BLASTX nr result

ID: Coptis23_contig00000984 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000984
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514908.1| lipid binding protein, putative [Ricinus com...    98   8e-19
ref|XP_002303794.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_002277578.1| PREDICTED: uncharacterized GPI-anchored prot...    97   2e-18
emb|CAN67019.1| hypothetical protein VITISV_027707 [Vitis vinifera]    96   4e-18
ref|XP_002890752.1| hypothetical protein ARALYDRAFT_890328 [Arab...    95   7e-18

>ref|XP_002514908.1| lipid binding protein, putative [Ricinus communis]
           gi|223545959|gb|EEF47462.1| lipid binding protein,
           putative [Ricinus communis]
          Length = 184

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 43/74 (58%), Positives = 57/74 (77%)
 Frame = -2

Query: 223 KANSPTKECCTTVKDIKDKNPVCLCFIIH*AHDGASSFK*MGLQEAKLLQLPTACNLVNA 44
           K ++P K CC+ VKD+KD +P CLCFI+   H+G++  K +G+QEAKLLQLP+AC L NA
Sbjct: 48  KIDTPPKGCCSAVKDMKDSDPKCLCFIMQQTHNGSAEIKSLGIQEAKLLQLPSACQLQNA 107

Query: 43  NISDCPKLLNLAPN 2
           +IS CPKLL + PN
Sbjct: 108 SISFCPKLLGIPPN 121


>ref|XP_002303794.1| predicted protein [Populus trichocarpa] gi|222841226|gb|EEE78773.1|
           predicted protein [Populus trichocarpa]
          Length = 191

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 42/74 (56%), Positives = 60/74 (81%)
 Frame = -2

Query: 223 KANSPTKECCTTVKDIKDKNPVCLCFIIH*AHDGASSFK*MGLQEAKLLQLPTACNLVNA 44
           KAN+PTK+CC +V++IK+ +P CLCFI+    +G++  K +G+QEAKLLQLPTAC L NA
Sbjct: 51  KANTPTKDCCLSVQNIKESDPKCLCFIMQQTSNGSAPIKNLGIQEAKLLQLPTACQLQNA 110

Query: 43  NISDCPKLLNLAPN 2
           ++S CPKLL ++P+
Sbjct: 111 SLSFCPKLLGISPS 124


>ref|XP_002277578.1| PREDICTED: uncharacterized GPI-anchored protein At1g27950 [Vitis
           vinifera]
          Length = 201

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 40/72 (55%), Positives = 57/72 (79%)
 Frame = -2

Query: 223 KANSPTKECCTTVKDIKDKNPVCLCFIIH*AHDGASSFK*MGLQEAKLLQLPTACNLVNA 44
           KA +PTK+CC+ V +I++  PVCLC+ I   H+G++  K +G+QEAKLLQLP+ C L NA
Sbjct: 56  KAATPTKDCCSAVSEIRESKPVCLCYFIQQTHNGSAEVKSLGIQEAKLLQLPSDCKLANA 115

Query: 43  NISDCPKLLNLA 8
           ++SDCPKLLN++
Sbjct: 116 SLSDCPKLLNIS 127


>emb|CAN67019.1| hypothetical protein VITISV_027707 [Vitis vinifera]
          Length = 201

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 40/72 (55%), Positives = 55/72 (76%)
 Frame = -2

Query: 223 KANSPTKECCTTVKDIKDKNPVCLCFIIH*AHDGASSFK*MGLQEAKLLQLPTACNLVNA 44
           KA +PTK+CC+ V +I+   PVCLC+ I   H+G+   K +G+QEAKLLQLP+ C L NA
Sbjct: 56  KAATPTKDCCSAVSEIRQSKPVCLCYFIQQTHNGSEQVKSLGIQEAKLLQLPSDCKLANA 115

Query: 43  NISDCPKLLNLA 8
           ++SDCPKLLN++
Sbjct: 116 SLSDCPKLLNIS 127


>ref|XP_002890752.1| hypothetical protein ARALYDRAFT_890328 [Arabidopsis lyrata subsp.
           lyrata] gi|297336594|gb|EFH67011.1| hypothetical protein
           ARALYDRAFT_890328 [Arabidopsis lyrata subsp. lyrata]
          Length = 197

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 41/74 (55%), Positives = 58/74 (78%)
 Frame = -2

Query: 223 KANSPTKECCTTVKDIKDKNPVCLCFIIH*AHDGASSFK*MGLQEAKLLQLPTACNLVNA 44
           KA +P+K+CC  V+DIK+++P CLCF+I  A  G  + K +G+QE KL+QLPTAC L NA
Sbjct: 54  KATTPSKKCCDAVEDIKERDPKCLCFVIQQAKTGGQALKDLGVQEDKLIQLPTACQLHNA 113

Query: 43  NISDCPKLLNLAPN 2
           +I++CPKLL L+P+
Sbjct: 114 SITNCPKLLGLSPS 127


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