BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000988
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326302.1| predicted protein [Populus trichocarpa] gi|2...   178   5e-43
ref|XP_002516227.1| conserved hypothetical protein [Ricinus comm...   177   1e-42
emb|CBI29601.3| unnamed protein product [Vitis vinifera]              167   1e-39
ref|XP_002267256.2| PREDICTED: RRP12-like protein-like [Vitis vi...   166   3e-39
ref|XP_003541316.1| PREDICTED: RRP12-like protein-like [Glycine ...   155   3e-36

>ref|XP_002326302.1| predicted protein [Populus trichocarpa] gi|222833495|gb|EEE71972.1|
            predicted protein [Populus trichocarpa]
          Length = 1029

 Score =  178 bits (452), Expect = 5e-43
 Identities = 96/145 (66%), Positives = 104/145 (71%)
 Frame = -1

Query: 437  RQKIRSTLYSDKNRKRKQEASDDDEFEIDSEGRMIIREGGKPKREKAKVDPXXXXXXXXX 258
            R K RS L S  + KRKQE+ DD E  IDSEGR+I+REGGKPK+EK              
Sbjct: 872  RYKTRSALRSTAHLKRKQESDDDPE--IDSEGRLIVREGGKPKKEKLSNPDSDARSEAGS 929

Query: 257  XXXXXXXXXXXRQKTSASGWAYTGNEYASKKAHGDVTRKDKLEPYAYWPLDRKMMSRRPE 78
                       R+KTS SGWAYTG+EYASKKA GDV RKDKLEPYAYWPLDRKMMSRRPE
Sbjct: 930  FKSLNSKKTQKRRKTSNSGWAYTGSEYASKKAGGDVKRKDKLEPYAYWPLDRKMMSRRPE 989

Query: 77   HRAAARKGMASVVKMTKSLQGKSVS 3
            HRAAARKGMASVVKMTK L+GKS S
Sbjct: 990  HRAAARKGMASVVKMTKKLEGKSAS 1014


>ref|XP_002516227.1| conserved hypothetical protein [Ricinus communis]
            gi|223544713|gb|EEF46229.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1233

 Score =  177 bits (449), Expect = 1e-42
 Identities = 105/188 (55%), Positives = 124/188 (65%), Gaps = 1/188 (0%)
 Frame = -1

Query: 563  SSRFNSKALTLRSKQTRRTSAAKSXXXXXXXXXXXXXXXXXDRQKIRSTLYSDKNRKRKQ 384
            SS+  SKA +LRSK+ R++  +                   D++K RS L + ++ KRKQ
Sbjct: 1030 SSQLKSKA-SLRSKRIRKSDKS---LPEDLDQIEDEPLDLLDQRKTRSALRASEHLKRKQ 1085

Query: 383  EASDDDEFEIDSEGRMIIREGGKPKREK-AKVDPXXXXXXXXXXXXXXXXXXXXRQKTSA 207
            E+  DDE EIDSEGR++IRE GK K+EK +  D                     RQKTS 
Sbjct: 1086 ES--DDEMEIDSEGRLVIREAGKLKKEKPSNPDSDGRSEVGSYNTVSSSRKAQKRQKTSG 1143

Query: 206  SGWAYTGNEYASKKAHGDVTRKDKLEPYAYWPLDRKMMSRRPEHRAAARKGMASVVKMTK 27
            SGWAYTGNEYASKKA GD+ +KDKLEPYAYWPLDRKMMSRRPEHRAAARKGMASVVKMTK
Sbjct: 1144 SGWAYTGNEYASKKAGGDLKKKDKLEPYAYWPLDRKMMSRRPEHRAAARKGMASVVKMTK 1203

Query: 26   SLQGKSVS 3
             L+GKS S
Sbjct: 1204 KLEGKSAS 1211


>emb|CBI29601.3| unnamed protein product [Vitis vinifera]
          Length = 1230

 Score =  167 bits (422), Expect = 1e-39
 Identities = 101/185 (54%), Positives = 113/185 (61%), Gaps = 1/185 (0%)
 Frame = -1

