BLASTX nr result
ID: Coptis23_contig00001033
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00001033
(2167 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272810.2| PREDICTED: protein MID1-COMPLEMENTING ACTIVI... 679 0.0
ref|XP_004146155.1| PREDICTED: protein MID1-COMPLEMENTING ACTIVI... 656 0.0
ref|XP_004159726.1| PREDICTED: LOW QUALITY PROTEIN: protein MID1... 654 0.0
ref|XP_002327738.1| predicted protein [Populus trichocarpa] gi|2... 652 0.0
dbj|BAK32933.1| mid1-complementing activity 2 [Nicotiana tabacum] 639 e-180
>ref|XP_002272810.2| PREDICTED: protein MID1-COMPLEMENTING ACTIVITY 1-like [Vitis
vinifera]
Length = 420
Score = 679 bits (1752), Expect = 0.0
Identities = 335/421 (79%), Positives = 376/421 (89%), Gaps = 5/421 (1%)
Frame = +2
Query: 320 ASWEHFGELANVAQLTGVDAVRLIGMIVKAAATARMHKKNCRQFAMHLKLIGNLLEQLRI 499
A+WEHFGE+ANVAQLTGVDAVRLIGMIV AA TARMHKKNCRQFA HLKLIGNLLEQL+I
Sbjct: 2 ATWEHFGEIANVAQLTGVDAVRLIGMIVSAANTARMHKKNCRQFAQHLKLIGNLLEQLKI 61
Query: 500 SELKRYPETREPLEQLEDALRRSYVLVNSCQDRSYLYLLAMGWNIVYHFRRAQEEIDRYL 679
SELKRYPE REPLEQLED+LRR Y+LVNSCQDRSYLYLLAMGWNIVY FR+AQ EIDRYL
Sbjct: 62 SELKRYPEMREPLEQLEDSLRRGYILVNSCQDRSYLYLLAMGWNIVYQFRKAQNEIDRYL 121
Query: 680 RLVPLITLVDNARVKERLEYIERDQHEYTLDEEDRQVQTVILKPEPSTNDTMVLKKSLSC 859
+++PLITLVDNARV+ERLE IE+DQ EYTLD+ED++VQ VILKPEPSTNDT+VLKK+LSC
Sbjct: 122 KIIPLITLVDNARVRERLEDIEKDQREYTLDDEDKRVQDVILKPEPSTNDTVVLKKTLSC 181
Query: 860 SY-NLPIDKALRKENERLQMELQMSQANMDVGQCQVIQHLLDVTES-AACSLPEKGSPLK 1033
SY NLP + AL+KENE+LQ+ELQ SQAN DV QC+VIQHL+ VTE+ AA S+PEK P++
Sbjct: 182 SYPNLPFNAALKKENEKLQLELQRSQANYDVDQCEVIQHLIGVTEAVAANSVPEKNLPVR 241
Query: 1034 SSKKVEEFNHSDDNDDKVHTFER---KQSGTRAPPSRNTSSVSSGDDLLSTKGSHRHEEW 1204
SSKK E ++SD N DK ++ + K+S TR SRN SSVSSG DLLST+GSHRHEEW
Sbjct: 242 SSKKAES-DYSDANSDKEYSVDESYPKRSDTRT-ASRNISSVSSGHDLLSTRGSHRHEEW 299
Query: 1205 HTDLLGCCSEPSLCFKTFFYPCGTFSKIATVATNRHMSPAEACNDLMAYSLILACCCHTC 1384
H+DLLGCCSEPSLC KTFFYPCGTFSKIA+VATNRHMS AEACN+LMAYS+IL+CCC+TC
Sbjct: 300 HSDLLGCCSEPSLCIKTFFYPCGTFSKIASVATNRHMSSAEACNELMAYSMILSCCCYTC 359
Query: 1385 CIRRKLRKTLNITGGFCDDFLSHLLCCCCALVQEWREVEIRGVYGPEKTKTSPPTSQYME 1564
CIRRKLR LNITGG DDFLSHL+CCCCALVQEWREVEIRGVYGPEKT+TSPP SQYME
Sbjct: 360 CIRRKLRNMLNITGGLFDDFLSHLMCCCCALVQEWREVEIRGVYGPEKTRTSPPPSQYME 419
Query: 1565 S 1567
S
Sbjct: 420 S 420
