BLASTX nr result

ID: Coptis23_contig00000897 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000897
         (4722 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278761.1| PREDICTED: uncharacterized protein LOC100259...   299   6e-78
emb|CAN67283.1| hypothetical protein VITISV_021595 [Vitis vinifera]   285   6e-74
ref|XP_003544521.1| PREDICTED: uncharacterized protein LOC100813...   235   8e-59
ref|XP_002516462.1| hypothetical protein RCOM_0798120 [Ricinus c...   231   1e-57
ref|XP_002308576.1| predicted protein [Populus trichocarpa] gi|2...   231   2e-57

>ref|XP_002278761.1| PREDICTED: uncharacterized protein LOC100259454 [Vitis vinifera]
          Length = 690

 Score =  299 bits (765), Expect = 6e-78
 Identities = 179/425 (42%), Positives = 210/425 (49%), Gaps = 12/425 (2%)
 Frame = -1

Query: 1344 QNRVRNPSMGGGYSQQGFRXXXXXXXXXXXXXXXXG---YGYMQPGAYPGAPPQYSMSQP 1174
            +NR+RNP+M GGY QQG++                    Y Y QPG+YPG  PQY+MSQP
Sbjct: 301  ENRIRNPAMAGGYPQQGYQARPPSGWGAPPGAPPMQQPGYSYAQPGSYPGPSPQYNMSQP 360

Query: 1173 PYTGYPPQATSTGWDXXXXXXXXXXXXXGGYDYYNQQP---QQPSTGGASAPADNTGYNY 1003
             Y GY  Q  +TGWD              GYDYY QQ    QQ + GG S PADN+GYNY
Sbjct: 361  AYAGYS-QPNATGWDQTAAPPSQQTTPGSGYDYYGQQQTQQQQQAHGGPSGPADNSGYNY 419

Query: 1002 NQAPASNXXXXXXXXXXXXXXXXXXXXXXXYTQDGYGSGYHAPAPQAGYGQPQANPQSGY 823
            NQ PAS                          QDGYG GYHAPAPQ GYGQPQ  P  GY
Sbjct: 420  NQPPASGYNQQGQGYP----------------QDGYGGGYHAPAPQPGYGQPQPIP--GY 461

Query: 822  DQAQGYNSAPTYATGVN-LQDXXXXXXXXXXXPTQVPPSVQPAVGAQQGYSTQQPN-TPP 649
            DQ QGYNSA  Y    N  Q+             Q PPSVQP+   QQGY+TQQP+ +P 
Sbjct: 462  DQQQGYNSATGYGNVANPTQEGHTTSYGAQGETGQAPPSVQPSAIGQQGYNTQQPSPSPA 521

Query: 648  SYPTQAVQS---GYPPSSQPGYGAQMPATSGYGQSAPPTQPSYGPPQGQKAPSSQAIYGQ 478
            SYP Q       G PP+SQ G+G+Q PA SGY         +YGPPQ QKAP++  +YGQ
Sbjct: 522  SYPPQGSNQPAYGMPPTSQTGFGSQPPAQSGY-------TTNYGPPQAQKAPANPPVYGQ 574

Query: 477  TQP-PSSQPGYTQPATAQPVYAHAQSTPTHSGSAQSDSGHHRPPASGFGSAAPQAGYVQP 301
            TQ  PS+Q GY QPA  QP Y H+Q  P  SG AQ+DS   R   S +G+AA Q GY  P
Sbjct: 575  TQQSPSAQGGYAQPAPVQPGYPHSQQPPAQSGYAQTDSSSQRAAPSSYGTAAGQPGYGGP 634

Query: 300  QYGVXXXXXXXXXXXXXXXXXXXYAXXXXXXXXXXXXXXXXXXXXYGDSYAGAYTQPPVF 121
                                                         Y  SY G Y+QPP++
Sbjct: 635  S---------------------------AYSAPTVTQAGYGQQPPYSGSYGGGYSQPPMY 667

Query: 120  SGDGT 106
            + D T
Sbjct: 668  AADAT 672


>emb|CAN67283.1| hypothetical protein VITISV_021595 [Vitis vinifera]
          Length = 382

 Score =  285 bits (730), Expect = 6e-74
 Identities = 174/417 (41%), Positives = 202/417 (48%), Gaps = 12/417 (2%)
 Frame = -1

