BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000895
         (1298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263085.1| PREDICTED: methyl-CpG-binding domain-contain...   344   3e-92
ref|XP_002331442.1| methyl binding domain protein [Populus trich...   320   4e-85
ref|XP_004150390.1| PREDICTED: methyl-CpG-binding domain-contain...   306   8e-81
ref|XP_003529090.1| PREDICTED: methyl-CpG-binding domain-contain...   306   1e-80
ref|XP_002308125.1| methyl binding domain protein [Populus trich...   305   2e-80

>ref|XP_002263085.1| PREDICTED: methyl-CpG-binding domain-containing protein 2 [Vitis
            vinifera] gi|297736061|emb|CBI24099.3| unnamed protein
            product [Vitis vinifera]
          Length = 354

 Score =  344 bits (883), Expect = 3e-92
 Identities = 181/311 (58%), Positives = 214/311 (68%), Gaps = 21/311 (6%)
 Frame = +1

Query: 325  QEKGQLAESSSPSLLEDTLEKPLNASLSGDDEEVELQIMEQENQSYDNGQNQLVLYNPEA 504
            +E+  L  SS P  L D L+ P++ S S ++EE      + +N SY+N  NQLV+Y+P A
Sbjct: 13   KEENDLTGSSLPRYL-DALQVPIDLSSSEEEEEDFYAEEDDDNHSYENTSNQLVVYDPVA 71

Query: 505  NGTVXXXXXXXXXXXXXXX----------SRVLPSVGAFTVQCASCFKWRLIPTKEKYEE 654
            N                            SRVLPSVGAFTVQCA+CFKWRLIPTKEKYEE
Sbjct: 72   NSATEVEPVPDPIQYRLPSFTGYSTTNAPSRVLPSVGAFTVQCANCFKWRLIPTKEKYEE 131

Query: 655  IRESILQIPFVCEIAREWRPDISCDDPADISQDGSRVWAIDKPNISQPPQGWKRELRIRG 834
            IRE IL+ PFVCE AREWRP++SCDDPADISQDGSR+WAIDKPNI+QPP GW+R LRIRG
Sbjct: 132  IREHILEQPFVCETAREWRPNVSCDDPADISQDGSRLWAIDKPNIAQPPAGWQRLLRIRG 191

Query: 835  EGSTRFADVYYMAPSGKRFRSMVEIQKYLLDHPEYLRDGVNMSQFSFQIPKPLQEDYVRK 1014
            EGST+FADVYY+APSGKR RSMVE+QKYLL+HPEY+  GV +SQFSFQIPKPLQE+YVRK
Sbjct: 192  EGSTKFADVYYVAPSGKRLRSMVEVQKYLLEHPEYMVHGVTLSQFSFQIPKPLQENYVRK 251

Query: 1015 RP----------RNEFSITRHLEPSDVNPLSWASPLNGSELQLGQPGMSATY-EEPVLPK 1161
            RP               ++R LEP +VNPLSWA P    +LQL  PG+SA Y E PV   
Sbjct: 252  RPARVNAGSYDDTTSSGMSRPLEPGEVNPLSWAGPAECIDLQLRTPGLSAPYFEAPVFDP 311

Query: 1162 APSGKKKASRS 1194
                 K+A R+
Sbjct: 312  VSRPTKQARRT 322


>ref|XP_002331442.1| methyl binding domain protein [Populus trichocarpa]
            gi|222873656|gb|EEF10787.1| methyl binding domain protein
            [Populus trichocarpa]
          Length = 343

 Score =  320 bits (821), Expect = 4e-85
 Identities = 170/322 (52%), Positives = 215/322 (66%), Gaps = 20/322 (6%)
 Frame = +1

Query: 289  ESNVRDASPIVKQEKGQLAESSSPSLLEDTLEKPLNASLSGDDEEVELQIMEQENQSYDN 468
            +S+  +   ++K+E      S     L  +L++P+  S S +++  +    + ++QS ++
Sbjct: 2    QSHPGETFHVLKKEGDDCTGSRYTGHLNSSLQEPIEVSSSSNEDNSD-DTWDIDDQSIED 60

Query: 469  GQNQLVLYNPEANGT---------VXXXXXXXXXXXXXXXSRVLPSVGAFTVQCASCFKW 621
               QLVLY+P AN           +               SRVLPSVGAFTVQCA CFKW
Sbjct: 61   SSKQLVLYDPLANDAGEIEPVPQPILSHHPFRRYSDLNVPSRVLPSVGAFTVQCAKCFKW 120

