BLASTX nr result

ID: Coptis23_contig00000997 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000997
         (1446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266803.1| PREDICTED: transcription factor VIP1-like [V...   351   3e-94
gb|ABK96202.1| unknown [Populus trichocarpa]                          319   1e-84
dbj|BAA97100.1| bZIP transcriptional activator RSG [Nicotiana ta...   305   2e-80
gb|ADO23656.1| repression of shoot growth [Solanum tuberosum]         297   5e-78
ref|XP_002307491.1| predicted protein [Populus trichocarpa] gi|2...   287   4e-75

>ref|XP_002266803.1| PREDICTED: transcription factor VIP1-like [Vitis vinifera]
          Length = 350

 Score =  351 bits (900), Expect = 3e-94
 Identities = 199/335 (59%), Positives = 230/335 (68%), Gaps = 11/335 (3%)
 Frame = +2

Query: 167  NIIDIDGMPDTPKRGSHHRRAQSETFFRFPDDIIFDTDVDFNLS-SMDIIPSMSEENV-- 337
            N  DID MPD P RG+HHRRAQSETFFRF DDI+ D D D ++  ++DII   +      
Sbjct: 17   NRADIDHMPDAPYRGAHHRRAQSETFFRFSDDILLDADADVDVDFNLDIISDNTNSGAAG 76

Query: 338  IMTNVDDXXXXXXXXXXXXXXXXXXXXXINHFRSLSVGSDFFDEMGFQPSXXXXXXXXXX 517
            +   VD                      INHFRSLSV +DFF+ +GF P+          
Sbjct: 77   VPMAVDSSKSEDSNGGYSASAKAKSLDPINHFRSLSVDADFFEGLGFSPAATAAAGESSD 136

Query: 518  XXXX-----RKMLHRHSFSMDGGLSSSFEADSL---DSAKKAMAPERLAELALIDPKRAK 673
                     R   HRHS SMDG  ++SFE +SL   D AKKAM P+RLAELALIDPKRAK
Sbjct: 137  GGGKATQEKRVHHHRHSNSMDGS-TTSFEVESLIGSDGAKKAMGPDRLAELALIDPKRAK 195

Query: 674  RILANRQSAARSKERKIRYTSELERKVQTLQTEATTLSAQVTMLQRDTTGLTSENKELKL 853
            RILANRQSAARSKERKIRYT+ELERKVQTLQTEATTLSAQVTMLQRDTTGLT+ENKELKL
Sbjct: 196  RILANRQSAARSKERKIRYTNELERKVQTLQTEATTLSAQVTMLQRDTTGLTAENKELKL 255

Query: 854  RLQSMEQQAHLRDALNEALRDEVQRLKIATGEAPPINGSIYNRARPPTYFSQPRPFGHFN 1033
            RLQ+MEQQA LR+ALNEALR+EVQRLKIATG+ P +NG+ +NR  PP + S P+   HF 
Sbjct: 256  RLQAMEQQASLREALNEALREEVQRLKIATGQIPAVNGNSFNRGLPPQFSSHPQALHHFG 315

Query: 1034 ISQNHQQQLNMPPSSANGQPVGGQSQHGTMDFNQR 1138
             +Q  QQQL+MP SS N Q + GQ Q   +DFNQR
Sbjct: 316  -AQQQQQQLHMPQSSTNNQSLNGQPQPSFLDFNQR 349


>gb|ABK96202.1| unknown [Populus trichocarpa]
          Length = 340

 Score =  319 bits (818), Expect = 1e-84
 Identities = 188/335 (56%), Positives = 219/335 (65%), Gaps = 13/335 (3%)
 Frame = +2

Query: 173  IDIDGMPDTPKRGSHHRRAQSETFFRFPDDIIFDTDVDFNLSSMDIIPSMSEENVIMTNV 352
            +DI+ MP+TP RGSHHRRA S+T FRF DD++F    DF+LSS+D +P+ +      T  
Sbjct: 14   VDIEQMPETPYRGSHHRRAHSDTSFRF-DDLLFLDASDFDLSSLDDLPTPNTTTTTTTTT 72

Query: 353  DDXXXXXXXXXXXXXXXXXXXXX-----INHFRSLSVGSDFFDEMGFQPSXXXXXXXXXX 517
                                        +NH RSLS+ SDFFD +G   +          
Sbjct: 73   HPPPAAPMAVDSLSDDSTSNGQNQKPKPVNHLRSLSMDSDFFDGLGLGAAGGADEKFDGK 132

Query: 518  XXXXRKML----HRHSFSMDGGLSSSFEADSL--DSAKKAMAPERLAELALIDPKRAKRI 679
                 K      HRHS+SMDG    SFE DS+  D  KKAMAP+RLAEL+LIDPKRAKRI
Sbjct: 133  AVAGEKRAANPHHRHSYSMDG----SFEVDSIMIDGVKKAMAPDRLAELSLIDPKRAKRI 188

