BLASTX nr result

ID: Coptis23_contig00001023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001023
         (1377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36923.3| unnamed protein product [Vitis vinifera]              533   e-149
ref|XP_002275035.1| PREDICTED: phosphoribosylformylglycinamidine...   533   e-149
gb|AAR06290.1| 5'-aminoimidazole ribonucleotide synthetase [Sola...   528   e-147
ref|XP_002278175.2| PREDICTED: LOW QUALITY PROTEIN: phosphoribos...   525   e-147
ref|XP_002876282.1| chloroplast phosphoribosylformylglycinamidin...   516   e-144

>emb|CBI36923.3| unnamed protein product [Vitis vinifera]
          Length = 457

 Score =  533 bits (1372), Expect = e-149
 Identities = 276/374 (73%), Positives = 309/374 (82%), Gaps = 8/374 (2%)
 Frame = -3

Query: 1249 YICKSPK--FQSFFKISSLTPGKLRLKREAASLVMNVKSGDDDGQS------MTYKDAGV 1094
            Y CK  K  F   F +  +  GK+  +R   + +++  S ++ G+S      +TYKDAGV
Sbjct: 83   YPCKGTKNCFSKRFSLLRMAAGKVAARRTRNTSLISSMSKNNYGESADMADSLTYKDAGV 142

Query: 1093 DIDAGSELVKRIAKMAPXXXXXXXXXXXXXXFLVAGTDGVGTKLKLAFETGIHDTIGIDL 914
            DIDAGSELVKRIAKMAP              +LVAGTDGVGTKLKLAFETGIH+TIGIDL
Sbjct: 143  DIDAGSELVKRIAKMAPGIGGFGGLFPLGDSYLVAGTDGVGTKLKLAFETGIHETIGIDL 202

Query: 913  VAMSVNDIVTSGAKPLFFLDYFATSHLDVDLAEKVIKGIVDGCQQCDCALLGGETAEMPD 734
            VAMSVNDIVTSGAKPLFFLDYFATSHLDVDLAEKVIKGIVDGCQQ DC LLGGETAEMPD
Sbjct: 203  VAMSVNDIVTSGAKPLFFLDYFATSHLDVDLAEKVIKGIVDGCQQSDCVLLGGETAEMPD 262

Query: 733  FYADGEYDLSGFAVGSVGKNSVIDGKNIVAGDVLLGLPSSGVHSNGFSLVRRVLARSGLS 554
            FYADGEYDLSGFAVG V K+SVIDGKNIV GDVL+GL SSGVHSNGFSLVRRVL+RSGLS
Sbjct: 263  FYADGEYDLSGFAVGVVKKDSVIDGKNIVPGDVLIGLLSSGVHSNGFSLVRRVLSRSGLS 322

Query: 553  LKNQLPGATITLGEALMAPTIIYVKQVLDIISKGGVKGIAHITGGGLTDNIPRIFPKGLG 374
            LK+QLPG  ITLGEALMAPT+IYVKQVLD ISKGGVKGIAHITGGG TDNIPR+FPKGLG
Sbjct: 323  LKDQLPGEAITLGEALMAPTVIYVKQVLDFISKGGVKGIAHITGGGFTDNIPRVFPKGLG 382

Query: 373  AAIHQDSWNVPALFKWIQEAGRVEDVEMRRTFNLGIGMVLVVTPEAAVRILGECHKRNVA 194
            A I++DSW VP++FKWIQEAG++ED EMRRTFN+GIGMVLVV+PEA++RILG+ +    A
Sbjct: 383  AVIYKDSWEVPSVFKWIQEAGQIEDAEMRRTFNMGIGMVLVVSPEASLRILGDGNGAYTA 442

Query: 193  YRIGEVVSGGGVTY 152
            Y+IGEV  G GV Y
Sbjct: 443  YKIGEVAVGEGVRY 456


>ref|XP_002275035.1| PREDICTED: phosphoribosylformylglycinamidine cyclo-ligase,
            chloroplastic/mitochondrial [Vitis vinifera]
            gi|147859594|emb|CAN83527.1| hypothetical protein
            VITISV_002057 [Vitis vinifera]
          Length = 406

 Score =  533 bits (1372), Expect = e-149
 Identities = 276/374 (73%), Positives = 309/374 (82%), Gaps = 8/374 (2%)
 Frame = -3