>ref|XP_004146155.1| PREDICTED: protein MID1-COMPLEMENTING ACTIVITY 1-like [Cucumis
sativus]
Length = 418
Score = 656 bits (1692), Expect = 0.0
Identities = 325/422 (77%), Positives = 370/422 (87%), Gaps = 6/422 (1%)
Frame = +2
Query: 320 ASWEHFGELANVAQLTGVDAVRLIGMIVKAAATARMHKKNCRQFAMHLKLIGNLLEQLRI 499
+SWE GE+ANVAQLTG+DAVRLI MIVK+A+TARMHKKNCRQFA HLKLIGNLLEQL+I
Sbjct: 2 SSWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHKKNCRQFAQHLKLIGNLLEQLKI 61
Query: 500 SELKRYPETREPLEQLEDALRRSYVLVNSCQDRSYLYLLAMGWNIVYHFRRAQEEIDRYL 679
SELKRYPETREPLEQLE+ALRRSY+LVNSCQDRSYLYLLAMGWNIVY FR+AQ EIDRYL
Sbjct: 62 SELKRYPETREPLEQLEEALRRSYILVNSCQDRSYLYLLAMGWNIVYQFRKAQNEIDRYL 121
Query: 680 RLVPLITLVDNARVKERLEYIERDQHEYTLDEEDRQVQTVILKPEPSTNDTMVLKKSLSC 859
RLVPLITLVDNARV+ERLE IE+DQ EYTLD++D+++ VIL PEPS ++ MVLKKSLSC
Sbjct: 122 RLVPLITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAMVLKKSLSC 181
Query: 860 SY-NLPIDKALRKENERLQMELQMSQANMDVGQCQVIQHLLDVTES-AACSLPEKGSPLK 1033
SY NLP +KAL+KENE+LQ+ELQ SQAN++VG+C+VIQ L+DVTES AA SLPEK SP K
Sbjct: 182 SYPNLPFNKALQKENEKLQLELQRSQANLNVGECEVIQRLIDVTESVAATSLPEKNSPEK 241
Query: 1034 SSKKVE----EFNHSDDNDDKVHTFERKQSGTRAPPSRNTSSVSSGDDLLSTKGSHRHEE 1201
S K VE + N+ D +D+ H ++ + T SR +SSVSSG DLLST+GS R+ E
Sbjct: 242 SHKVVEKTYVDANNGDSSDE--HFYKNTDART---TSRKSSSVSSGHDLLSTRGSDRYGE 296
Query: 1202 WHTDLLGCCSEPSLCFKTFFYPCGTFSKIATVATNRHMSPAEACNDLMAYSLILACCCHT 1381
WHTDLL CCSEPSLC KTFFYPCGT S+IATVAT+RH SPAEACNDLMAY+LIL+CCC+T
Sbjct: 297 WHTDLLDCCSEPSLCLKTFFYPCGTLSRIATVATSRHTSPAEACNDLMAYTLILSCCCYT 356
Query: 1382 CCIRRKLRKTLNITGGFCDDFLSHLLCCCCALVQEWREVEIRGVYGPEKTKTSPPTSQYM 1561
CC+RRKLRK LNITGGF DDFLSHL+CCCCALVQEWREVEIRGVYGPEKTKTSPP SQYM
Sbjct: 357 CCVRRKLRKMLNITGGFVDDFLSHLMCCCCALVQEWREVEIRGVYGPEKTKTSPPPSQYM 416
Query: 1562 ES 1567
E+
Sbjct: 417 ET 418
>ref|XP_004159726.1| PREDICTED: LOW QUALITY PROTEIN: protein MID1-COMPLEMENTING ACTIVITY
1-like [Cucumis sativus]
Length = 418
Score = 654 bits (1686), Expect = 0.0
Identities = 324/422 (76%), Positives = 369/422 (87%), Gaps = 6/422 (1%)
Frame = +2
Query: 320 ASWEHFGELANVAQLTGVDAVRLIGMIVKAAATARMHKKNCRQFAMHLKLIGNLLEQLRI 499
+SWE GE+ANVAQLTG+DAVRLI MIVK+A+TARMH KNCRQFA HLKLIGNLLEQL+I
Sbjct: 2 SSWETLGEIANVAQLTGIDAVRLISMIVKSASTARMHXKNCRQFAQHLKLIGNLLEQLKI 61
Query: 500 SELKRYPETREPLEQLEDALRRSYVLVNSCQDRSYLYLLAMGWNIVYHFRRAQEEIDRYL 679
