BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000694
         (794 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284178.1| PREDICTED: cyclin-H1-1 [Vitis vinifera] gi|2...    70   4e-10
gb|AAR07076.1| cyclin H-1 [Oryza sativa Japonica Group]                61   2e-07
ref|NP_001051203.1| Os03g0737600 [Oryza sativa Japonica Group] g...    61   2e-07
ref|XP_003560004.1| PREDICTED: cyclin-H1-1-like [Brachypodium di...    60   7e-07
gb|AAP03415.1| cyclin H-1 [Oryza sativa Japonica Group]                57   5e-06

>ref|XP_002284178.1| PREDICTED: cyclin-H1-1 [Vitis vinifera]
           gi|296089659|emb|CBI39478.3| unnamed protein product
           [Vitis vinifera]
          Length = 335

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 33/58 (56%), Positives = 43/58 (74%)
 Frame = -2

Query: 793 RYLGSIISRQQSMHTSSELIESLDLINCLLMRFSIPSSDDMKPIDRKLKYCLDPSLQD 620
           RYL SI+SRQ   H  SEL ESL+ I+  +M+  +P+++DMK IDRKLK+CLDPS  D
Sbjct: 251 RYLSSILSRQDFSHAFSELTESLNAIDSWVMKHQVPTTEDMKHIDRKLKFCLDPSSHD 308


>gb|AAR07076.1| cyclin H-1 [Oryza sativa Japonica Group]
          Length = 328

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 29/59 (49%), Positives = 41/59 (69%)
 Frame = -2

Query: 793 RYLGSIISRQQSMHTSSELIESLDLINCLLMRFSIPSSDDMKPIDRKLKYCLDPSLQDD 617
           RYL S+ SRQ S     + + S+++IN L+ +  IP+  DM+ IDRKLK+CLDPS QD+
Sbjct: 249 RYLESVFSRQHSDCPIEQFVGSINMINYLVEQLKIPTPKDMRHIDRKLKHCLDPSSQDE 307


>ref|NP_001051203.1| Os03g0737600 [Oryza sativa Japonica Group]
           gi|122246784|sp|Q10D80.1|CCH11_ORYSJ RecName:
           Full=Cyclin-H1-1; Short=CycH1;1; AltName:
           Full=Cyclin-H-1; Short=CycH-1 gi|9796396|dbj|BAB11694.1|
           cyclin H-1 [Oryza sativa] gi|108710969|gb|ABF98764.1|
           Cyclin, N-terminal domain containing protein, expressed
           [Oryza sativa Japonica Group]
           gi|113549674|dbj|BAF13117.1| Os03g0737600 [Oryza sativa
           Japonica Group] gi|215678822|dbj|BAG95259.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215740606|dbj|BAG97262.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218193718|gb|EEC76145.1| hypothetical protein
           OsI_13435 [Oryza sativa Indica Group]
           gi|222625758|gb|EEE59890.1| hypothetical protein
           OsJ_12494 [Oryza sativa Japonica Group]
          Length = 330

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 29/59 (49%), Positives = 41/59 (69%)
 Frame = -2

Query: 793 RYLGSIISRQQSMHTSSELIESLDLINCLLMRFSIPSSDDMKPIDRKLKYCLDPSLQDD 617
           RYL S+ SRQ S     + + S+++IN L+ +  IP+  DM+ IDRKLK+CLDPS QD+
Sbjct: 249 RYLESVFSRQHSDCPIEQFVGSINMINYLVEQLKIPTPKDMRHIDRKLKHCLDPSSQDE 307


>ref|XP_003560004.1| PREDICTED: cyclin-H1-1-like [Brachypodium distachyon]
          Length = 328

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 27/59 (45%), Positives = 41/59 (69%)
 Frame = -2

Query: 793 RYLGSIISRQQSMHTSSELIESLDLINCLLMRFSIPSSDDMKPIDRKLKYCLDPSLQDD 617
           RYLGS+ SRQ+S     + +++++ IN L+ +  IP+  DM+  DRKLK+CLDPS  D+
Sbjct: 249 RYLGSVFSRQKSNCPVEQFVQTINAINYLVDQLQIPTLKDMRHADRKLKHCLDPSSHDE 307


>gb|AAP03415.1| cyclin H-1 [Oryza sativa Japonica Group]
          Length = 328

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 29/59 (49%), Positives = 41/59 (69%)
 Frame = -2

Query: 793 RYLGSIISRQQSMHTSSELIESLDLINCLLMRFSIPSSDDMKPIDRKLKYCLDPSLQDD 617
           RYL S+ SRQ S     + + S+++IN L ++  IP+  DM+ IDRKLK+CLDPS QD+
Sbjct: 249 RYLESVFSRQHSDCPIEQFVGSINMINYLQLK--IPTPKDMRHIDRKLKHCLDPSSQDE 305