BLASTX nr result
ID: Coptis23_contig00000675
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00000675
(2047 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281446.1| PREDICTED: riboflavin biosynthesis protein r... 721 0.0
ref|XP_002299894.1| predicted protein [Populus trichocarpa] gi|2... 702 0.0
ref|XP_002534352.1| GTP cyclohydrolase II, putative [Ricinus com... 701 0.0
ref|XP_003547454.1| PREDICTED: riboflavin biosynthesis protein r... 698 0.0
ref|XP_003568299.1| PREDICTED: riboflavin biosynthesis protein r... 666 0.0
>ref|XP_002281446.1| PREDICTED: riboflavin biosynthesis protein ribBA, chloroplastic
[Vitis vinifera] gi|297746140|emb|CBI16196.3| unnamed
protein product [Vitis vinifera]
Length = 519
Score = 721 bits (1861), Expect = 0.0
Identities = 376/519 (72%), Positives = 417/519 (80%), Gaps = 4/519 (0%)
Frame = +1
Query: 139 MICLLLQRPLAPQIAINSCFHCSIASSQSLIIK----LNRSNFLKYGCQAIXXXXXXXXX 306
M +L PL P I I+S F S+A+ QS+ + L+R + C A+
Sbjct: 1 MDSVLFPHPLFPHIFISSSFPRSLAAPQSIGVGIGVGLSRHRWCST-CWAVGVSGVGAGN 59
Query: 307 XXXXXXXXSNQNGSILESLNESTKATFRTLNAEITQETIDFFVSDAKGDPDCPTEGFSSI 486
+N+NGS+L +L T A F TL+AEIT ETIDFFVSDA+GDPD P+EGFSSI
Sbjct: 60 VFDKIPLKANENGSVLGALEGPTSAPFGTLDAEITPETIDFFVSDAEGDPDSPSEGFSSI 119
Query: 487 EQALNTLPQGKFVIAIDDEKEDVEGNLVMAASLIKPQTMSFMVKHGSGIVSVGMKEEDLE 666
EQALNTL QGKFVI +DDE EGNLVMAASL P+ M+FMVKHGSGIVSVGMKEE LE
Sbjct: 120 EQALNTLRQGKFVIVVDDEIGKAEGNLVMAASLTSPRDMAFMVKHGSGIVSVGMKEEHLE 179
Query: 667 RXXXXXXXXXXXXXXXXXXAYTVTVDAKVGVSTGVSASDRAKTVLALSSSHSKPEDFRRP 846
R +T+TVDAK G STGVSASDRAKTVLALSS S P+DFRRP
Sbjct: 180 RLKLPLMSPDSEDKDSSAPTFTITVDAKAGTSTGVSASDRAKTVLALSSPISTPQDFRRP 239
Query: 847 GHVFPLMYRNGGVLSRAGHTEASVDLVSLAGLPPISALSAIIDAEDGSIARLPFLRKMAL 1026
GHVFPL YR GGVL RAGHTEASVDLV LAGL PIS LSAI+D +DGSIA LP LRK+AL
Sbjct: 240 GHVFPLKYREGGVLRRAGHTEASVDLVMLAGLQPISVLSAIVDGDDGSIATLPSLRKLAL 299
Query: 1027 EYGLLIVSITDLIRYRRKREKLVERIAVSRLPTKWGLFQAYCYRSKLDGTEHIAIVKGSI 1206
E+ + +VSITDLIRYRRKREKLVER A+SRLPTKWGLFQAYCYRSKLDGTEH+AIVKGSI
Sbjct: 300 EHSIPMVSITDLIRYRRKREKLVERTAISRLPTKWGLFQAYCYRSKLDGTEHVAIVKGSI 359
