BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001026
         (944 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271632.1| PREDICTED: 40S ribosomal protein S6 isoform ...   373   e-101
ref|XP_002285752.1| PREDICTED: 40S ribosomal protein S6 [Vitis v...   368   1e-99
sp|Q9M3V8.1|RS6_ASPOF RecName: Full=40S ribosomal protein S6 gi|...   367   2e-99
ref|XP_002273865.1| PREDICTED: 40S ribosomal protein S6 isoform ...   367   2e-99
gb|ABK24202.1| unknown [Picea sitchensis]                             366   4e-99

>ref|XP_002271632.1| PREDICTED: 40S ribosomal protein S6 isoform 1 [Vitis vinifera]
           gi|296087487|emb|CBI34076.3| unnamed protein product
           [Vitis vinifera]
          Length = 249

 Score =  373 bits (957), Expect = e-101
 Identities = 189/222 (85%), Positives = 198/222 (89%)
 Frame = -2

Query: 943 EIDDDQKLRAFYDKRISQEVNGDALGEEFRGYVFKIMGGCDKQGFPMKQGVLTPGRVRLL 764
           EIDDDQKLRAFYDKRISQEVNGDALGEEF+GYVFKIMGGCDKQGFPMKQGVLTPGRV LL
Sbjct: 17  EIDDDQKLRAFYDKRISQEVNGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVSLL 76

Query: 763 LHRGTPCFXXXXXXXXXXXXXXXXGCIVSQDLSVLNLVIVKKGEDDLPGLTDTERPRMRG 584
           LHRGTPCF                GCIVSQDLSVLNLVIVKKGE DLPGLTDTE+PRMRG
Sbjct: 77  LHRGTPCFRGYGRRNGERRRKAVRGCIVSQDLSVLNLVIVKKGESDLPGLTDTEKPRMRG 136

Query: 583 PKRASNIRRLFNLSKEDDVRKYVNTYRRNFTNKAGKKCSKAPKIQRLVTPLTLQRKRSRI 404
           PKRAS IR+LFNLSKEDDVRKYVNTYRR FT K+GKKCSKAPKIQRLVTPLTLQRKR+RI
Sbjct: 137 PKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRARI 196

Query: 403 AEKKNRVAKAKSEAADYLKLLATRAKEQKERRSESLAKKRSR 278
           AEKK R+AKAKSEAA+Y KLLATR KEQ+ERRSESLAK+RSR
Sbjct: 197 AEKKKRIAKAKSEAAEYQKLLATRLKEQRERRSESLAKRRSR 238


>ref|XP_002285752.1| PREDICTED: 40S ribosomal protein S6 [Vitis vinifera]
           gi|302141988|emb|CBI19191.3| unnamed protein product
           [Vitis vinifera]
          Length = 249

 Score =  368 bits (944), Expect = 1e-99
 Identities = 186/222 (83%), Positives = 198/222 (89%)
 Frame = -2

Query: 943 EIDDDQKLRAFYDKRISQEVNGDALGEEFRGYVFKIMGGCDKQGFPMKQGVLTPGRVRLL 764
           EIDDDQKLRAF+DKRISQEV+GDALGEEF GYVFKIMGGCDKQGFPMKQGVLTPGRV LL
Sbjct: 17  EIDDDQKLRAFFDKRISQEVSGDALGEEFNGYVFKIMGGCDKQGFPMKQGVLTPGRVSLL 76

Query: 763 LHRGTPCFXXXXXXXXXXXXXXXXGCIVSQDLSVLNLVIVKKGEDDLPGLTDTERPRMRG 584
           LHRGTPCF                GCIVSQDLSVLNLVIVKKGE DLPGLTDTE+PRMRG
Sbjct: 77  LHRGTPCFRGYGRRNGERRRKAVRGCIVSQDLSVLNLVIVKKGESDLPGLTDTEKPRMRG 136

Query: 583 PKRASNIRRLFNLSKEDDVRKYVNTYRRNFTNKAGKKCSKAPKIQRLVTPLTLQRKRSRI 404
           PKRAS IR+LFNLSK+DDVRKYVNTYRR+FT K+GKKCSKAPKIQRLVTPLTLQRKR+RI
Sbjct: 137 PKRASKIRKLFNLSKDDDVRKYVNTYRRSFTTKSGKKCSKAPKIQRLVTPLTLQRKRARI 196

Query: 403 AEKKNRVAKAKSEAADYLKLLATRAKEQKERRSESLAKKRSR 278
           AEKK R+AKAKSEAA+Y KLLATR KEQ+ERRSESLAK+RSR
Sbjct: 197 AEKKKRIAKAKSEAAEYQKLLATRLKEQRERRSESLAKRRSR 238


>sp|Q9M3V8.1|RS6_ASPOF RecName: Full=40S ribosomal protein S6 gi|7649387|emb|CAB89081.1|
           S6 ribosomal protein [Asparagus officinalis]
          Length = 251

 Score =  367 bits (943), Expect = 2e-99
 Identities = 187/222 (84%), Positives = 197/222 (88%)
 Frame = -2