Query: 1320 MGGGYSQQGFRXXXXXXXXXXXXXXXXG---YGYMQPGAYPGAPPQYSMSQPPYTGYPPQ 1150
            M GGY QQG++                    Y Y QPG+YPG  PQY+MSQP Y GY  Q
Sbjct: 1    MAGGYPQQGYQARPPSGWGAPPGAPPMQQPGYSYAQPGSYPGPSPQYNMSQPAYAGYS-Q 59

Query: 1149 ATSTGWDXXXXXXXXXXXXXGGYDYYNQQP---QQPSTGGASAPADNTGYNYNQAPASNX 979
              +TGWD              GYDYY QQ    QQ + GG S PADN+GYNYNQ PAS  
Sbjct: 60   PNATGWDQTAAPPSQQTTPGSGYDYYGQQQTQQQQQAHGGPSGPADNSGYNYNQPPASGY 119

Query: 978  XXXXXXXXXXXXXXXXXXXXXXYTQDGYGSGYHAPAPQAGYGQPQANPQSGYDQAQGYNS 799
                                    QDGYG GYHAPAPQ GYGQPQ  P  GYDQ QGYNS
Sbjct: 120  NQQGQGYP----------------QDGYGGGYHAPAPQPGYGQPQPIP--GYDQQQGYNS 161

Query: 798  APTYATGVN-LQDXXXXXXXXXXXPTQVPPSVQPAVGAQQGYSTQQPN-TPPSYPTQAVQ 625
            A  Y    N  Q+             Q PPSVQP+   QQGY+TQQP+ +P SYP Q   
Sbjct: 162  ATGYGNVANPTQEGHTTSYGAQGETGQAPPSVQPSAIGQQGYNTQQPSPSPASYPPQGSN 221

Query: 624  S---GYPPSSQPGYGAQMPATSGYGQSAPPTQPSYGPPQGQKAPSSQAIYGQTQP-PSSQ 457
                G PP+SQ G+G+Q PA SGY         +YGPPQ QKAP++  +YGQTQ  PS+Q
Sbjct: 222  QPAYGMPPTSQTGFGSQPPAQSGY-------TTNYGPPQAQKAPANPPVYGQTQQSPSAQ 274

Query: 456  PGYTQPATAQPVYAHAQSTPTHSGSAQSDSGHHRPPASGFGSAAPQAGYVQPQYGVXXXX 277
             GY QPA  QP Y H+Q  P  SG AQ+DS   R   S +G+AA Q GY  P        
Sbjct: 275  GGYAQPAPVQPGYPHSQQPPAQSGYAQTDSSSQRAAPSSYGTAAGQPGYGGPS------- 327

Query: 276  XXXXXXXXXXXXXXXYAXXXXXXXXXXXXXXXXXXXXYGDSYAGAYTQPPVFSGDGT 106
                                                 Y  SY G Y+QPP+++ D T
Sbjct: 328  --------------------AYSAPTVTQAGYGQQPPYSGSYGGGYSQPPMYAADAT 364


>ref|XP_003544521.1| PREDICTED: uncharacterized protein LOC100813135 [Glycine max]
          Length = 670

 Score =  235 bits (600), Expect = 8e-59
 Identities = 166/433 (38%), Positives = 203/433 (46%), Gaps = 10/433 (2%)
 Frame = -1

Query: 1344 QNRVRNPSMGGGYSQQGFRXXXXXXXXXXXXXXXXG-YGYMQPGAYPGAPPQYSMSQPPY 1168
            +NR RNP+M GGYSQQG++                  YGY+QPGAY G PPQY+M Q  Y
Sbjct: 288  ENRHRNPAMSGGYSQQGYQARPPTSWGPPAAPMQQSGYGYVQPGAYSG-PPQYNMPQQQY 346

Query: 1167 TGYPPQAT----STGWDXXXXXXXXXXXXXGGYDYYNQQPQQPSTGGASAPADNTGYNYN 1000
             GYPPQ++    +T WD              GYDYY+QQ QQ      +  +D T YNY+
Sbjct: 347  AGYPPQSSGGYSATNWDQSTAPQQQSTHA--GYDYYSQQQQQ----NPAPSSDGTAYNYS 400

Query: 999  QAPASNXXXXXXXXXXXXXXXXXXXXXXXYTQDGYGSGYHAPAPQAGYGQPQANPQSGYD 820
            Q P+S                          QDGYG GYHAP PQ GYGQP +     YD
Sbjct: 401  QPPSSGYNQPGQGY----------------AQDGYG-GYHAP-PQLGYGQPPS-----YD 437