Query: 680  LANRQSAARSKERKIRYTSELERKVQTLQTEATTLSAQVTMLQRDTTGLTSENKELKLRL 859
            LANRQSAARSKERKIRYT ELERKVQTLQTEATTLSAQVTMLQRDTTGLT ENKELKLRL
Sbjct: 189  LANRQSAARSKERKIRYTGELERKVQTLQTEATTLSAQVTMLQRDTTGLTVENKELKLRL 248

Query: 860  QSMEQQAHLRDALNEALRDEVQRLKIATGEAPPINGSIYNRARPPTYFSQP--RPFGHFN 1033
            Q+MEQQAHLRDALNEALR+EVQRLKIATG+ P +NG+ +NR  PP + S    + FG   
Sbjct: 249  QAMEQQAHLRDALNEALREEVQRLKIATGQVPAVNGNPFNRGLPPQFSSHQGLQTFG--- 305

Query: 1034 ISQNHQQQLNMPPSSANGQPVGGQSQHGTMDFNQR 1138
             +Q  QQQL+MP  S  GQ   GQ      +F+QR
Sbjct: 306  -NQQAQQQLHMPQPSTTGQTHNGQPHPSFSNFSQR 339


>dbj|BAA97100.1| bZIP transcriptional activator RSG [Nicotiana tabacum]
          Length = 350

 Score =  305 bits (781), Expect = 2e-80
 Identities = 185/334 (55%), Positives = 219/334 (65%), Gaps = 13/334 (3%)
 Frame = +2

Query: 176  DIDGMPDTPKRGSHHRRAQSETFFRFPD---DIIFDTDV-DFNL--SSMDIIPSMSEENV 337
            D+D MPDTP R + HRRAQSETFFRFPD   DI+ D  V DFNL  S+  + PS ++ ++
Sbjct: 20   DLDQMPDTPTRIARHRRAQSETFFRFPDFDDDILLDDVVADFNLDISAPSLSPS-ADTHM 78

Query: 338  IMTNVDDXXXXXXXXXXXXXXXXXXXXXINHFRSLSVGSDFFDEMGFQPSXXXXXXXXXX 517
               N  D                     +NHFRSLSV +DFFD + F  +          
Sbjct: 79   QPANSADSSSTGGPGLMSGPGANNNPRPLNHFRSLSVDADFFDGLEFGATTPGAAAEEEK 138

Query: 518  XXXXRKML------HRHSFSMDGGLSS-SFEADSLDSAKKAMAPERLAELALIDPKRAKR 676
                   +      HRHS SMDG  S+ SFEA+   S KKAMAP+RLAELALIDPKRAKR
Sbjct: 139  KVFGSSSVSGSGTRHRHSNSMDGSFSTASFEAECSSSVKKAMAPDRLAELALIDPKRAKR 198

Query: 677  ILANRQSAARSKERKIRYTSELERKVQTLQTEATTLSAQVTMLQRDTTGLTSENKELKLR 856
            ILANRQSAARSKERKIRYTSELERKVQTLQTEATTLSAQ+T+LQRD +GLT+ENKELKLR
Sbjct: 199  ILANRQSAARSKERKIRYTSELERKVQTLQTEATTLSAQITVLQRDNSGLTNENKELKLR 258

Query: 857  LQSMEQQAHLRDALNEALRDEVQRLKIATGEAPPINGSIYNRARPPTYFSQPRPFGHFNI 1036
            LQ++EQ AHLRDALNEALR+E+QRLKIA G+    NG   NR   P +  QP+ F     
Sbjct: 259  LQALEQGAHLRDALNEALREELQRLKIAAGQILGANG---NRGPRPHFPPQPQSFVQCGS 315

Query: 1037 SQNHQQQLNMPPSSANGQPVGGQSQHGTMDFNQR 1138
                QQQ +MP S+ + Q +GGQ+Q   M+FN R
Sbjct: 316  HHAQQQQQHMPHSTTSTQNIGGQTQPSFMNFNNR 349


>gb|ADO23656.1| repression of shoot growth [Solanum tuberosum]
          Length = 337

 Score =  297 bits (760), Expect = 5e-78
 Identities = 191/362 (52%), Positives = 228/362 (62%), Gaps = 16/362 (4%)
 Frame = +2

Query: 95   MEPQFTETLTGKQQYSSSPVVRNSNIIDIDGMPDTPKRGSHHRRAQSETFFRFPD---DI 265
            M+P+FT    GK      P+      ID+D MPDTP R + HRRAQSETFFRFPD   DI
Sbjct: 1    MDPKFT----GKP----IPIPFLPGRIDLDQMPDTPTRIARHRRAQSETFFRFPDFDDDI 52