Query: 622  RLIPTKEKYEEIRESILQIPFVCEIAREWRPDISCDDPADISQDGSRVWAIDKPNISQPP 801
            RLIPTK+KYEE+RE IL+ PF CE AREWRPDISCDDP DI QDGSR+WAIDKPNI+QPP
Sbjct: 121  RLIPTKQKYEELREHILEEPFFCETAREWRPDISCDDPTDIDQDGSRLWAIDKPNIAQPP 180

Query: 802  QGWKRELRIRGEGSTRFADVYYMAPSGKRFRSMVEIQKYLLDHPEYLRDGVNMSQFSFQI 981
             GW+R LRIRGEGST+FADVYY APSGKR RSMVEIQKYL++HPEY+RDG+ ++QFSFQI
Sbjct: 181  PGWQRLLRIRGEGSTKFADVYYQAPSGKRLRSMVEIQKYLIEHPEYMRDGITLTQFSFQI 240

Query: 982  PKPLQEDYVR-KRPRNEFSITRHLEPSDVNPLSWASPLNGSELQLGQPGM-------SAT 1137
            PKPLQE+YVR KRPR   S    LEP + NPL W  P + +ELQLG+P +       S+ 
Sbjct: 241  PKPLQENYVRKKRPRLSASC---LEPGEANPLKWVGPGDCTELQLGRPAILPPPLIQSSA 297

Query: 1138 YEE---PVLPKAPSGKKKASRS 1194
            Y     PV  KA +  K++ R+
Sbjct: 298  YLPFYWPVKKKARTPSKQSHRT 319


>ref|XP_004150390.1| PREDICTED: methyl-CpG-binding domain-containing protein 2-like
            [Cucumis sativus]
          Length = 342

 Score =  306 bits (784), Expect = 8e-81
 Identities = 161/282 (57%), Positives = 191/282 (67%), Gaps = 15/282 (5%)
 Frame = +1

Query: 394  NASLSGDDEEVELQIMEQEN---QSYDNGQNQLVLYNPEANG---------TVXXXXXXX 537
            ++SLS    E EL     EN   QS DN   +LV+Y+P A+           V       
Sbjct: 32   SSSLSSSSSENELHETRNENVQSQSNDNPSRELVIYDPSADDGHANDPVSTPVKQQPSPV 91

Query: 538  XXXXXXXXSRVLPSVGAFTVQCASCFKWRLIPTKEKYEEIRESILQIPFVCEIAREWRPD 717
                    SRVLPSVGAFTVQCA CFKWRLIPTKEKYEEIRE +L+ PF CE AR WRPD
Sbjct: 92   LGHLTPNSSRVLPSVGAFTVQCAGCFKWRLIPTKEKYEEIREHLLEKPFYCETARGWRPD 151

Query: 718  ISCDDPADISQDGSRVWAIDKPNISQPPQGWKRELRIRGEGSTRFADVYYMAPSGKRFRS 897
            ISCDDPADI+QDGSR+WAIDKPNI+QPP GW+R L IRGEGST+FADVYY APSGK+ RS
Sbjct: 152  ISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYTAPSGKKLRS 211

Query: 898  MVEIQKYLLDHPEYLRDGVNMSQFSFQIPKPLQEDYVRKR--PRNEFSITRHLEPSDVNP 1071
            MV+IQKYL++HPEY  +GV+M++FSFQIPKPL+EDYVRKR    N       LE  +V P
Sbjct: 212  MVDIQKYLIEHPEYQTEGVSMTRFSFQIPKPLREDYVRKRRPNMNASCDASKLESGEVRP 271

Query: 1072 LSWASPLNGSELQLGQPGMSATYE-EPVLPKAPSGKKKASRS 1194
            +SWA P + + LQLG+PG++      PV        KK  R+
Sbjct: 272  ISWARPDDSTALQLGKPGLTELLSTSPVNNPVTRPAKKVKRA 313


>ref|XP_003529090.1| PREDICTED: methyl-CpG-binding domain-containing protein 2-like
            [Glycine max]
          Length = 309

 Score =  306 bits (783), Expect = 1e-80
 Identities = 163/301 (54%), Positives = 199/301 (66%), Gaps = 15/301 (4%)
 Frame = +1

Query: 322  KQEKGQLAESSSPSLLEDTLEKPLNASLSGDDEEVELQIMEQENQSYDNGQNQLVLYNPE 501
            K E   L  SS  S    +L  P++ S S DDE          +   D+  NQLVLY+P 
Sbjct: 11   KNEVKDLTGSSLTSYKHSSLLDPIDVSSSSDDEN---------DLPNDDVSNQLVLYDPV 61