Query: 1207 GYGQDILVRVHSECLTGDIFGSARCDCGNQLALAVQVVEQAGRGVVLYLRGHEGRGIGLG 1386
G GQD+LVRVHSECLTGDIFGSARCDCGNQL LA+Q+VEQAGRGVV+YLRGHEGRGIGLG
Sbjct: 360 GQGQDVLVRVHSECLTGDIFGSARCDCGNQLDLAMQLVEQAGRGVVVYLRGHEGRGIGLG 419
Query: 1387 HKLMAYNLQDQGHDTVEANLELGFSADARDYGIGAQILRDIGVRTMRLMTNNPAKFTGLK 1566
HKL AYNLQD+GHDTVEANLELG + DAR+YGIGAQILRDIGVRTM+LMTNNPAKFTGLK
Sbjct: 420 HKLRAYNLQDEGHDTVEANLELGLAVDAREYGIGAQILRDIGVRTMQLMTNNPAKFTGLK 479
Query: 1567 GYGLAVVGRVPVISPITEENKRYLETKRTKMGHIYGSDI 1683
GYGLAVVGRVPV++PITEENK+YLETKRTKMGHIYGSDI
Sbjct: 480 GYGLAVVGRVPVLTPITEENKKYLETKRTKMGHIYGSDI 518
>ref|XP_002299894.1| predicted protein [Populus trichocarpa] gi|222847152|gb|EEE84699.1|
predicted protein [Populus trichocarpa]
Length = 441
Score = 702 bits (1811), Expect = 0.0
Identities = 347/439 (79%), Positives = 385/439 (87%)
Frame = +1
Query: 367 ESTKATFRTLNAEITQETIDFFVSDAKGDPDCPTEGFSSIEQALNTLPQGKFVIAIDDEK 546
ES A F TL+AEIT ETIDFFVSDA+GDPDCPTEG+SSIEQALNTL +GKFVI +DDE
Sbjct: 1 ESASAPFLTLDAEITPETIDFFVSDAEGDPDCPTEGYSSIEQALNTLREGKFVIVVDDEN 60
Query: 547 EDVEGNLVMAASLIKPQTMSFMVKHGSGIVSVGMKEEDLERXXXXXXXXXXXXXXXXXXA 726
D+EGNL+MAASL PQ +SF++K+GSGIVSVGMKEEDLER
Sbjct: 61 GDIEGNLIMAASLTSPQHVSFLIKNGSGIVSVGMKEEDLERLKLPLMSPETENEDSSAPT 120
Query: 727 YTVTVDAKVGVSTGVSASDRAKTVLALSSSHSKPEDFRRPGHVFPLMYRNGGVLSRAGHT 906
+T+TVDAK G TGVSASDRAKTVLALSS +KPEDFRRPGHVFPL YRNGGVL RAGHT
Sbjct: 121 FTITVDAKSGTCTGVSASDRAKTVLALSSPETKPEDFRRPGHVFPLKYRNGGVLRRAGHT 180
Query: 907 EASVDLVSLAGLPPISALSAIIDAEDGSIARLPFLRKMALEYGLLIVSITDLIRYRRKRE 1086
EASVDLV LAGLPP+S LSAIID EDGSIA L +RK+A+E+ + IVSITDLIRYRRKRE
Sbjct: 181 EASVDLVMLAGLPPVSVLSAIIDPEDGSIASLADIRKLAMEHNIPIVSITDLIRYRRKRE 240
Query: 1087 KLVERIAVSRLPTKWGLFQAYCYRSKLDGTEHIAIVKGSIGYGQDILVRVHSECLTGDIF 1266
LVER A+SRLPTKWGLF+AYCYRSKL+GTEH+AIVKG+IG GQD+LVRVHSECLTGDIF
Sbjct: 241 YLVERSAISRLPTKWGLFEAYCYRSKLEGTEHVAIVKGNIGDGQDVLVRVHSECLTGDIF 300
Query: 1267 GSARCDCGNQLALAVQVVEQAGRGVVLYLRGHEGRGIGLGHKLMAYNLQDQGHDTVEANL 1446
GSARCDCGNQL LA+Q++EQAGRG+V+YLRGHEGRGIGLGHKL AYNLQDQGHDTV+AN+
Sbjct: 301 GSARCDCGNQLDLAMQLIEQAGRGIVVYLRGHEGRGIGLGHKLRAYNLQDQGHDTVQANI 360
Query: 1447 ELGFSADARDYGIGAQILRDIGVRTMRLMTNNPAKFTGLKGYGLAVVGRVPVISPITEEN 1626