Query: 266  IFDTDV-DFNL--SSMDIIPSMSEENVIMTNVDDXXXXXXXXXXXXXXXXXXXXXINHFR 436
            + D  V DFNL  S+  + PS         + D                      +NHFR
Sbjct: 53   LLDDVVADFNLDISAPALSPSTDTHMQPANSADSSSNGPGADHNPRP--------LNHFR 104

Query: 437  SLSVGSDFFDEMGFQPSXXXXXXXXXXXXXXRKML---------HRHSFSMDGGLSS-SF 586
            SLSV +DFFD + F  +              +KM+         HRHS SMDG  S+ SF
Sbjct: 105  SLSVDADFFDGLEFGEAGATTPAASEE----KKMMGLGSGSSSRHRHSNSMDGSFSAASF 160

Query: 587  EADSLDSAKKAMAPERLAELALIDPKRAKRILANRQSAARSKERKIRYTSELERKVQTLQ 766
            EA+S  S KKAMAP+RLAELALIDPKRAKRILANRQSAARSKERKIRYTSELERKVQTLQ
Sbjct: 161  EAES--SVKKAMAPDRLAELALIDPKRAKRILANRQSAARSKERKIRYTSELERKVQTLQ 218

Query: 767  TEATTLSAQVTMLQRDTTGLTSENKELKLRLQSMEQQAHLRDALNEALRDEVQRLKIATG 946
            +EATTLSAQ+T+LQRD +GLT+ENKELKLRLQ++EQ+AHLRDALNEALR+E+Q LKI  G
Sbjct: 219  SEATTLSAQITVLQRDNSGLTTENKELKLRLQALEQEAHLRDALNEALREELQHLKITAG 278

Query: 947  EAPPINGSIYNRARPPTYFSQPRPFGHFNISQNHQQQLNMPPSSANGQPVGGQSQHGTMD 1126
            +    NGS   R   P +  QP+ F         QQQ +MP S+ + Q +GGQ+Q   M+
Sbjct: 279  QMSAANGS---RGARPHFPPQPQSFVQCGNHHTQQQQPHMPQSTTSTQNIGGQTQPSFMN 335

Query: 1127 FN 1132
            FN
Sbjct: 336  FN 337


>ref|XP_002307491.1| predicted protein [Populus trichocarpa] gi|222856940|gb|EEE94487.1|
            predicted protein [Populus trichocarpa]
          Length = 330

 Score =  287 bits (735), Expect = 4e-75
 Identities = 173/321 (53%), Positives = 207/321 (64%), Gaps = 12/321 (3%)
 Frame = +2

Query: 170  IIDIDGMPDTPKRGSHHRRAQSETFFRFPDDIIFDTDVDFNLSSMDIIPSMSEEN----- 334
            I+DI+ MP+TP RG+HHRRA S+T FRF D +IFD   DF+L  +D +P+ +        
Sbjct: 2    IVDIEQMPETPHRGNHHRRAHSDTSFRFDDLLIFDAS-DFDLPPLDDLPTPNTTTHPPPA 60

Query: 335  --VIMTNVDDXXXXXXXXXXXXXXXXXXXXXINHFRSLSVGSDFFDEMGFQPSXXXXXXX 508
              V + ++ D                     +NH RSLS+ S+FFD +    +       
Sbjct: 61   APVAVDSLSDDSTSNGQNQKPKP--------VNHLRSLSMDSEFFDGLSLGAAGGGDEKL 112

Query: 509  XXXXXXXRKML---HRHSFSMDGGLSSSFEADSL--DSAKKAMAPERLAELALIDPKRAK 673
                    K     HRHS+SMDG    SFEA+SL  D  KKAMAP+RLAEL+LIDPKRAK
Sbjct: 113  GGKAVAGEKRAADHHRHSYSMDG----SFEAESLMIDGVKKAMAPDRLAELSLIDPKRAK 168

Query: 674  RILANRQSAARSKERKIRYTSELERKVQTLQTEATTLSAQVTMLQRDTTGLTSENKELKL 853
            RILANRQSAARSKERKI+YTSELERKVQTLQTEATTLSAQVTMLQRDT GLT ENKELKL
Sbjct: 169  RILANRQSAARSKERKIKYTSELERKVQTLQTEATTLSAQVTMLQRDTNGLTVENKELKL 228

Query: 854  RLQSMEQQAHLRDALNEALRDEVQRLKIATGEAPPINGSIYNRARPPTYFSQPRPFGHFN 1033
            RLQ+MEQQAHLRDALNEALR+EVQRLKIATG+   +NG+ +NR   P +           
Sbjct: 229  RLQAMEQQAHLRDALNEALREEVQRLKIATGQITAVNGNPFNRGLAPQF----------- 277

Query: 1034 ISQNHQQQLNMPPSSANGQPV 1096
               +HQ  L  P +SA   P+
Sbjct: 278  --PSHQITLWQPANSAAHPPL 296


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