BLASTX nr result

ID: Coptis23_contig00000666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000666
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526678.1| breast cancer type 2 susceptibility protein ...    56   3e-06

>ref|XP_002526678.1| breast cancer type 2 susceptibility protein brca2, putative
           [Ricinus communis] gi|223533978|gb|EEF35700.1| breast
           cancer type 2 susceptibility protein brca2, putative
           [Ricinus communis]
          Length = 1156

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = +2

Query: 104 MDAILDVPLSKQLVAGKLFVGQKLRIWRAVVC 199
           +DAILDVPLSKQL +GKLFVGQKLRIW A +C
Sbjct: 653 VDAILDVPLSKQLASGKLFVGQKLRIWGARLC 684


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