Query: 819  QAQGYNSAPTYATGVNLQDXXXXXXXXXXXPTQVPPSVQPAVGAQQGYSTQQPNTP--PS 646
            Q QGY+SAP+Y +    Q+            TQ PP+  P+    QGY T Q  +P   +
Sbjct: 438  QQQGYSSAPSYGSNP-AQEGHTANYGSQGDSTQAPPAQPPS----QGYGTSQQPSPNAAN 492

Query: 645  YPTQAVQSGY--PPSSQPG-YGAQMPATSGYGQSAPPTQPSYGPPQGQKAPSSQAIYGQT 475
            YP QA Q GY  PP+SQP  YG+Q PA SGYG         YGPPQ QK   +  +YGQ+
Sbjct: 493  YPPQA-QPGYGVPPTSQPAAYGSQPPAQSGYGSG-------YGPPQTQKPSGTPPVYGQS 544

Query: 474  QPPSSQPGYTQPATAQPVYAHAQSTPTHSGSAQSDSGHHRPPASGFGSAAPQAGYVQPQY 295
            Q P++  GY Q    Q  Y  +Q  P+  G AQ +SG  + P SG+G A  Q GY  P Y
Sbjct: 545  QSPNTAGGYGQSGHLQSGYPPSQPPPS-GGYAQPESGSQKAPPSGYGGAV-QPGYGPPSY 602

Query: 294  GVXXXXXXXXXXXXXXXXXXXYAXXXXXXXXXXXXXXXXXXXXYGDSYAGAYTQPPVFSG 115
            G                                          YG   AG Y QPPV+S 
Sbjct: 603  G---------------------GVPAGGQPGYGQAPPSYSNSSYG---AGGYAQPPVYSS 638

Query: 114  DGTVGSNSHGTYD 76
            DG  G  + GTYD
Sbjct: 639  DGNAGGTTRGTYD 651


>ref|XP_002516462.1| hypothetical protein RCOM_0798120 [Ricinus communis]
            gi|223544282|gb|EEF45803.1| hypothetical protein
            RCOM_0798120 [Ricinus communis]
          Length = 369

 Score =  231 bits (590), Expect = 1e-57
 Identities = 175/430 (40%), Positives = 203/430 (47%), Gaps = 15/430 (3%)
 Frame = -1

Query: 1320 MGGGYSQQGFRXXXXXXXXXXXXXXXXG-YGYMQPGAYPGAPPQYSMSQPPYTGYPPQAT 1144
            M GGY QQG++                  YGYMQPGAYPG   QY+MSQPPY GYPPQ +
Sbjct: 1    MAGGYPQQGYQSRPPSWGQPGAPQIQQPGYGYMQPGAYPGQSQQYNMSQPPYGGYPPQPS 60

Query: 1143 STG----WDXXXXXXXXXXXXXGGYDYYNQQ--PQQPSTGGASAPADNTGYNYNQAPASN 982
            S G    WD              GYDYYNQQ   QQP+ GG +APADNTGYNY+Q PAS 
Sbjct: 61   SGGYASNWD--QSNPTANQQTGQGYDYYNQQASQQQPTAGGPAAPADNTGYNYSQPPASG 118

Query: 981  XXXXXXXXXXXXXXXXXXXXXXXYTQDGYGSGYHAPAPQAGYGQPQANPQSGYDQAQGYN 802
                                     QDGYG GY    PQ+GYGQ    PQ  YDQ QGY 
Sbjct: 119  YNQQGQGYG----------------QDGYG-GY----PQSGYGQA---PQ--YDQQQGY- 151

Query: 801  SAPTYATGVN-LQDXXXXXXXXXXXPTQVPPSVQPAVGAQQGY-STQQPN-TPPSYPTQ- 634
             A TY    N  Q+            TQ P        +QQGY S QQP+  P SYP Q 
Sbjct: 152  -ASTYGNVANATQEGHTPSYGVQGDSTQAP--------SQQGYTSGQQPSPNPASYPPQG 202

Query: 633  AVQSGY--PPSSQPGYGAQMPATSGYGQSAPPTQPSYGPPQGQKAPSSQAIYGQT-QPPS 463
            + Q GY  PP+SQ GYG+Q  A  GYG        SYGPPQ QK P++  +YGQT Q PS
Sbjct: 203  STQPGYGIPPTSQSGYGSQPQAQPGYGS-------SYGPPQAQKPPANPPVYGQTQQSPS 255