Query: 554  FNSKALTLRSKQTRRTSAAKSXXXXXXXXXXXXXXXXXDRQKIRSTLYSDKNRKRKQEAS 375
            +NSKA       +R   AAK                  D+ K RS L S  + KRK    
Sbjct: 1030 YNSKA-----SSSRMHKAAKRLPEDLFDQLEDEPLDLLDQHKTRSALRSTGHLKRKPGL- 1083

Query: 374  DDDEFEIDSEGRMIIREGGKPKREK-AKVDPXXXXXXXXXXXXXXXXXXXXRQKTSASGW 198
             +DE E+DSEGR+IIREGGKP+RE  +  D                     R+KTS SGW
Sbjct: 1084 -EDEPEVDSEGRLIIREGGKPRREMPSNPDSDVRSQASSHMSMNSARDNRKRRKTSDSGW 1142

Query: 197  AYTGNEYASKKAHGDVTRKDKLEPYAYWPLDRKMMSRRPEHRAAARKGMASVVKMTKSLQ 18
            AYTG EYASKKA GDV RKDKLEPYAYWPLDRKMMSRRPEHRAAARKGMASVVK+TK L+
Sbjct: 1143 AYTGGEYASKKAAGDVKRKDKLEPYAYWPLDRKMMSRRPEHRAAARKGMASVVKLTKKLE 1202

Query: 17   GKSVS 3
            GKS S
Sbjct: 1203 GKSAS 1207


>ref|XP_002267256.2| PREDICTED: RRP12-like protein-like [Vitis vinifera]
          Length = 1439

 Score =  166 bits (419), Expect = 3e-39
 Identities = 92/146 (63%), Positives = 102/146 (69%), Gaps = 1/146 (0%)
 Frame = -1

Query: 437  RQKIRSTLYSDKNRKRKQEASDDDEFEIDSEGRMIIREGGKPKREK-AKVDPXXXXXXXX 261
            + K RS L S  + KRK     +DE E+DSEGR+IIREGGKP+RE  +  D         
Sbjct: 1273 QHKTRSALRSTGHLKRKPGL--EDEPEVDSEGRLIIREGGKPRREMPSNPDSDVRSQASS 1330

Query: 260  XXXXXXXXXXXXRQKTSASGWAYTGNEYASKKAHGDVTRKDKLEPYAYWPLDRKMMSRRP 81
                        R+KTS SGWAYTG EYASKKA GDV RKDKLEPYAYWPLDRKMMSRRP
Sbjct: 1331 HMSMNSARDNRKRRKTSDSGWAYTGGEYASKKAAGDVKRKDKLEPYAYWPLDRKMMSRRP 1390

Query: 80   EHRAAARKGMASVVKMTKSLQGKSVS 3
            EHRAAARKGMASVVK+TK L+GKS S
Sbjct: 1391 EHRAAARKGMASVVKLTKKLEGKSAS 1416


>ref|XP_003541316.1| PREDICTED: RRP12-like protein-like [Glycine max]
          Length = 1274

 Score =  155 bits (393), Expect = 3e-36
 Identities = 88/146 (60%), Positives = 99/146 (67%), Gaps = 1/146 (0%)
 Frame = -1

Query: 437  RQKIRSTLYSDKNRKRKQEASDDDEFEIDSEGRMIIREGGKPKREK-AKVDPXXXXXXXX 261
            RQK RS L   ++ KRK     DDE E+DSEGR+II E  + ++EK A  D         
Sbjct: 1104 RQKTRSALKMSEHLKRKSRL--DDEVELDSEGRLIIHEEVEWRKEKHADEDFDSRSERDS 1161

Query: 260  XXXXXXXXXXXXRQKTSASGWAYTGNEYASKKAHGDVTRKDKLEPYAYWPLDRKMMSRRP 81
                        ++KTS SGWAYTG EYASKKA GDV RKDKLEPYAYWPLDRKMMSRRP
Sbjct: 1162 HISAKSGTKAQKKRKTSDSGWAYTGKEYASKKAGGDVKRKDKLEPYAYWPLDRKMMSRRP 1221

Query: 80   EHRAAARKGMASVVKMTKSLQGKSVS 3
            + RAAARKGMASVVKMTK L+GKS S
Sbjct: 1222 QQRAAARKGMASVVKMTKKLEGKSAS 1247