SELKRYPETREPLEQLE+ALRRSY+LVNSCQDRSYLYLLAMGWNIVY FR+AQ EIDRYL
Sbjct: 62 SELKRYPETREPLEQLEEALRRSYILVNSCQDRSYLYLLAMGWNIVYQFRKAQNEIDRYL 121
Query: 680 RLVPLITLVDNARVKERLEYIERDQHEYTLDEEDRQVQTVILKPEPSTNDTMVLKKSLSC 859
RLVPLITLVDNARV+ERLE IE+DQ EYTLD++D+++ VIL PEPS ++ MVLKKSLSC
Sbjct: 122 RLVPLITLVDNARVRERLEDIEKDQREYTLDDDDKRIHEVILNPEPSKDEAMVLKKSLSC 181
Query: 860 SY-NLPIDKALRKENERLQMELQMSQANMDVGQCQVIQHLLDVTES-AACSLPEKGSPLK 1033
SY NLP +KAL+KENE+LQ+ELQ SQAN++VG+C+VIQ L+DVTES AA SLPEK SP K
Sbjct: 182 SYPNLPFNKALQKENEKLQLELQRSQANLNVGECEVIQRLIDVTESVAATSLPEKNSPEK 241
Query: 1034 SSKKVE----EFNHSDDNDDKVHTFERKQSGTRAPPSRNTSSVSSGDDLLSTKGSHRHEE 1201
S K VE + N+ D +D+ H ++ + T SR +SSVSSG DLLST+GS R+ E
Sbjct: 242 SHKVVEKTYVDANNGDSSDE--HFYKNTDART---TSRKSSSVSSGHDLLSTRGSDRYGE 296
Query: 1202 WHTDLLGCCSEPSLCFKTFFYPCGTFSKIATVATNRHMSPAEACNDLMAYSLILACCCHT 1381
WHTDLL CCSEPSLC KTFFYPCGT S+IATVAT+RH SPAEACNDLMAY+LIL+CCC+T
Sbjct: 297 WHTDLLDCCSEPSLCLKTFFYPCGTLSRIATVATSRHTSPAEACNDLMAYTLILSCCCYT 356
Query: 1382 CCIRRKLRKTLNITGGFCDDFLSHLLCCCCALVQEWREVEIRGVYGPEKTKTSPPTSQYM 1561
CC+RRKLRK LNITGGF DDFLSHL+CCCCALVQEWREVEIRGVYGPEKTKTSPP SQYM
Sbjct: 357 CCVRRKLRKMLNITGGFVDDFLSHLMCCCCALVQEWREVEIRGVYGPEKTKTSPPPSQYM 416
Query: 1562 ES 1567
E+
Sbjct: 417 ET 418
>ref|XP_002327738.1| predicted protein [Populus trichocarpa] gi|222836823|gb|EEE75216.1|
predicted protein [Populus trichocarpa]
Length = 419
Score = 652 bits (1683), Expect = 0.0
Identities = 324/420 (77%), Positives = 369/420 (87%), Gaps = 4/420 (0%)
Frame = +2
Query: 320 ASWEHFGELANVAQLTGVDAVRLIGMIVKAAATARMHKKNCRQFAMHLKLIGNLLEQLRI 499
A+WEH GE+ANV QLTG+DAVRLI MI KAA TARMHKKNCRQFA HLKLIGNLLEQL+I
Sbjct: 2 ATWEHLGEVANVVQLTGIDAVRLIAMIGKAATTARMHKKNCRQFAQHLKLIGNLLEQLKI 61
Query: 500 SELKRYPETREPLEQLEDALRRSYVLVNSCQDRSYLYLLAMGWNIVYHFRRAQEEIDRYL 679
SELKRYPETREPLEQLEDALRRSY+LVNSCQDRSYLYLLAMGWNIVY FR+AQ EIDRYL
Sbjct: 62 SELKRYPETREPLEQLEDALRRSYLLVNSCQDRSYLYLLAMGWNIVYQFRKAQNEIDRYL 121
Query: 680 RLVPLITLVDNARVKERLEYIERDQHEYTLDEEDRQVQTVILKPEPSTNDTMVLKKSLSC 859
RLVPLITLVDN+RV+ERLEYIERDQ EYTLD+EDR+VQ VILKP+ S T +LKK+LSC
Sbjct: 122 RLVPLITLVDNSRVRERLEYIERDQREYTLDDEDRRVQDVILKPDCSGEHTTMLKKTLSC 181
Query: 860 SY-NLPIDKALRKENERLQMELQMSQANMDVGQCQVIQHLLDVTE-SAACSLPEKGSPLK 1033
SY N+ ++ALRKENE+LQ+ELQ SQA++DV QC+VIQHL++VTE +AA SLPEK S K
Sbjct: 182 SYPNMCFNEALRKENEKLQLELQRSQAHLDVNQCEVIQHLIEVTEVAAASSLPEKSSSTK 241