Query: 1249 YICKSPK--FQSFFKISSLTPGKLRLKREAASLVMNVKSGDDDGQS------MTYKDAGV 1094
            Y CK  K  F   F +  +  GK+  +R   + +++  S ++ G+S      +TYKDAGV
Sbjct: 32   YPCKGTKNCFSKRFSLLRMAAGKVAARRTRNTSLISSMSKNNYGESADMADSLTYKDAGV 91

Query: 1093 DIDAGSELVKRIAKMAPXXXXXXXXXXXXXXFLVAGTDGVGTKLKLAFETGIHDTIGIDL 914
            DIDAGSELVKRIAKMAP              +LVAGTDGVGTKLKLAFETGIH+TIGIDL
Sbjct: 92   DIDAGSELVKRIAKMAPGIGGFGGLFPLGDSYLVAGTDGVGTKLKLAFETGIHETIGIDL 151

Query: 913  VAMSVNDIVTSGAKPLFFLDYFATSHLDVDLAEKVIKGIVDGCQQCDCALLGGETAEMPD 734
            VAMSVNDIVTSGAKPLFFLDYFATSHLDVDLAEKVIKGIVDGCQQ DC LLGGETAEMPD
Sbjct: 152  VAMSVNDIVTSGAKPLFFLDYFATSHLDVDLAEKVIKGIVDGCQQSDCVLLGGETAEMPD 211

Query: 733  FYADGEYDLSGFAVGSVGKNSVIDGKNIVAGDVLLGLPSSGVHSNGFSLVRRVLARSGLS 554
            FYADGEYDLSGFAVG V K+SVIDGKNIV GDVL+GL SSGVHSNGFSLVRRVL+RSGLS
Sbjct: 212  FYADGEYDLSGFAVGVVKKDSVIDGKNIVPGDVLIGLLSSGVHSNGFSLVRRVLSRSGLS 271

Query: 553  LKNQLPGATITLGEALMAPTIIYVKQVLDIISKGGVKGIAHITGGGLTDNIPRIFPKGLG 374
            LK+QLPG  ITLGEALMAPT+IYVKQVLD ISKGGVKGIAHITGGG TDNIPR+FPKGLG
Sbjct: 272  LKDQLPGEAITLGEALMAPTVIYVKQVLDFISKGGVKGIAHITGGGFTDNIPRVFPKGLG 331

Query: 373  AAIHQDSWNVPALFKWIQEAGRVEDVEMRRTFNLGIGMVLVVTPEAAVRILGECHKRNVA 194
            A I++DSW VP++FKWIQEAG++ED EMRRTFN+GIGMVLVV+PEA++RILG+ +    A
Sbjct: 332  AVIYKDSWEVPSVFKWIQEAGQIEDAEMRRTFNMGIGMVLVVSPEASLRILGDGNGAYTA 391

Query: 193  YRIGEVVSGGGVTY 152
            Y+IGEV  G GV Y
Sbjct: 392  YKIGEVAVGEGVRY 405


>gb|AAR06290.1| 5'-aminoimidazole ribonucleotide synthetase [Solanum tuberosum]
          Length = 404

 Score =  528 bits (1361), Expect = e-147
 Identities = 273/369 (73%), Positives = 302/369 (81%), Gaps = 8/369 (2%)
 Frame = -3

Query: 1234 PKFQSFFK--------ISSLTPGKLRLKREAASLVMNVKSGDDDGQSMTYKDAGVDIDAG 1079
            PK Q F K        I++ +  +  +          V +  D+  S+TYKDAGVDIDAG
Sbjct: 35   PKLQDFSKKLLPLCKDINARSNRERSIPYSVTCSASQVDTAADEPSSLTYKDAGVDIDAG 94

Query: 1078 SELVKRIAKMAPXXXXXXXXXXXXXXFLVAGTDGVGTKLKLAFETGIHDTIGIDLVAMSV 899
            SELVKRIAKMAP              +LVAGTDGVGTKLKLAFETGIHDTIGIDLVAMSV
Sbjct: 95   SELVKRIAKMAPGIGGFGGLFPLGDSYLVAGTDGVGTKLKLAFETGIHDTIGIDLVAMSV 154