Query: 502  ANGT----------VXXXXXXXXXXXXXXXSRVLPSVGAFTVQCASCFKWRLIPTKEKYE 651
            ANG                            RVLPSVGAFTVQCASCFKWRLIPTKEKYE
Sbjct: 62   ANGNNAIELAPDPLQCEHPLLPRSKPSHSVPRVLPSVGAFTVQCASCFKWRLIPTKEKYE 121

Query: 652  EIRESILQIPFVCEIAREWRPDISCDDPADISQDGSRVWAIDKPNISQPPQGWKRELRIR 831
            EIRE IL+ PFVC+ AREWRP +SCDDP DISQDGSRVWAIDKPNI+QPP GW+R LRIR
Sbjct: 122  EIREHILEQPFVCQKAREWRPHVSCDDPEDISQDGSRVWAIDKPNIAQPPAGWERLLRIR 181

Query: 832  GEGSTRFADVYYMAPSGKRFRSMVEIQKYLLDHPEYLRDGVNMSQFSFQIPKPLQEDYVR 1011
             EGS++FAD+YY+APSGKR RSMVEIQK+L++HPEY RDGV +SQFSFQIP+PLQE+YVR
Sbjct: 182  AEGSSKFADIYYIAPSGKRLRSMVEIQKFLMEHPEYTRDGVTLSQFSFQIPRPLQENYVR 241

Query: 1012 KRP---RNEFSITRHLEPSDVNPLSWASPL-NGSELQLGQPGMSATYE-EPVLPKAPSGK 1176
            KRP    + + ++  +E   V+PL+W  P  +G  L L  P    +++ +P+    PS +
Sbjct: 242  KRPARLTSSYEVSEPVEHEQVSPLAWVDPEGHGRRLGLPAPPFMESHDIDPISISRPSKR 301

Query: 1177 K 1179
            +
Sbjct: 302  Q 302


>ref|XP_002308125.1| methyl binding domain protein [Populus trichocarpa]
            gi|222854101|gb|EEE91648.1| methyl binding domain protein
            [Populus trichocarpa]
          Length = 328

 Score =  305 bits (781), Expect = 2e-80
 Identities = 161/318 (50%), Positives = 209/318 (65%), Gaps = 12/318 (3%)
 Frame = +1

Query: 289  ESNVRDASPIVKQEKGQLAESSSPSLLEDTLEKPLNASLSGDDEEVELQIMEQENQSYDN 468
            +S   +   +VK+E     +S     L+ TL++P+  S S +D   +    + ++ S ++
Sbjct: 2    QSRPEETIRMVKKEADCCTDSCHTGHLQSTLQEPIEVSSSNEDNSHDTG--DIDDPSIED 59

Query: 469  GQNQLVLYNPEANGT---------VXXXXXXXXXXXXXXXSRVLPSVGAFTVQCASCFKW 621
               QLVLY+P  NG          +               SRVLPSVG FTVQCA CFKW
Sbjct: 60   SSKQLVLYDPVTNGAGQIEPVPQPIQFQRPFRRYSDPNVPSRVLPSVGTFTVQCAKCFKW 119

Query: 622  RLIPTKEKYEEIRESILQIPFVCEIAREWRPDISCDDPADISQDGSRVWAIDKPNISQPP 801
            RLIPTK+KYEE+RE IL+ PF CE AR WRPDISCDDP DI+QDGSR+WAIDKPNI+QPP
Sbjct: 120  RLIPTKKKYEELREHILEEPFFCETARGWRPDISCDDPTDITQDGSRLWAIDKPNIAQPP 179

Query: 802  QGWKRELRIRGEGSTRFADVYYMAPSGKRFRSMVEIQKYLLDHPEYLRDGVNMSQFSFQI 981
             GW+R LRIRGEGS++FADVYY +PSGKR RSMVE+QKYL++HPEY+  GV +SQFSFQI
Sbjct: 180  PGWQRLLRIRGEGSSKFADVYYQSPSGKRLRSMVEVQKYLIEHPEYMTYGVTLSQFSFQI 239

Query: 982  PKPLQEDYVRKRPRN---EFSITRHLEPSDVNPLSWASPLNGSELQLGQPGMSATYEEPV 1152
            PKPLQE+YVRKR  +       TRHL+P +          + +ELQLG+P  S +++ PV
Sbjct: 240  PKPLQENYVRKRRPSISASCDYTRHLQPGEG---------DFTELQLGRPA-SPSFDRPV 289

Query: 1153 LPKAPSGKKKASRSPSPL 1206
              KA +  K+  R+ +P+
Sbjct: 290  KKKAGTQSKQDYRTANPV 307