BLASTX nr result

ID: Coptis23_contig00000684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000684
         (1616 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310730.1| predicted protein [Populus trichocarpa] gi|2...   311   2e-82
ref|XP_002307261.1| predicted protein [Populus trichocarpa] gi|2...   295   2e-77
ref|XP_002523562.1| hypothetical protein RCOM_1407360 [Ricinus c...   294   5e-77
ref|XP_002277466.2| PREDICTED: B3 domain-containing protein Os01...   292   2e-76
emb|CAN61149.1| hypothetical protein VITISV_029172 [Vitis vinifera]   291   3e-76

>ref|XP_002310730.1| predicted protein [Populus trichocarpa] gi|222853633|gb|EEE91180.1|
            predicted protein [Populus trichocarpa]
          Length = 468

 Score =  311 bits (798), Expect = 2e-82
 Identities = 174/383 (45%), Positives = 233/383 (60%), Gaps = 3/383 (0%)
 Frame = +2

Query: 149  RAEEVKANLDPDSPSFVKSMQASSVT---WMHIPAQFCRLHLPKQDATITLVDENREEFL 319
            RAEEV++NL+P  PSFVKS+  S V    WM +P QFCR HLP  DAT+TL DE  +EF 
Sbjct: 94   RAEEVQSNLEPAFPSFVKSLVRSHVASCFWMGLPGQFCRAHLPHVDATVTLQDECGKEFK 153

Query: 320  TKFLVGKNGFSGGWKGFCDAHKLIEGDALIFQLVGPTKFQVYIVRAYSLGAIDGVIGLLT 499
             K++  K G S GW+ FC AH+L EGD L+FQL+    F+VY++RA  L  +DG +GLL 
Sbjct: 154  MKYIAYKTGLSAGWRQFCVAHRLFEGDVLVFQLIESCTFKVYVIRANDLTEVDGALGLLN 213

Query: 500  LDAHPKHSSQSKIVKTEGTVRKRRRTASLANLQPPTGEKSGSDSEDVTSEVLQGFRFSHD 679
            LDA  K +   K  K     RKR R+  LA +Q    +KSG     V        +  +D
Sbjct: 214  LDAQIKQNIAGKSSK-----RKRPRSLPLAIVQKKN-KKSGQPRPSVLQAGQPAEQSEND 267

Query: 680  YSEFKDVKKVLEGTRFSQDKSEFKDVKNLDSFSITVNGSILDSEFSESTRIKYFKLCSSQ 859
              E     +VLEG + S     FKD+K+ + F+I V+G +LDSE SE  R KY+KLC SQ
Sbjct: 268  SEEVGS--EVLEGFKLSLPAVHFKDIKSFEDFNILVDGLLLDSELSEDIRNKYYKLCCSQ 325

Query: 860  NAFLHENLLEGINAKLAAGAISEIVDIADAIKACRLSNSEDDFAAWDKSLGALEQLGMNV 1039
            NAFLH+NL++G+N KL AG ISE V+IADA++AC L+ S D+FA WDK+L A E  GMNV
Sbjct: 326  NAFLHDNLIKGVNLKLIAGIISETVNIADAMRACTLNTSRDEFATWDKALKASELFGMNV 385

Query: 1040 SFLRARLRRLLNITVESEEAADLXXXXXXXXXXXXXXXXXXTVKAKLSELEKTSKRLDTE 1219
             FLR++L  LL++  +SE A                      ++AKL EL++T +R   +
Sbjct: 386  GFLRSKLGLLLSLAFDSEGATKTRRYIEARFKRVRTEDEIRNLEAKLVELKETYERYGAD 445

Query: 1220 IEPLKEKARRHEVKLLAEVNSPW 1288
            +E LK KA  +E+K   +V +PW
Sbjct: 446  VERLKSKAEGYELKFQEQVLAPW 468


>ref|XP_002307261.1| predicted protein [Populus trichocarpa] gi|222856710|gb|EEE94257.1|
            predicted protein [Populus trichocarpa]
          Length = 456

 Score =  295 bits (756), Expect = 2e-77
 Identities = 166/392 (42%), Positives = 226/392 (57%), Gaps = 6/392 (1%)
 Frame = +2

