BLASTX nr result

ID: Coptis23_contig00000862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000862
         (1010 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265343.1| PREDICTED: uncharacterized protein LOC100245...   354   2e-95
ref|XP_004144551.1| PREDICTED: transmembrane emp24 domain-contai...   347   3e-93
ref|XP_003618034.1| Transmembrane emp24 domain-containing protei...   347   3e-93
ref|XP_003618033.1| Transmembrane emp24 domain-containing protei...   347   3e-93
ref|XP_003574832.1| PREDICTED: transmembrane emp24 domain-contai...   344   2e-92

>ref|XP_002265343.1| PREDICTED: uncharacterized protein LOC100245903 isoform 2 [Vitis
           vinifera] gi|225447506|ref|XP_002265305.1| PREDICTED:
           uncharacterized protein LOC100245903 isoform 1 [Vitis
           vinifera] gi|296085048|emb|CBI28463.3| unnamed protein
           product [Vitis vinifera]
          Length = 214

 Score =  354 bits (908), Expect = 2e-95
 Identities = 166/202 (82%), Positives = 183/202 (90%)
 Frame = -1

Query: 917 LVVLAYLFSLQSVSGIRFVIDREECFSHSVESEGDTVHVSFVVIKADAPWHYSEDGVDLI 738
           +VV+  L  LQ V GIRFV+DRE+CFSH V+ EGDTVHVSFVVIKADA WHY+EDGVDL+
Sbjct: 13  IVVMLLLSDLQGVVGIRFVVDREDCFSHDVQYEGDTVHVSFVVIKADASWHYAEDGVDLV 72

Query: 737 VKGPSGDQIHGSRDKTSEKFEFVVHRKGLHQFCFTNKSPYHETIDFDVHVGHFTYFDQHA 558
           +KGPSGDQIH  RDKTSEKFEFV  +KGLH+FCFTNKSPY ETIDFDVHVGHFTY+DQHA
Sbjct: 73  IKGPSGDQIHDFRDKTSEKFEFVAQKKGLHRFCFTNKSPYQETIDFDVHVGHFTYYDQHA 132

Query: 557 KDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQTVVNEGMSKRAIHKAMFESATLIG 378
           KDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQ +VNEGMS+RA+HKAMFES  L+G
Sbjct: 133 KDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQAIVNEGMSQRAVHKAMFESVALVG 192

Query: 377 ASFLQVYLLKRLFERKLGTSRV 312
           AS LQ+YLL+RLFERKLG SRV
Sbjct: 193 ASVLQIYLLQRLFERKLGISRV 214


>ref|XP_004144551.1| PREDICTED: transmembrane emp24 domain-containing protein
           p24beta2-like [Cucumis sativus]
          Length = 214

 Score =  347 bits (890), Expect = 3e-93
 Identities = 163/214 (76%), Positives = 187/214 (87%), Gaps = 2/214 (0%)
 Frame = -1

Query: 947 MEIRSYKYVILVVLA--YLFSLQSVSGIRFVIDREECFSHSVESEGDTVHVSFVVIKADA 774
           ME  + ++V+++      L SL+   GIRFVIDREECFSH V+ EGDTVHVSFVVIKAD+
Sbjct: 1   MERWAMRFVMMMAFVGVLLLSLRKSEGIRFVIDREECFSHHVQYEGDTVHVSFVVIKADS 60

Query: 773 PWHYSEDGVDLIVKGPSGDQIHGSRDKTSEKFEFVVHRKGLHQFCFTNKSPYHETIDFDV 594
           PWHY +DGVDL++KGPSG+ +H  RDKTSEK EF+ H KGLH+FCFTNKSPYHETIDFDV
Sbjct: 61  PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV 120

Query: 593 HVGHFTYFDQHAKDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQTVVNEGMSKRAI 414
           HVGHF+Y +QHAKDEHFNPL++QI+KLEEALYNIQFEQHWLEAQTDRQ +VNEGM KRAI
Sbjct: 121 HVGHFSYHEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQAIVNEGMGKRAI 180

Query: 413 HKAMFESATLIGASFLQVYLLKRLFERKLGTSRV 312
           HKAMFESA L+GAS LQVYLL+RLFERKLGTSRV
Sbjct: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214


>ref|XP_003618034.1| Transmembrane emp24 domain-containing protein [Medicago truncatula]
           gi|355519369|gb|AET00993.1| Transmembrane emp24
           domain-containing protein [Medicago truncatula]
          Length = 213

 Score =  347 bits (889), Expect = 3e-93
 Identities = 159/204 (77%), Positives = 186/204 (91%)
 Frame = -1

Query: 923 VILVVLAYLFSLQSVSGIRFVIDREECFSHSVESEGDTVHVSFVVIKADAPWHYSEDGVD 744
           +++V++  L + +   GIRFVIDR+ECFSH V+ EGDTVHVSFVVIKAD+PWHY ++GVD
Sbjct: 10  MVIVLIGMLLNWKETEGIRFVIDRDECFSHDVKYEGDTVHVSFVVIKADSPWHYGDEGVD 69