ELG + DAR+YGIGAQILRDIGVRTMRLMTNNPAKFTGLKGYGLAV+GRVPV +PITEEN
Sbjct: 361 ELGLAVDAREYGIGAQILRDIGVRTMRLMTNNPAKFTGLKGYGLAVIGRVPVFTPITEEN 420
Query: 1627 KRYLETKRTKMGHIYGSDI 1683
KRYLETKRTKMGH+YGSDI
Sbjct: 421 KRYLETKRTKMGHVYGSDI 439
>ref|XP_002534352.1| GTP cyclohydrolase II, putative [Ricinus communis]
gi|223525444|gb|EEF28032.1| GTP cyclohydrolase II,
putative [Ricinus communis]
Length = 538
Score = 701 bits (1809), Expect = 0.0
Identities = 361/527 (68%), Positives = 411/527 (77%), Gaps = 4/527 (0%)
Frame = +1
Query: 172 PQIAINSCFHCSIASS-QSLIIKLNRSNFLKYGCQAIXXXXXXXXXXXXXXXXXSNQNGS 348
P I INS FH + S+ S I + F C A ++NGS
Sbjct: 12 PHIFINSSFHKQLFSAPHSTGIGPYKHKFSSPTCWATGVTGIGAGNLSDDSSSKGSENGS 71
Query: 349 ILESLNESTKATFRTLNAEITQETIDFFVSDAKGDPDCPTEGFSSIEQALNTLPQGKFVI 528
+L S +EST A F TL+AEIT ETIDFFVSDA+GDPDCPT G+SSIEQALNTL QGKFVI
Sbjct: 72 LLGSFHESTSAPFGTLDAEITPETIDFFVSDAEGDPDCPTPGYSSIEQALNTLRQGKFVI 131
Query: 529 AIDDEKEDVEGNLVMAASLIKPQTMSFMVKHGSGIVSVGMKEEDLERXXXXXXXXXXXXX 708
+DDE D+EGN+VMAASL P+ ++FMVKHGSGIVSV M +DL R
Sbjct: 132 VVDDENGDIEGNIVMAASLTSPKQVAFMVKHGSGIVSVSMTVDDLNRLKLPLMSPESEDE 191
Query: 709 XXXXXAYTVTVDAKVGVSTGVSASDRAKTVLALSSSHSKPEDFRRPGHVFPLMYRNGGVL 888
+T TVDA+ G STGVSA+DRAKTV+AL+S SKPEDFRRPGHVFPL YRNGGVL
Sbjct: 192 DSSAPTFTTTVDARTGTSTGVSAADRAKTVVALASPESKPEDFRRPGHVFPLKYRNGGVL 251
Query: 889 SRAGHTEASVDLVSLAGLPPISALSAIIDAEDGSIARLPFLRKMALEYGLLIVSITDLIR 1068
RAGHTEAS+DL+ LAGL P+S LSAI+D +DGS+A L L K+A EY + +VSITD+IR
Sbjct: 252 RRAGHTEASIDLLILAGLRPVSVLSAIVDPDDGSMASLSSLTKLASEYSIPVVSITDIIR 311
Query: 1069 YRRKREKLVERIAVSRLPTKWGLFQAYCYRSKLDGTEHIAIVKGSIGYGQDILVRVHSEC 1248
YRRKRE LVER AVSRLPTKWGLFQAYCYRSKLDGTEHIAIVKG IG G+D+LVRVHSEC
Sbjct: 312 YRRKRENLVERTAVSRLPTKWGLFQAYCYRSKLDGTEHIAIVKGDIGDGEDVLVRVHSEC 371
Query: 1249 LTGDIFGSARCDCGNQLALAVQVVEQAGRGVVLYLRGHEGRGIGLGHKLMAYNLQDQGHD 1428
LTGDIFGS RCDCGNQL LA+Q++EQAGRGVV+YLRGHEGRGIGLGHKL AYNLQDQGHD
Sbjct: 372 LTGDIFGSGRCDCGNQLNLAMQLIEQAGRGVVIYLRGHEGRGIGLGHKLRAYNLQDQGHD 431
Query: 1429 TVEANLELGFSADARDYGIGAQILRDIGVRTMRLMTNNPAKFTGLKGYGLAVVGRVPVIS 1608
TV+AN+ELG + DAR+YGIGAQILRD+ VRTMRLMTNNPAKFTGLKGYGLAV+GRVPV++