Query: 131  KVCAKERAEEVKANLDPDSPSFVKSMQASSVT---WMHIPAQFCRLHLPKQDATITLVDE 301
            K  A  RAEEV++NL+P  PSFVKS+  S V    WM +P  FCR HLP  D T+TL DE
Sbjct: 84   KSSAMIRAEEVQSNLEPAFPSFVKSLVRSHVASCFWMGLPGTFCRAHLPSVDTTVTLQDE 143

Query: 302  NREEFLTKFLVGKNGFSGGWKGFCDAHKLIEGDALIFQLVGPTKFQVYIVRAYSLGAIDG 481
              +EF  K++  K G S GW+ FC AH+L EGDAL+FQL G    +VYI+RA  L  +D 
Sbjct: 144  CGKEFKMKYIAYKTGLSAGWRQFCVAHQLFEGDALVFQLTGSCTLKVYIIRANDLTEVDD 203

Query: 482  VIGLLTLDAHPKHSSQSKIVKTEGTVRKRRRTASLANLQPPTG---EKSGSDSEDVTSEV 652
               + T         + + +      +K +++  L    P  G   E+S +DSE+V SEV
Sbjct: 204  SAEMKTAACKSSKRKRPRSLPQAVVQKKNKKSGQLRLSVPQAGQPAEQSENDSEEVGSEV 263

Query: 653  LQGFRFSHDYSEFKDVKKVLEGTRFSQDKSEFKDVKNLDSFSITVNGSILDSEFSESTRI 832
            L+GF+ S                        FKD+K+ + F+I V+G +LDSE SE  R 
Sbjct: 264  LEGFKLS-------------------LPAVHFKDIKSFEDFNILVDGLVLDSELSEDIRN 304

Query: 833  KYFKLCSSQNAFLHENLLEGINAKLAAGAISEIVDIADAIKACRLSNSEDDFAAWDKSLG 1012
            KY+KLC +QNAFLH+NL++G+N KL AG ISE V+IADA++AC L+ S D FA WDK+L 
Sbjct: 305  KYYKLCCNQNAFLHDNLIKGVNFKLIAGIISETVNIADAMRACTLTTSRDKFATWDKALK 364

Query: 1013 ALEQLGMNVSFLRARLRRLLNITVESEEAADLXXXXXXXXXXXXXXXXXXTVKAKLSELE 1192
            A E  GMNV FLRARL RLL++  +SE A                     +++AKL EL+
Sbjct: 365  ASELFGMNVGFLRARLSRLLSLAFDSEGATKTRRYLEARFERVLTEDEIKSLEAKLVELK 424

Query: 1193 KTSKRLDTEIEPLKEKARRHEVKLLAEVNSPW 1288
            +  +R    +E LK KA  +++K   +V +PW
Sbjct: 425  EAYERYGANVERLKSKAEGYDLKFQEQVLAPW 456


>ref|XP_002523562.1| hypothetical protein RCOM_1407360 [Ricinus communis]
            gi|223537124|gb|EEF38757.1| hypothetical protein
            RCOM_1407360 [Ricinus communis]
          Length = 529

 Score =  294 bits (752), Expect = 5e-77
 Identities = 179/450 (39%), Positives = 242/450 (53%), Gaps = 57/450 (12%)
 Frame = +2

Query: 110  LPDDDKAKVCAKERAEEVKANLDPDSPSFVKSMQASSVT---WMHIPAQFCRLHLPKQDA 280
            L +  + K  A  RAEEV++NL+   PSFVKS+  S V    WM +P  FCR HLP++D 
Sbjct: 99   LTNPGEVKSAAMIRAEEVQSNLESTYPSFVKSLVRSHVGSCFWMGLPGPFCRAHLPREDT 158

Query: 281  TITLVDENREEFLTKFLVGKNGFSGGWKGFCDAHKLIEGDALIFQLVGPTKFQVYIVRAY 460
             + L DE  +    K++  K G S GW+ F  AH+L+EGD L+FQL+GP KF+VYI+RA 
Sbjct: 159  VVFLEDECGKVMGMKYIGYKTGLSAGWRQFAVAHQLLEGDVLVFQLIGPCKFKVYIIRAN 218

Query: 461  SLGAIDGVIGLLTLDAHPKHSSQSKIVKT------------------------------- 547
             L  +DG +GLLTLD   K +   K+V                                 
Sbjct: 219  DLAEVDGALGLLTLDPQIKQNDAGKLVDVFVLQNFLSCMSLLTDPYCIWMPKIETIKDNA 278

