BLASTX nr result

ID: Coptis23_contig00000643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000643
         (1124 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277414.1| PREDICTED: uncharacterized protein LOC100252...   276   5e-72
emb|CBI40800.3| unnamed protein product [Vitis vinifera]              275   2e-71
ref|XP_003529426.1| PREDICTED: UPF0047 protein yjbQ-like [Glycin...   274   3e-71
ref|XP_003607891.1| hypothetical protein MTR_4g084120 [Medicago ...   273   4e-71
ref|XP_004145568.1| PREDICTED: UPF0047 protein C4A8.02c-like iso...   269   1e-69

>ref|XP_002277414.1| PREDICTED: uncharacterized protein LOC100252976 isoform 1 [Vitis
           vinifera]
          Length = 236

 Score =  276 bits (707), Expect = 5e-72
 Identities = 137/171 (80%), Positives = 146/171 (85%), Gaps = 5/171 (2%)
 Frame = +3

Query: 147 IRVKS-----QLNSTTDQKKRRGLMEGAPNKWAQKTISLSPQQRGCHLITPKILKEIEQD 311
           IRVKS       N  TD      +   AP KWAQKTI+L PQ+RGCH ITPKILKEI QD
Sbjct: 69  IRVKSLYTPTSFNDPTDSTSMAAIP--AP-KWAQKTITLPPQRRGCHHITPKILKEIGQD 125

Query: 312 LSGFKCGLAHFFLQHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDM 491
           LSGFKCGLAH F+QHTSASLTINENYDSDVRDDTETFL+KIVPEGRSAPWKHTLEGPDDM
Sbjct: 126 LSGFKCGLAHLFIQHTSASLTINENYDSDVRDDTETFLSKIVPEGRSAPWKHTLEGPDDM 185

Query: 492 PAHIKSSMFGCTLTVPITDGRLNMGTWQGIWLCEHRDYATPRKIVVTLNGV 644
           PAHIKSSMFGC+LT+PITDG+LNMGTWQGIWLCEHRD AT RK+VVTLNGV
Sbjct: 186 PAHIKSSMFGCSLTIPITDGQLNMGTWQGIWLCEHRDRATARKVVVTLNGV 236


>emb|CBI40800.3| unnamed protein product [Vitis vinifera]
          Length = 148

 Score =  275 bits (702), Expect = 2e-71
 Identities = 127/141 (90%), Positives = 135/141 (95%)
 Frame = +3

Query: 222 KWAQKTISLSPQQRGCHLITPKILKEIEQDLSGFKCGLAHFFLQHTSASLTINENYDSDV 401
           KWAQKTI+L PQ+RGCH ITPKILKEI QDLSGFKCGLAH F+QHTSASLTINENYDSDV
Sbjct: 8   KWAQKTITLPPQRRGCHHITPKILKEIGQDLSGFKCGLAHLFIQHTSASLTINENYDSDV 67

Query: 402 RDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTVPITDGRLNMGTWQGI 581
           RDDTETFL+KIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGC+LT+PITDG+LNMGTWQGI
Sbjct: 68  RDDTETFLSKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCSLTIPITDGQLNMGTWQGI 127

Query: 582 WLCEHRDYATPRKIVVTLNGV 644
           WLCEHRD AT RK+VVTLNGV
Sbjct: 128 WLCEHRDRATARKVVVTLNGV 148


>ref|XP_003529426.1| PREDICTED: UPF0047 protein yjbQ-like [Glycine max]
          Length = 175

 Score =  274 bits (701), Expect = 3e-71
 Identities = 128/167 (76%), Positives = 145/167 (86%)
 Frame = +3

Query: 144 PIRVKSQLNSTTDQKKRRGLMEGAPNKWAQKTISLSPQQRGCHLITPKILKEIEQDLSGF 323
           P  V++Q + T    KR  + E    KWAQKT+SL P +RGCHL+T KI+KEIEQDLSGF
Sbjct: 12  PFGVRAQQHPTV---KRDSMAECTVPKWAQKTVSLPPLRRGCHLVTSKIVKEIEQDLSGF 68