Sbjct: 432 TVQANIELGLAVDAREYGIGAQILRDVRVRTMRLMTNNPAKFTGLKGYGLAVIGRVPVLT 491
Query: 1609 PITEENKRYLETKRTKMGHIYGSDISS--AGFPDP-IVNPKDRVEED 1740
PITEENK+YLETKRTKMGHIYGSD+ GF +P I N D EE+
Sbjct: 492 PITEENKKYLETKRTKMGHIYGSDLQGPLTGFINPDINNSTDSPEEE 538
>ref|XP_003547454.1| PREDICTED: riboflavin biosynthesis protein ribBA, chloroplastic-like
[Glycine max]
Length = 533
Score = 698 bits (1802), Expect = 0.0
Identities = 350/471 (74%), Positives = 399/471 (84%), Gaps = 4/471 (0%)
Frame = +1
Query: 334 NQNGSILESLN--ESTKATFRTLNAEITQETIDFFVSDAKGDPDCPTEGFSSIEQALNTL 507
N+NGS+L +LN ES+ A+F TL+AE+T ET DFFVSDA+GDPDCP++G+SSIE+ALN L
Sbjct: 61 NENGSLLGALNNNESSSASFETLDAELTPETTDFFVSDAEGDPDCPSKGYSSIERALNAL 120
Query: 508 PQGKFVIAIDDEKEDVEGNLVMAASLIKPQTMSFMVKHGSGIVSVGMKEEDLERXXXXXX 687
QGKFVI +DDE D+EGNL+MAASL P+ ++FM+KHGSGIVSVGMKEEDL+R
Sbjct: 121 RQGKFVIVVDDENGDIEGNLIMAASLTSPKDIAFMIKHGSGIVSVGMKEEDLQRLNLPLM 180
Query: 688 XXXXXXXXXXXXAYTVTVDAKVGVSTGVSASDRAKTVLALSSSHSKPEDFRRPGHVFPLM 867
+T+TVD K G STGVSA+DRAKTVLALSS SK EDFR+PGHVFPL
Sbjct: 181 SPETEDEDSSAPTFTITVDVKSGTSTGVSAADRAKTVLALSSPESKSEDFRKPGHVFPLK 240
Query: 868 YRNGGVLSRAGHTEASVDLVSLAGLPPISALSAIIDAEDGSIARLPFLRKMALEYGLLIV 1047
YRNGGVL RAGHTEAS+DLV+LAGLPPIS LSA++D DGS+ L LRK+A EY L IV
Sbjct: 241 YRNGGVLRRAGHTEASLDLVALAGLPPISVLSALVDENDGSMQSLLNLRKLASEYTLPIV 300
Query: 1048 SITDLIRYRRKREKLVERIAVSRLPTKWGLFQAYCYRSKLDGTEHIAIVKGSIGYGQDIL 1227
SITDLIRYRRKREKLVER +VSRLPTKWGLFQAYCY SKLDGTEH+A+VKG +G GQD+L
Sbjct: 301 SITDLIRYRRKREKLVERTSVSRLPTKWGLFQAYCYSSKLDGTEHVAVVKGDMGDGQDVL 360
Query: 1228 VRVHSECLTGDIFGSARCDCGNQLALAVQVVEQAGRGVVLYLRGHEGRGIGLGHKLMAYN 1407
VRVHSECLTGDIFGSARCDCGNQL LA++++E+AGRGVV+YLRGHEGRGIGLGHKL AYN
Sbjct: 361 VRVHSECLTGDIFGSARCDCGNQLDLAMRLIEEAGRGVVVYLRGHEGRGIGLGHKLKAYN 420
Query: 1408 LQDQGHDTVEANLELGFSADARDYGIGAQILRDIGVRTMRLMTNNPAKFTGLKGYGLAVV 1587
LQDQGHDTV+AN+ELG + DAR+YGIGAQILRDIGVRTMRLMTNNPAKF GLKGYGLAVV
Sbjct: 421 LQDQGHDTVQANIELGLAVDAREYGIGAQILRDIGVRTMRLMTNNPAKFVGLKGYGLAVV 480
Query: 1588 GRVPVISPITEENKRYLETKRTKMGHIYGSDI--SSAGFPDPIVNPKDRVE 1734
GRVPV++PITEENKRYLETKRTKMGHIYGSD+ S GF VN D +E