Query: 548  -------EGTVRKRRRTASLANLQ-------------PPTG---EKSGSDSEDVTSEVLQ 658
                       RKR R+  LA +Q             P TG   E+S +DSE+V SEVL+
Sbjct: 279  EMATVACTSAKRKRPRSLPLAVVQKNNKKSSRSRLSVPKTGQLAEQSENDSEEVGSEVLE 338

Query: 659  GFRFSHDYSEFKDVKKVLEGTRFSQDKSEFKDVKNLDSFSITVNGSILDSEFSESTRIKY 838
            GF+ S                       +F+DVK+ ++F+I V+G +LDSE SE  R KY
Sbjct: 339  GFKLS-------------------LPAVQFEDVKSFENFNILVDGLVLDSELSEDIRRKY 379

Query: 839  FKLCSSQNAFLHENLLEGINAKLAAGAISEIVDIADAIKACRLSNSEDDFAAWDKSLGAL 1018
            +KLC SQNAFLHE+L++GIN KL AG ISE V+IADAI+A  L+ S D+F  WDK+L A 
Sbjct: 380  YKLCCSQNAFLHESLIKGINFKLIAGIISETVNIADAIRASNLTTSSDEFDTWDKTLNAS 439

Query: 1019 EQLGMNVSFLRARLRRLLNITVESEEAADLXXXXXXXXXXXXXXXXXXTVKAKLSELEKT 1198
            EQ GM V FLRARL +L+++  +SE A                      ++AKL EL+  
Sbjct: 440  EQFGMKVGFLRARLSQLVSLAFDSEGATKTRRYIEARTERVNTEDEIRNLEAKLEELKAA 499

Query: 1199 SKRLDTEIEPLKEKARRHEVKLLAEVNSPW 1288
            +++   +IE LK KA  +E+K   EV +PW
Sbjct: 500  NEKFGADIESLKLKAESYEIKFQEEVLAPW 529


>ref|XP_002277466.2| PREDICTED: B3 domain-containing protein Os01g0234100-like [Vitis
            vinifera]
          Length = 505

 Score =  292 bits (747), Expect = 2e-76
 Identities = 174/429 (40%), Positives = 243/429 (56%), Gaps = 27/429 (6%)
 Frame = +2

Query: 83   SSSHKRKQVLPDDD----KAKVCAKERAEEVKANLDPDSPSFVKSMQASSVT---WMHIP 241
            S+S KR +   D      KAK  A  RAEEV++NL P+ PSFVK +  S V+   WM +P
Sbjct: 99   SASRKRNKAAVDGSCTPLKAKTSALIRAEEVQSNLGPEFPSFVKVLVRSHVSSCFWMGLP 158

Query: 242  AQFCRLHLPKQDATITLVDENREEFLTKFLVGKNGFSGGWKGFCDAHKLIEGDALIFQLV 421
              FC +HLPK+D  ITL DE+      K++  K G S GW+ F   HKL+EGD L+F LV
Sbjct: 159  GPFCDMHLPKKDVIITLEDESGAACQIKYIADKTGLSAGWRRFSMDHKLLEGDVLVFHLV 218

Query: 422  GPTKFQVYIVRAYSLGAIDGVIGLLTLDAHPKH-----------------SSQSKIVKTE 550
             PT F+VYI+RA  L  +DG +GLL LD H K+                 SS+ K  K+ 
Sbjct: 219  EPTSFKVYIIRANDLTEVDGALGLLELDTHTKNDAGKLVAVSDLDTVACKSSKRKHSKSL 278

Query: 551  GTV---RKRRRTASLANLQPPTGEKSGSDSEDVTSEVLQGFRFSHDYSEFKDVKKVLEGT 721
              V   +K R+T S+ NL     E+S +DSE   SEVL                   EG+
Sbjct: 279  PLVVFQKKNRKTGSIPNLMQR--EQSENDSEGNGSEVL-------------------EGS 317

Query: 722  RFSQDKSEFKDVKNLDSFSITVNGSILDSEFSESTRIKYFKLCSSQNAFLHENLLEGINA 901
            +F +   +FKD+ + D+F+I V+G ++DSE  E TR KY++LC SQNAFLHE ++EG+N 
Sbjct: 318  KFFEPAVQFKDI-SFDNFNILVDGLLIDSELPEDTRAKYYELCCSQNAFLHEKIVEGLNC 376