Query: 898  NDIVTSGAKPLFFLDYFATSHLDVDLAEKVIKGIVDGCQQCDCALLGGETAEMPDFYADG 719
            NDIVTSGAKPLFFLDYFATS LDVDLAEKVIKGIVDGCQQ DCALLGGETAEMPDFYA+G
Sbjct: 155  NDIVTSGAKPLFFLDYFATSRLDVDLAEKVIKGIVDGCQQSDCALLGGETAEMPDFYAEG 214

Query: 718  EYDLSGFAVGSVGKNSVIDGKNIVAGDVLLGLPSSGVHSNGFSLVRRVLARSGLSLKNQL 539
            EYDLSGFAVG V K+SVIDGKNI  GDVL+GLPSSGVHSNGFSLVRRVL +SGLSLK+QL
Sbjct: 215  EYDLSGFAVGIVKKDSVIDGKNIKVGDVLIGLPSSGVHSNGFSLVRRVLKQSGLSLKDQL 274

Query: 538  PGATITLGEALMAPTIIYVKQVLDIISKGGVKGIAHITGGGLTDNIPRIFPKGLGAAIHQ 359
            PG +ITLGEAL+APT+IYVKQVLDIISKGGVKGIAHITGGG TDNIPR+FPKGLGA I++
Sbjct: 275  PGESITLGEALIAPTVIYVKQVLDIISKGGVKGIAHITGGGFTDNIPRVFPKGLGALIYE 334

Query: 358  DSWNVPALFKWIQEAGRVEDVEMRRTFNLGIGMVLVVTPEAAVRILGECHKRNVAYRIGE 179
             SW +P +FKWIQEAGR+ED EM RTFN+G+GMVLVV+PEAA RIL E  K ++AYRIGE
Sbjct: 335  GSWTIPPVFKWIQEAGRIEDAEMMRTFNMGVGMVLVVSPEAADRILMEVQKTSIAYRIGE 394

Query: 178  VVSGGGVTY 152
            VV G GV+Y
Sbjct: 395  VVKGDGVSY 403


>ref|XP_002278175.2| PREDICTED: LOW QUALITY PROTEIN: phosphoribosylformylglycinamidine
            cyclo-ligase, chloroplastic/mitochondrial-like [Vitis
            vinifera]
          Length = 407

 Score =  525 bits (1353), Expect = e-147
 Identities = 275/373 (73%), Positives = 307/373 (82%), Gaps = 9/373 (2%)
 Frame = -3

Query: 1243 CKSPK--FQSFFKISSLTPGKLRLKREAASLVMNVKSGDDDGQS------MTYKDAGVDI 1088
            CK  +  F   F +  +  G++R +R   + +++  S ++ G+S      +TYKDAGVDI
Sbjct: 34   CKGTENCFSKRFSLLRMAAGEVRPRRPRNTSLISSMSKNNYGESADMADSLTYKDAGVDI 93

Query: 1087 DAGSELVKRIAKMAPXXXXXXXXXXXXXXFLVAGTDGVGTKLKLAFETGIHDTIGIDLVA 908
            DAGSELVKRIAKMAP              +LVAGTDGVGTKLKLAFETGIH+TIGIDLVA
Sbjct: 94   DAGSELVKRIAKMAPGIGGFGGLFPLGDSYLVAGTDGVGTKLKLAFETGIHETIGIDLVA 153

Query: 907  MSVNDIVTSGAKPLFFLDYFATSHLDVDLAEKVIKGIVDGCQQCDCALLGGETAEMPDFY 728
            MSVNDIVTSGAKPLFFLDYFATSHLDVDLAEKVIKGIVDGCQQ DC LLGGETAEMPDFY
Sbjct: 154  MSVNDIVTSGAKPLFFLDYFATSHLDVDLAEKVIKGIVDGCQQSDCVLLGGETAEMPDFY 213

Query: 727  ADGEYDLSGFAVGSVGKNSVIDGKNIVAGDVLLGLPSSGVHSNGFSLVRRVLARSGLSLK 548
            ADGEYDLSGFAVG V K+SVIDGK IV GDVL+GLPSSGVHSNGFSLVRRVL++SGLSLK
Sbjct: 214  ADGEYDLSGFAVGVVKKDSVIDGKTIVPGDVLIGLPSSGVHSNGFSLVRRVLSKSGLSLK 273