Query: 462  SQPGYTQPATAQPVYAHAQSTPTHSGSAQSDSGHHRPPASGFGSAAPQAGYVQPQYGVXX 283
            +  GY QPA+ Q  Y H+Q  P  S   Q+DSG  R  ASG+G+   Q GY  P YG   
Sbjct: 256  TPGGYAQPASVQSGYPHSQPPP--SSYTQADSGPQR--ASGYGATGAQPGY-GPPYG--- 307

Query: 282  XXXXXXXXXXXXXXXXXYAXXXXXXXXXXXXXXXXXXXXYGDSYAGAYT-QPPVFSGDGT 106
                                                   Y  SYA  Y+ QP V+  DG+
Sbjct: 308  ------------------------STPGGQSGYGQGIPPYNTSYASGYSQQPAVYPTDGS 343

Query: 105  VGSNSHGTYD 76
              +N+  TYD
Sbjct: 344  GSNNARATYD 353


>ref|XP_002308576.1| predicted protein [Populus trichocarpa] gi|222854552|gb|EEE92099.1|
            predicted protein [Populus trichocarpa]
          Length = 385

 Score =  231 bits (588), Expect = 2e-57
 Identities = 173/436 (39%), Positives = 202/436 (46%), Gaps = 16/436 (3%)
 Frame = -1

Query: 1335 VRNPSMGGGYSQQGF--RXXXXXXXXXXXXXXXXGYGYMQPGAYPGAPPQYSMSQPPYTG 1162
            +RNP+MGGGY QQG+  R                GYGYMQ GAYPGA  QY+MSQP Y G
Sbjct: 1    MRNPNMGGGYPQQGYQARPPTNWGPSSAPPMQQAGYGYMQTGAYPGASAQYNMSQPAYQG 60

Query: 1161 YPPQATSTG----WDXXXXXXXXXXXXXGGYDYYNQQP--QQPSTGGASAPADNTGYNYN 1000
            YPPQ  S G    WD               YDYY+Q P  QQ + G ++APAD+TGYNY+
Sbjct: 61   YPPQQPSGGYPSNWDQSAVSANQQNQV---YDYYSQPPSSQQQTPGASAAPADSTGYNYS 117

Query: 999  QAPASNXXXXXXXXXXXXXXXXXXXXXXXYTQDGYGSGYHAPAPQAGYGQPQANPQSGYD 820
            QAPAS                         +QDGYG GY  P    GYGQP       YD
Sbjct: 118  QAPASGYNQQGQGY----------------SQDGYG-GYQQP----GYGQPPP-----YD 151

Query: 819  QAQGYNSAPTYATGVN-LQDXXXXXXXXXXXPTQVPPSVQPAVGAQQGYST-QQPN-TPP 649
            Q QGY +AP Y+   N  Q+             Q   S QP+   QQGYST QQP+  P 
Sbjct: 152  QQQGYTAAPNYSNVANPTQEGHTPSYGAQADSAQ--GSSQPSATGQQGYSTGQQPSPNPA 209

Query: 648  SYPTQ-AVQSGY--PPSSQPGYGAQMPATSGYGQSAPPTQPSYGPPQGQKAPSSQAIYGQ 478
            SYP+Q A Q GY  PPSSQ GYG Q PA             SYG PQ QK P++  +YGQ
Sbjct: 210  SYPSQGAAQPGYGLPPSSQAGYGGQPPA----------QYASYGAPQSQKPPANPPVYGQ 259

Query: 477  T-QPPSSQPGYTQPATAQPVYAHAQSTPTHSGSAQ-SDSGHHRPPASGFGSAAPQAGYVQ 304
            + Q PS+  GY QPA  QP Y  +Q  P  SG  Q  DSG  R   S +G+A  Q GY  
Sbjct: 260  SQQSPSTPGGYGQPA-GQPGYPPSQPPP--SGYVQPPDSGSQRAAPSSYGAAGAQPGYA- 315

Query: 303  PQYGVXXXXXXXXXXXXXXXXXXXYAXXXXXXXXXXXXXXXXXXXXYGDSYAGAYTQPPV 124
            P YG                                          Y  SY   Y QP  
Sbjct: 316  PTYGA---------------------------PPAGQPGYGQGAQPYNASYGSGYPQPAA 348

Query: 123  FSGDGTVGSNSHGTYD 76
            +S DG   +N+ GTY+
Sbjct: 349  YSADGNAANNARGTYE 364


Top