Query: 902  KLAAGAISEIVDIADAIKACRLSNSEDDFAAWDKSLGALEQLGMNVSFLRARLRRLLNIT 1081
            +L A  IS+ V IADA++AC+L+ S  +F  W+++L A E LGMNV FL+ARL  L+++ 
Sbjct: 377  RLIAEIISQTVQIADALRACKLTTSRVEFTNWERTLKAFEVLGMNVGFLQARLDHLVSLA 436

Query: 1082 VESEEAADLXXXXXXXXXXXXXXXXXXTVKAKLSELEKTSKRLDTEIEPLKEKARRHEVK 1261
             +SE A                      ++ KL EL+  S+R+D +IE LKE    H ++
Sbjct: 437  FDSEGAMYSRQYMEVTIERAHAEDEMRDLEDKLMELKAASERMDADIETLKEAVENHVIR 496

Query: 1262 LLAEVNSPW 1288
               E+ +PW
Sbjct: 497  FQEEIVAPW 505


>emb|CAN61149.1| hypothetical protein VITISV_029172 [Vitis vinifera]
          Length = 554

 Score =  291 bits (746), Expect = 3e-76
 Identities = 174/429 (40%), Positives = 243/429 (56%), Gaps = 27/429 (6%)
 Frame = +2

Query: 83   SSSHKRKQVLPDDD----KAKVCAKERAEEVKANLDPDSPSFVKSMQASSVT---WMHIP 241
            S+S KR +   D      KAK  A  RAEEV++NL P+ PSFVK +  S V+   WM +P
Sbjct: 148  SASRKRNKAAVDGSCXPLKAKTSALIRAEEVQSNLGPEFPSFVKVLVRSHVSSCFWMGLP 207

Query: 242  AQFCRLHLPKQDATITLVDENREEFLTKFLVGKNGFSGGWKGFCDAHKLIEGDALIFQLV 421
              FC +HLPK+D  ITL DE+      K++  K G S GW+ F   HKL+EGD L+F LV
Sbjct: 208  GPFCDMHLPKKDVIITLEDESGAACQIKYIADKTGLSAGWRRFSMDHKLLEGDVLVFHLV 267

Query: 422  GPTKFQVYIVRAYSLGAIDGVIGLLTLDAHPKH-----------------SSQSKIVKTE 550
             PT F+VYI+RA  L  +DG +GLL LD H K+                 SS+ K  K+ 
Sbjct: 268  EPTAFKVYIIRANDLTEVDGALGLLELDTHTKNDAGKLVAVSDLDTVACKSSKRKHSKSL 327

Query: 551  GTV---RKRRRTASLANLQPPTGEKSGSDSEDVTSEVLQGFRFSHDYSEFKDVKKVLEGT 721
              V   +K R+T S+ NL     E+S +DSE   SEVL                   EG+
Sbjct: 328  PLVVFQKKNRKTGSIPNLMQR--EQSENDSEGNGSEVL-------------------EGS 366

Query: 722  RFSQDKSEFKDVKNLDSFSITVNGSILDSEFSESTRIKYFKLCSSQNAFLHENLLEGINA 901
            +F +   +FKD+ + D+F+I V+G ++DSE  E TR KY++LC SQNAFLHE ++EG+N 
Sbjct: 367  KFFEPAVQFKDI-SFDNFNILVDGLLIDSELPEDTRAKYYELCCSQNAFLHEKIVEGLNC 425

Query: 902  KLAAGAISEIVDIADAIKACRLSNSEDDFAAWDKSLGALEQLGMNVSFLRARLRRLLNIT 1081
            +L A  IS+ V IADA++AC+L+ S  +F  W+++L A E LGMNV FL+ARL  L+++ 
Sbjct: 426  RLIAEIISQTVQIADALRACKLTTSRVEFTNWERTLKAFEVLGMNVGFLQARLDHLVSLA 485

Query: 1082 VESEEAADLXXXXXXXXXXXXXXXXXXTVKAKLSELEKTSKRLDTEIEPLKEKARRHEVK 1261
             +SE A                      ++ KL EL+  S+R+D +IE LKE    H ++
Sbjct: 486  FDSEGAMYSRQYMEVTIERAHAEDEMRDLEDKLMELKAASERMDADIETLKEAVENHVIR 545

Query: 1262 LLAEVNSPW 1288
               E+ +PW
Sbjct: 546  FQEEIVAPW 554


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