Query: 324 KCGLAHFFLQHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHI 503
           KCGLAH FLQHTSASLTINENYDSDVR+DTETFLN+IVPEG SAPWKHTLEGPDDMPAHI
Sbjct: 69  KCGLAHLFLQHTSASLTINENYDSDVREDTETFLNRIVPEGSSAPWKHTLEGPDDMPAHI 128

Query: 504 KSSMFGCTLTVPITDGRLNMGTWQGIWLCEHRDYATPRKIVVTLNGV 644
           KSSMFGCTLT+PIT+G+LNMGTWQGIWLCEHRD+ T R++VVTLNG+
Sbjct: 129 KSSMFGCTLTIPITNGKLNMGTWQGIWLCEHRDHPTSRRVVVTLNGI 175


>ref|XP_003607891.1| hypothetical protein MTR_4g084120 [Medicago truncatula]
           gi|85719357|gb|ABC75362.1| Protein of unknown function
           UPF0047 [Medicago truncatula]
           gi|355508946|gb|AES90088.1| hypothetical protein
           MTR_4g084120 [Medicago truncatula]
          Length = 173

 Score =  273 bits (699), Expect = 4e-71
 Identities = 130/167 (77%), Positives = 145/167 (86%)
 Frame = +3

Query: 144 PIRVKSQLNSTTDQKKRRGLMEGAPNKWAQKTISLSPQQRGCHLITPKILKEIEQDLSGF 323
           P+ VK+QL +   Q+     M  AP KWAQKTI+L P +RGCHL+TPKI KEIEQDLSGF
Sbjct: 12  PLSVKAQLPTLKTQES----MATAP-KWAQKTIALPPYKRGCHLVTPKIAKEIEQDLSGF 66

Query: 324 KCGLAHFFLQHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHI 503
           KCGLAH FLQHTSASLTINENYD+DVRDDTETFLN+IVPEG SAPWKHTLEG DDMPAHI
Sbjct: 67  KCGLAHLFLQHTSASLTINENYDTDVRDDTETFLNRIVPEGPSAPWKHTLEGHDDMPAHI 126

Query: 504 KSSMFGCTLTVPITDGRLNMGTWQGIWLCEHRDYATPRKIVVTLNGV 644
           KSSMFGC LT+PITDG+LNMGTWQGIWLCEHRD+ T R++VVTLNG+
Sbjct: 127 KSSMFGCALTIPITDGKLNMGTWQGIWLCEHRDHPTSRRVVVTLNGI 173


>ref|XP_004145568.1| PREDICTED: UPF0047 protein C4A8.02c-like isoform 1 [Cucumis
           sativus]
          Length = 185

 Score =  269 bits (687), Expect = 1e-69
 Identities = 130/181 (71%), Positives = 148/181 (81%), Gaps = 8/181 (4%)
 Frame = +3

Query: 126 LLTPPKPIRVK---SQLNSTTDQKKRRG-----LMEGAPNKWAQKTISLSPQQRGCHLIT 281
           ++   +P+RVK   S  +ST +     G      M  A  KWAQKT++LSP +RGCHLIT
Sbjct: 5   IILAAQPLRVKLLRSNNSSTGNPSATAGSSNPSFMAAAGPKWAQKTVTLSPHRRGCHLIT 64

Query: 282 PKILKEIEQDLSGFKCGLAHFFLQHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPW 461
           PKI+KEI QDLS FKCGLAH FLQHTSASLTINENYDSDV++DTETFLNKIVPEG SAPW
Sbjct: 65  PKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDSDVQNDTETFLNKIVPEGTSAPW 124

Query: 462 KHTLEGPDDMPAHIKSSMFGCTLTVPITDGRLNMGTWQGIWLCEHRDYATPRKIVVTLNG 641
           KHTLEGPDDMPAHIKSS+FGC LT+PIT+G+LNMGTWQGIWLCEHRD+ T R IVVTLNG
Sbjct: 125 KHTLEGPDDMPAHIKSSLFGCALTIPITNGKLNMGTWQGIWLCEHRDHPTARNIVVTLNG 184

Query: 642 V 644
           +
Sbjct: 185 I 185


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