Query: 1034 SSKKVEEFNHSDDNDDKVHTFERKQS--GTRAPPSRNTSSVSSGDDLLSTKGSHRHEEWH 1207
SSKK+E +SD +++K H+F+ S SRNTSSVSS DDLLS++GSH+ EEWH
Sbjct: 242 SSKKLEP-AYSDASENK-HSFDDSYSTKSDSHKTSRNTSSVSSRDDLLSSRGSHQQEEWH 299
Query: 1208 TDLLGCCSEPSLCFKTFFYPCGTFSKIATVATNRHMSPAEACNDLMAYSLILACCCHTCC 1387
DLLGCCSEP LC KT FYPCGTF+KIATVA NRH+S AEACN+LMAYS++L+CCC+TCC
Sbjct: 300 ADLLGCCSEPYLCIKTLFYPCGTFAKIATVAKNRHISSAEACNELMAYSMMLSCCCYTCC 359
Query: 1388 IRRKLRKTLNITGGFCDDFLSHLLCCCCALVQEWREVEIRGVYGPEKTKTSPPTSQYMES 1567
+RR+LRKTLNITGGF DDFLSHL+CCCCALVQEWREVEIRGVYGPEKTKTSPP SQ+MES
Sbjct: 360 VRRELRKTLNITGGFIDDFLSHLMCCCCALVQEWREVEIRGVYGPEKTKTSPPPSQFMES 419
>dbj|BAK32933.1| mid1-complementing activity 2 [Nicotiana tabacum]
Length = 419
Score = 639 bits (1647), Expect = e-180
Identities = 310/418 (74%), Positives = 361/418 (86%), Gaps = 2/418 (0%)
Frame = +2
Query: 320 ASWEHFGELANVAQLTGVDAVRLIGMIVKAAATARMHKKNCRQFAMHLKLIGNLLEQLRI 499
ASWEHFGE+ANVAQLTG+DAVRLIGMIVKAA TARMHKKNCRQFA HLKLIG+LLEQL+I
Sbjct: 2 ASWEHFGEIANVAQLTGIDAVRLIGMIVKAATTARMHKKNCRQFAQHLKLIGSLLEQLKI 61
Query: 500 SELKRYPETREPLEQLEDALRRSYVLVNSCQDRSYLYLLAMGWNIVYHFRRAQEEIDRYL 679
+ELKRYPETREPLEQLEDALRRSY+LV SCQDRSYLYLLAMGWNIVY FRRAQ EID+YL
Sbjct: 62 TELKRYPETREPLEQLEDALRRSYILVKSCQDRSYLYLLAMGWNIVYQFRRAQNEIDQYL 121
Query: 680 RLVPLITLVDNARVKERLEYIERDQHEYTLDEEDRQVQTVILKPEPSTNDTMVLKKSLSC 859
+++PLITLVDNARV+ERLE+IERDQHEYTL+ ED +VQ VI+KPEPS +DT++L K+LSC
Sbjct: 122 KIIPLITLVDNARVRERLEFIERDQHEYTLEAEDMKVQEVIMKPEPSKDDTIILTKNLSC 181
Query: 860 SY-NLPIDKALRKENERLQMELQMSQANMDVGQCQVIQHLLDVTESAAC-SLPEKGSPLK 1033
SY +PI++A++KENE+LQ+ELQ SQAN+DVGQC+ IQHLLDVTE A SL K SP+K
Sbjct: 182 SYPRVPINEAIKKENEKLQLELQRSQANLDVGQCEFIQHLLDVTEVVATNSLSLKSSPIK 241
Query: 1034 SSKKVEEFNHSDDNDDKVHTFERKQSGTRAPPSRNTSSVSSGDDLLSTKGSHRHEEWHTD 1213
KK++E + D+ + ++ + SRN SSVSS +LLS+KGSHR+EEWH+D
Sbjct: 242 PPKKLDESYSNVDSYTDHYVESYAKNDEKQATSRNASSVSSKHELLSSKGSHRYEEWHSD 301
Query: 1214 LLGCCSEPSLCFKTFFYPCGTFSKIATVATNRHMSPAEACNDLMAYSLILACCCHTCCIR 1393
LLGCCSEP LC KT F+PCGTFSK+A+VA +RH+S AEACN+LMAYSLIL+CCC+TCCIR
Sbjct: 302 LLGCCSEPLLCIKTVFFPCGTFSKVASVAADRHISSAEACNELMAYSLILSCCCYTCCIR 361
Query: 1394 RKLRKTLNITGGFCDDFLSHLLCCCCALVQEWREVEIRGVYGPEKTKTSPPTSQYMES 1567
RKLRK LNI GGF DDFLSHL+CCCCALVQEWREVEIRG +G EKTK PPTSQ MES
Sbjct: 362 RKLRKKLNIMGGFVDDFLSHLMCCCCALVQEWREVEIRGTHGLEKTKVRPPTSQLMES 419