Query: 547  NQLPGATITLGEALMAPTIIYVKQVLDIISK-GGVKGIAHITGGGLTDNIPRIFPKGLGA 371
             QLPG  ITLGEALMAPTIIYVKQVLD ISK GGVKGIAHITGGG TDNIPR+FPKGLGA
Sbjct: 274  GQLPGEAITLGEALMAPTIIYVKQVLDFISKEGGVKGIAHITGGGFTDNIPRVFPKGLGA 333

Query: 370  AIHQDSWNVPALFKWIQEAGRVEDVEMRRTFNLGIGMVLVVTPEAAVRILGECHKRNVAY 191
             I++DSW VP++FKWIQEAGR+ED EMRRTFN+GIGMVLVV+PEA+ RILG+ +    AY
Sbjct: 334  VIYKDSWEVPSVFKWIQEAGRIEDAEMRRTFNMGIGMVLVVSPEASSRILGDGNGAYTAY 393

Query: 190  RIGEVVSGGGVTY 152
            +IGEV S  GV Y
Sbjct: 394  KIGEVASDEGVRY 406


>ref|XP_002876282.1| chloroplast phosphoribosylformylglycinamidine cyclo-ligase
            [Arabidopsis lyrata subsp. lyrata]
            gi|297322120|gb|EFH52541.1| chloroplast
            phosphoribosylformylglycinamidine cyclo-ligase
            [Arabidopsis lyrata subsp. lyrata]
          Length = 388

 Score =  516 bits (1330), Expect = e-144
 Identities = 265/362 (73%), Positives = 301/362 (83%), Gaps = 6/362 (1%)
 Frame = -3

Query: 1219 FFKISSLTPGKLRLKREA-----ASLVMNVKSGDDDGQSMTYKDAGVDIDAGSELVKRIA 1055
            F  +SSL P  +   + A      + V+++   DD   S+TYKD+GVDIDAG+ELVKRIA
Sbjct: 26   FSSVSSLKPVSVSFTQTARIRTKVARVLSMSKKDDATDSLTYKDSGVDIDAGTELVKRIA 85

Query: 1054 KMAPXXXXXXXXXXXXXXFLVAGTDGVGTKLKLAFETGIHDTIGIDLVAMSVNDIVTSGA 875
            KMAP              +LVAGTDGVGTKLKLAFETGIHDTIGIDLVAMSVNDI+TSGA
Sbjct: 86   KMAPGIGGFGGLFPLGDDYLVAGTDGVGTKLKLAFETGIHDTIGIDLVAMSVNDIITSGA 145

Query: 874  KPLFFLDYFATSHLDVDLAEKVIKGIVDGCQQCDCALLGGETAEMPDFYADGEYDLSGFA 695
            KPLFFLDYFATS LDVDLAEKVIKGIV+GC+Q +CALLGGETAEMP FYA+GEYDLSGFA
Sbjct: 146  KPLFFLDYFATSRLDVDLAEKVIKGIVEGCRQSECALLGGETAEMPGFYAEGEYDLSGFA 205

Query: 694  VGSVGKNSVIDGKNIVAGDVLLGLPSSGVHSNGFSLVRRVLARSGLSLKNQLPGATITLG 515
            VG V KN+VI+GKNIVAGDVL+GLPSSGVHSNGFSLVRRVLARS LSL + LPG   TLG
Sbjct: 206  VGIVKKNAVINGKNIVAGDVLIGLPSSGVHSNGFSLVRRVLARSNLSLNDALPGGLTTLG 265

Query: 514  EALMAPTIIYVKQVLDIISKGGVKGIAHITGGGLTDNIPRIFPKGLGAAIHQDSWNVPAL 335
            EALMAPT+IYVKQVLDIIS+GGVKGIAHITGGG TDNIPR+FP GLGA IH D+W +P L
Sbjct: 266  EALMAPTVIYVKQVLDIISRGGVKGIAHITGGGFTDNIPRVFPDGLGAVIHTDAWELPPL 325

Query: 334  FKWIQEAGRVEDVEMRRTFNLGIGMVLVVTPEAAVRILGECHKRN-VAYRIGEVVSGGGV 158
            FKWIQ++GR+ED+EMRRTFNLGIGMV+VV+PEAA RIL E    + VAYR+GEV++G GV
Sbjct: 326  FKWIQQSGRIEDMEMRRTFNLGIGMVMVVSPEAASRILQEAKNGDYVAYRVGEVINGEGV 385

Query: 157  TY 152
            +Y
Sbjct: 386  SY 387


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