Sbjct: 481 GRVPVLTPITEENKRYLETKRTKMGHIYGSDLQGSLPGFNGSTVNNGDSLE 531
>ref|XP_003568299.1| PREDICTED: riboflavin biosynthesis protein ribBA, chloroplastic-like
[Brachypodium distachyon]
Length = 527
Score = 666 bits (1718), Expect = 0.0
Identities = 343/529 (64%), Positives = 411/529 (77%)
Frame = +1
Query: 139 MICLLLQRPLAPQIAINSCFHCSIASSQSLIIKLNRSNFLKYGCQAIXXXXXXXXXXXXX 318
M C+LL L+ +N+ H + ++ + R +L+ C AI
Sbjct: 1 MDCVLLSSHLSSHAVVNARIHQGSVNLNNIGFAVFRKGWLQLRCYAIGDAGSLNDPLK-- 58
Query: 319 XXXXSNQNGSILESLNESTKATFRTLNAEITQETIDFFVSDAKGDPDCPTEGFSSIEQAL 498
N+NG +L+ LN S ++F TL AEITQET DFFVSDA+GDPD PTEGFSSIE A+
Sbjct: 59 ----ENKNGPVLQGLNGSG-SSFTTLGAEITQETGDFFVSDAEGDPDKPTEGFSSIEDAI 113
Query: 499 NTLPQGKFVIAIDDEKEDVEGNLVMAASLIKPQTMSFMVKHGSGIVSVGMKEEDLERXXX 678
N+L +GKFVIA+DDE D EG+LV+AASL ++++FM+++GSGI+SVGM EEDLER
Sbjct: 114 NSLREGKFVIAVDDENGDNEGDLVIAASLASAESIAFMIRNGSGIISVGMHEEDLERLMI 173
Query: 679 XXXXXXXXXXXXXXXAYTVTVDAKVGVSTGVSASDRAKTVLALSSSHSKPEDFRRPGHVF 858
A TVTVDA+VG+STGVSA+DRAKT+LAL+S SKP D RRPGH+F
Sbjct: 174 PMMSPVTEIGDISAAASTVTVDARVGISTGVSAADRAKTILALASPDSKPSDLRRPGHIF 233
Query: 859 PLMYRNGGVLSRAGHTEASVDLVSLAGLPPISALSAIIDAEDGSIARLPFLRKMALEYGL 1038
PL YRNGGVL RAGHTEASVDLV+LAGL P+S LS IID +DGS+A P L++MA E+ +
Sbjct: 234 PLKYRNGGVLKRAGHTEASVDLVALAGLRPVSVLSTIIDPKDGSMAGTPALKQMASEHDI 293
Query: 1039 LIVSITDLIRYRRKREKLVERIAVSRLPTKWGLFQAYCYRSKLDGTEHIAIVKGSIGYGQ 1218
IVSI DLIRYRRKREKLVE IAVSRLPTKWGLF+AYCY+SKLDGTEHIA+ KG IG G+
Sbjct: 294 PIVSIADLIRYRRKREKLVELIAVSRLPTKWGLFRAYCYQSKLDGTEHIAVAKGDIGDGE 353
Query: 1219 DILVRVHSECLTGDIFGSARCDCGNQLALAVQVVEQAGRGVVLYLRGHEGRGIGLGHKLM 1398
D+LVRVHSECLTGDI GSARCDCG QL LA++++E+AGRGV++YLRGHEGRGIGLG KL
Sbjct: 354 DVLVRVHSECLTGDILGSARCDCGEQLDLAMRLIEKAGRGVLVYLRGHEGRGIGLGQKLR 413
Query: 1399 AYNLQDQGHDTVEANLELGFSADARDYGIGAQILRDIGVRTMRLMTNNPAKFTGLKGYGL 1578
AYNLQDQG DTVEAN+ELG + D+R+YGIGAQILRDIGVRTMRLMTNNPAKF GLKGYGL
Sbjct: 414 AYNLQDQGSDTVEANVELGLAIDSREYGIGAQILRDIGVRTMRLMTNNPAKFVGLKGYGL 473
Query: 1579 AVVGRVPVISPITEENKRYLETKRTKMGHIYGSDISSAGFPDPIVNPKD 1725
AVVGRVPV+SPIT+EN++YLETKRTKMGH+YGSD+ G +NP+D
Sbjct: 474 AVVGRVPVMSPITKENQKYLETKRTKMGHVYGSDL-PGGLLKEFLNPED 521