTVEGYSDIIVIRHFESGAARRAAVTAGIPVINAGDGPGQHP 636
            NAREFSSAAKGETLEDTIRTVEGYSD+IV+RHFESGAARRAA  AGIP++NAGDGPGQHP
Sbjct: 152  NAREFSSAAKGETLEDTIRTVEGYSDLIVLRHFESGAARRAATIAGIPIVNAGDGPGQHP 211

Query: 635  SQALLDVYTIGREIGKLDGIKVGLVGDLANGRTVRSLAYLLSKYQNVKIYFVAPDVVKMK 456
            SQALLDVYTI REIGKLDGIKVGLVGDLANGRTVRSL YLL+KY++VKIYFV+P+VVKMK
Sbjct: 212  SQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLTYLLAKYKDVKIYFVSPEVVKMK 271

Query: 455  DDIKDYLTSKGVEWEESTDLMEVASECDVVYQTRIQRERFGERIDLYEQARGKYIVDNKV 276
            DDIKDYLTSKGV+WEES+DL+EVASECDVVYQTRIQ+ERFGER+DLYE+ARGK+IV+  +
Sbjct: 272  DDIKDYLTSKGVDWEESSDLVEVASECDVVYQTRIQKERFGERLDLYEKARGKFIVNQNI 331

Query: 275  LSVMQKHAIVMHPLPRLDEITVDVDSDPRAAYFRQAKNGLYIRMALLKLLLVGW 114
            L+ MQ+HA++MHPLPRLDEITVDVD+DPRAAYFRQAK GLYIRMALLKLLLVGW
Sbjct: 332  LNAMQRHAVIMHPLPRLDEITVDVDADPRAAYFRQAKYGLYIRMALLKLLLVGW 385