BLASTX nr result

ID: Coptis23_contig00000689 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000689
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO37754.1| delta-12 oleate desaturase [Punica granatum]           263   1e-68
ref|NP_001238358.1| omega-6 fatty acid desaturase, endoplasmic r...   261   3e-68
ref|XP_003554205.1| PREDICTED: omega-6 fatty acid desaturase, en...   261   4e-68
gb|ACU23285.1| unknown [Glycine max]                                  261   4e-68
dbj|BAD89862.1| microsomal omega-6 fatty acid desaturase [Glycin...   261   4e-68

>gb|AAO37754.1| delta-12 oleate desaturase [Punica granatum]
          Length = 387

 Score =  263 bits (672), Expect = 1e-68
 Identities = 120/143 (83%), Positives = 130/143 (90%)
 Frame = -1

Query: 429 VLHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKPKSKVSWFSKYFNNPPGRVLTLAV 250
           VLHS LLVPYFSWKYSHRRHHSNTGSLERDEVFVPKPKSK+ WFSKY NNPPGRV+TL V
Sbjct: 129 VLHSALLVPYFSWKYSHRRHHSNTGSLERDEVFVPKPKSKMPWFSKYLNNPPGRVMTLIV 188

Query: 249 TLLFGWPLYLAFNVSGRYYDRFACHFDPYGPIYNDRERLQIFISDAGIFAVTYGLFRLAA 70
           TL  GWPLYLA NVSGR YDRFACHFDPYGPIY DRERLQI+ISD GI A TY L+++AA
Sbjct: 189 TLTLGWPLYLALNVSGRPYDRFACHFDPYGPIYTDRERLQIYISDVGIMAATYTLYKIAA 248

Query: 69  AKGISWLICVYGVPLLIVNAFLV 1
           A+G++WL+CVYGVPLLIVNAFLV
Sbjct: 249 ARGLAWLVCVYGVPLLIVNAFLV 271


>ref|NP_001238358.1| omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2
           [Glycine max] gi|1345977|sp|P48631.1|FD6E2_SOYBN
           RecName: Full=Omega-6 fatty acid desaturase, endoplasmic
           reticulum isozyme 2 gi|904154|gb|AAB00860.1| microsomal
           omega-6 desaturase [Glycine max]
          Length = 383

 Score =  261 bits (668), Expect = 3e-68
 Identities = 118/143 (82%), Positives = 130/143 (90%)
 Frame = -1

Query: 429 VLHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKPKSKVSWFSKYFNNPPGRVLTLAV 250
           +LHS LLVPYFSWKYSHRRHHSNTGSLERDEVFVPK KS + W+SKY NNPPGRVLTLAV
Sbjct: 125 ILHSALLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSCIKWYSKYLNNPPGRVLTLAV 184

Query: 249 TLLFGWPLYLAFNVSGRYYDRFACHFDPYGPIYNDRERLQIFISDAGIFAVTYGLFRLAA 70
           TL  GWPLYLA NVSGR YDRFACH+DPYGPIY+DRERLQI+ISDAG+ AV YGLFRLA 
Sbjct: 185 TLTLGWPLYLALNVSGRPYDRFACHYDPYGPIYSDRERLQIYISDAGVLAVVYGLFRLAM 244

Query: 69  AKGISWLICVYGVPLLIVNAFLV 1
           AKG++W++CVYGVPLL+VN FLV
Sbjct: 245 AKGLAWVVCVYGVPLLVVNGFLV 267


>ref|XP_003554205.1| PREDICTED: omega-6 fatty acid desaturase, endoplasmic reticulum
           isozyme 2-like [Glycine max]
          Length = 383

 Score =  261 bits (667), Expect = 4e-68
 Identities = 118/143 (82%), Positives = 130/143 (90%)
 Frame = -1

Query: 429 VLHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKPKSKVSWFSKYFNNPPGRVLTLAV 250
           +LHS LLVPYFSWKYSHRRHHSNTGSLERDEVFVPK KS + W+SKY NNPPGRVLTLAV
Sbjct: 125 ILHSALLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSSIMWYSKYLNNPPGRVLTLAV 184

Query: 249 TLLFGWPLYLAFNVSGRYYDRFACHFDPYGPIYNDRERLQIFISDAGIFAVTYGLFRLAA 70
           TL  GWPLYLAFNVSGR YDRFACH+DPYGPIY+DRERLQI+ISDAG+ AV YGLF LA 
Sbjct: 185 TLTLGWPLYLAFNVSGRPYDRFACHYDPYGPIYSDRERLQIYISDAGVLAVCYGLFCLAM 244

Query: 69  AKGISWLICVYGVPLLIVNAFLV 1
           AKG++W++CVYGVPLL+VN FLV
Sbjct: 245 AKGLAWVVCVYGVPLLVVNGFLV 267


>gb|ACU23285.1| unknown [Glycine max]
          Length = 383

 Score =  261 bits (667), Expect = 4e-68
 Identities = 118/143 (82%), Positives = 130/143 (90%)
 Frame = -1

Query: 429 VLHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKPKSKVSWFSKYFNNPPGRVLTLAV 250
           +LHS LLVPYFSWKYSHRRHHSNTGSLERDEVFVPK KS + W+SKY NNPPGRVLTLAV
Sbjct: 125 ILHSALLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSSIMWYSKYLNNPPGRVLTLAV 184

Query: 249 TLLFGWPLYLAFNVSGRYYDRFACHFDPYGPIYNDRERLQIFISDAGIFAVTYGLFRLAA 70
           TL  GWPLYLAFNVSGR YDRFACH+DPYGPIY+DRERLQI+ISDAG+ AV YGLF LA 
Sbjct: 185 TLTLGWPLYLAFNVSGRPYDRFACHYDPYGPIYSDRERLQIYISDAGVLAVCYGLFCLAM 244

Query: 69  AKGISWLICVYGVPLLIVNAFLV 1
           AKG++W++CVYGVPLL+VN FLV
Sbjct: 245 AKGLAWVVCVYGVPLLVVNGFLV 267


>dbj|BAD89862.1| microsomal omega-6 fatty acid desaturase [Glycine max]
          Length = 383

 Score =  261 bits (667), Expect = 4e-68
 Identities = 119/143 (83%), Positives = 130/143 (90%)
 Frame = -1

Query: 429 VLHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKPKSKVSWFSKYFNNPPGRVLTLAV 250
           VLHS LLVPYFSWKYSHRRHHSNTGSLERDEVFVPK KS + W+SKY NNPPGRVLTLAV
Sbjct: 125 VLHSGLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSCIKWYSKYLNNPPGRVLTLAV 184

Query: 249 TLLFGWPLYLAFNVSGRYYDRFACHFDPYGPIYNDRERLQIFISDAGIFAVTYGLFRLAA 70
           TL  GWPLYLA NVSGR YDRFACH+DPYGPIY+DRERLQI+ISDAG+ AV YGLFRLA 
Sbjct: 185 TLTLGWPLYLALNVSGRPYDRFACHYDPYGPIYSDRERLQIYISDAGVLAVCYGLFRLAM 244

Query: 69  AKGISWLICVYGVPLLIVNAFLV 1
           AKG++W++CVYGVPLL+VN FLV
Sbjct: 245 AKGLAWVVCVYGVPLLVVNGFLV 267


Top