Query: 743 LIVKGPSGDQIHGSRDKTSEKFEFVVHRKGLHQFCFTNKSPYHETIDFDVHVGHFTYFDQ 564
           L+VKGP+G+QI   RDKTS+KFEFV H+ G+H+FCFTNKSPYHETIDFDVHVGHF+YF+Q
Sbjct: 70  LVVKGPAGEQIQDFRDKTSDKFEFVAHKPGVHKFCFTNKSPYHETIDFDVHVGHFSYFEQ 129

Query: 563 HAKDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQTVVNEGMSKRAIHKAMFESATL 384
           HAKDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQ +VN+GMS+RA+HKA+FESA L
Sbjct: 130 HAKDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSRRAVHKAIFESAAL 189

Query: 383 IGASFLQVYLLKRLFERKLGTSRV 312
           IGAS LQVYLL+RLFERKLGTSRV
Sbjct: 190 IGASALQVYLLRRLFERKLGTSRV 213


>ref|XP_003618033.1| Transmembrane emp24 domain-containing protein [Medicago truncatula]
           gi|355519368|gb|AET00992.1| Transmembrane emp24
           domain-containing protein [Medicago truncatula]
           gi|388521389|gb|AFK48756.1| unknown [Medicago
           truncatula]
          Length = 214

 Score =  347 bits (889), Expect = 3e-93
 Identities = 159/204 (77%), Positives = 186/204 (91%)
 Frame = -1

Query: 923 VILVVLAYLFSLQSVSGIRFVIDREECFSHSVESEGDTVHVSFVVIKADAPWHYSEDGVD 744
           +++V++  L + +   GIRFVIDR+ECFSH V+ EGDTVHVSFVVIKAD+PWHY ++GVD
Sbjct: 11  MVIVLIGMLLNWKETEGIRFVIDRDECFSHDVKYEGDTVHVSFVVIKADSPWHYGDEGVD 70

Query: 743 LIVKGPSGDQIHGSRDKTSEKFEFVVHRKGLHQFCFTNKSPYHETIDFDVHVGHFTYFDQ 564
           L+VKGP+G+QI   RDKTS+KFEFV H+ G+H+FCFTNKSPYHETIDFDVHVGHF+YF+Q
Sbjct: 71  LVVKGPAGEQIQDFRDKTSDKFEFVAHKPGVHKFCFTNKSPYHETIDFDVHVGHFSYFEQ 130

Query: 563 HAKDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQTVVNEGMSKRAIHKAMFESATL 384
           HAKDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQ +VN+GMS+RA+HKA+FESA L
Sbjct: 131 HAKDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSRRAVHKAIFESAAL 190

Query: 383 IGASFLQVYLLKRLFERKLGTSRV 312
           IGAS LQVYLL+RLFERKLGTSRV
Sbjct: 191 IGASALQVYLLRRLFERKLGTSRV 214


>ref|XP_003574832.1| PREDICTED: transmembrane emp24 domain-containing protein A-like
           [Brachypodium distachyon]
          Length = 213

 Score =  344 bits (883), Expect = 2e-92
 Identities = 162/213 (76%), Positives = 187/213 (87%)
 Frame = -1

Query: 950 LMEIRSYKYVILVVLAYLFSLQSVSGIRFVIDREECFSHSVESEGDTVHVSFVVIKADAP 771
           +ME  S++   LVVL  L  L+  +GIRFVIDREECFSH+VE EGDTVHVSFVVIKAD P
Sbjct: 1   MMEALSWRTACLVVLCVLPFLRPAAGIRFVIDREECFSHNVEYEGDTVHVSFVVIKADTP 60

Query: 770 WHYSEDGVDLIVKGPSGDQIHGSRDKTSEKFEFVVHRKGLHQFCFTNKSPYHETIDFDVH 591
           WHYSEDGVDL+VK P+G Q+  SRDKTS+KF+F+V ++G+H+FCFTNKSPYHETIDFDVH
Sbjct: 61  WHYSEDGVDLVVKDPNGGQVRDSRDKTSDKFDFIVQKRGVHRFCFTNKSPYHETIDFDVH 120

Query: 590 VGHFTYFDQHAKDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQTVVNEGMSKRAIH 411
           VGHF+YF+QHAKDEHF PL EQIAKL+EALYNIQFEQHWLEAQTDRQ ++NE MSKRA+H
Sbjct: 121 VGHFSYFEQHAKDEHFAPLFEQIAKLDEALYNIQFEQHWLEAQTDRQAILNENMSKRAVH 180

Query: 410 KAMFESATLIGASFLQVYLLKRLFERKLGTSRV 312
           KA+ ESA LI AS +QVYLL+RLFERKLGTSRV
Sbjct: 181 KALIESAALIAASVIQVYLLRRLFERKLGTSRV 213


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