Query: 943 EIDDDQKLRAFYDKRISQEVNGDALGEEFRGYVFKIMGGCDKQGFPMKQGVLTPGRVRLL 764
           EIDDDQKLRAFYDKRISQEV+GDALGEEF+GYVFKIMGGCDKQGFPMKQGVLTPGRVRLL
Sbjct: 17  EIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLL 76

Query: 763 LHRGTPCFXXXXXXXXXXXXXXXXGCIVSQDLSVLNLVIVKKGEDDLPGLTDTERPRMRG 584
           LHRGTPCF                GCIVS DLSVLNLVIVKKGE+DLPGLTD E+PRMRG
Sbjct: 77  LHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDVEKPRMRG 136

Query: 583 PKRASNIRRLFNLSKEDDVRKYVNTYRRNFTNKAGKKCSKAPKIQRLVTPLTLQRKRSRI 404
           PKRAS IR+LFNLSKEDDVRKYVNTYRR FTNK GK CSKAPKIQRLVTPLTLQRKR+RI
Sbjct: 137 PKRASKIRKLFNLSKEDDVRKYVNTYRRTFTNKKGKTCSKAPKIQRLVTPLTLQRKRARI 196

Query: 403 AEKKNRVAKAKSEAADYLKLLATRAKEQKERRSESLAKKRSR 278
           AEKK RVAKAKSEAA+Y KLLA+R KEQ++RRSESLAKKRSR
Sbjct: 197 AEKKKRVAKAKSEAAEYQKLLASRLKEQRDRRSESLAKKRSR 238


>ref|XP_002273865.1| PREDICTED: 40S ribosomal protein S6 isoform 1 [Vitis vinifera]
           gi|297741825|emb|CBI33138.3| unnamed protein product
           [Vitis vinifera]
          Length = 249

 Score =  367 bits (943), Expect = 2e-99
 Identities = 186/222 (83%), Positives = 198/222 (89%)
 Frame = -2

Query: 943 EIDDDQKLRAFYDKRISQEVNGDALGEEFRGYVFKIMGGCDKQGFPMKQGVLTPGRVRLL 764
           EIDDDQKLRAF+DKRISQEV+GDALGEEF+GYVFKIMGGCDKQGFPMKQGVLTPGRV+LL
Sbjct: 17  EIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVQLL 76

Query: 763 LHRGTPCFXXXXXXXXXXXXXXXXGCIVSQDLSVLNLVIVKKGEDDLPGLTDTERPRMRG 584
           LHRGTPCF                GCIVSQDLSVLNLVIVKKGE +LPGLTD E+PRMRG
Sbjct: 77  LHRGTPCFRGYGRRNGERRRKAVRGCIVSQDLSVLNLVIVKKGEGELPGLTDVEKPRMRG 136

Query: 583 PKRASNIRRLFNLSKEDDVRKYVNTYRRNFTNKAGKKCSKAPKIQRLVTPLTLQRKRSRI 404
           PKRAS IR+LFNLSKEDDVRKYVNTYRR FT K+GKKCSKAPKIQRLVTPLTLQRKR+RI
Sbjct: 137 PKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRARI 196

Query: 403 AEKKNRVAKAKSEAADYLKLLATRAKEQKERRSESLAKKRSR 278
           AEKK R+AKAKSEAA+Y KLLATR KEQ+ERRSESLAKKRSR
Sbjct: 197 AEKKKRIAKAKSEAAEYQKLLATRLKEQRERRSESLAKKRSR 238


>gb|ABK24202.1| unknown [Picea sitchensis]
          Length = 253

 Score =  366 bits (940), Expect = 4e-99
 Identities = 185/222 (83%), Positives = 196/222 (88%)
 Frame = -2

Query: 943 EIDDDQKLRAFYDKRISQEVNGDALGEEFRGYVFKIMGGCDKQGFPMKQGVLTPGRVRLL 764
           EIDDDQKLRAFYDKR+SQEVNGDALGEEF+GYVFKIMGGCDKQGFPMKQGVLTPGRVRLL
Sbjct: 17  EIDDDQKLRAFYDKRLSQEVNGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLL 76

Query: 763 LHRGTPCFXXXXXXXXXXXXXXXXGCIVSQDLSVLNLVIVKKGEDDLPGLTDTERPRMRG 584
           LHRGTPCF                GCIVSQDLSVLNLVIVKKGE+DLPGLTDTE+PRMRG
Sbjct: 77  LHRGTPCFRGFGRRKGERRRKSVRGCIVSQDLSVLNLVIVKKGENDLPGLTDTEKPRMRG 136

Query: 583 PKRASNIRRLFNLSKEDDVRKYVNTYRRNFTNKAGKKCSKAPKIQRLVTPLTLQRKRSRI 404
           PKRAS IR+LFNL+K+DDVRKYVNTYRR F  K+GKKCSKAPKIQRLVTPLTLQRKRSRI
Sbjct: 137 PKRASKIRKLFNLTKDDDVRKYVNTYRRTFVTKSGKKCSKAPKIQRLVTPLTLQRKRSRI 196

Query: 403 AEKKNRVAKAKSEAADYLKLLATRAKEQKERRSESLAKKRSR 278
           AEKK RVAKAK EAA+Y KLLATR KEQ++ RSESLAKKR R
Sbjct: 197 AEKKQRVAKAKLEAAEYQKLLATRLKEQRDHRSESLAKKRDR 238