BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000576
         (648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding pro...   253   e-101
gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding prot...   257   e-101
emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [S...   253   e-101
emb|CAX64458.1| major chlorophyll a/b binding protein LHCb1.4 pr...   253   e-100
ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, ...   252   e-100

>sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
           AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
           Precursor gi|14240|emb|CAA32526.1| chlorophyll a/b
           binding protein precursor [Spinacia oleracea]
           gi|193783447|emb|CAJ77389.3| major chlorophyll a/b
           binding protein LHCb1.3 [Spinacia oleracea]
          Length = 267

 Score =  253 bits (647), Expect(2) = e-101
 Identities = 123/127 (96%), Positives = 125/127 (98%)
 Frame = +2

Query: 266 KNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLV 445
           KNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLV
Sbjct: 95  KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 154

Query: 446 HAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 625
           HAQSILAIWA QVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK
Sbjct: 155 HAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 214

Query: 626 ELKNGRL 646
           E+KNGRL
Sbjct: 215 EIKNGRL 221



 Score =  142 bits (358), Expect(2) = e-101
 Identities = 66/70 (94%), Positives = 68/70 (97%), Gaps = 1/70 (1%)
 Frame = +3

Query: 3   LGEGRITMRKTGGKPKTV-SSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLS 179
           +GEGRITMRKT GKPKTV SSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLS
Sbjct: 28  IGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLS 87

Query: 180 ADPETFSKNR 209
           ADPETF+KNR
Sbjct: 88  ADPETFAKNR 97


>gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
           cathayensis]
          Length = 267

 Score =  257 bits (657), Expect(2) = e-101
 Identities = 125/127 (98%), Positives = 126/127 (99%)
 Frame = +2

Query: 266 KNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLV 445
           KNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLV
Sbjct: 95  KNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLV 154

Query: 446 HAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 625
           HAQSILAIWATQVILMGAVEGYRIAGGPLGEV DP+YPGGSFDPLGLADDPEAFAELKVK
Sbjct: 155 HAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVK 214

Query: 626 ELKNGRL 646
           ELKNGRL
Sbjct: 215 ELKNGRL 221



 Score =  137 bits (345), Expect(2) = e-101
 Identities = 63/70 (90%), Positives = 66/70 (94%), Gaps = 1/70 (1%)
 Frame = +3

Query: 3   LGEGRITMRKTGGKPKTVSS-SPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLS 179
           LGEGR+TMRKT G+PK VSS SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLS
Sbjct: 28  LGEGRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 87

Query: 180 ADPETFSKNR 209
           ADPETF+KNR
Sbjct: 88  ADPETFAKNR 97


>emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [Spinacia oleracea]
          Length = 267

 Score =  253 bits (647), Expect(2) = e-101
 Identities = 123/127 (96%), Positives = 125/127 (98%)
 Frame = +2

Query: 266 KNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLV 445
           KNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLV
Sbjct: 95  KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 154

Query: 446 HAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 625
           HAQSILAIWA QVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK
Sbjct: 155 HAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 214

Query: 626 ELKNGRL 646
           E+KNGRL
Sbjct: 215 EIKNGRL 221



 Score =  140 bits (354), Expect(2) = e-101
 Identities = 65/70 (92%), Positives = 67/70 (95%), Gaps = 1/70 (1%)
 Frame = +3

Query: 3   LGEGRITMRKTGGKPKTVSS-SPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLS 179
           LGEGR+TMRKT GKPK VSS SPWYGPDRVKYLGPFSGE+PSYLTGEFPGDYGWDTAGLS
Sbjct: 28  LGEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLS 87

Query: 180 ADPETFSKNR 209
           ADPETFSKNR
Sbjct: 88  ADPETFSKNR 97


>emb|CAX64458.1| major chlorophyll a/b binding protein LHCb1.4 precursor [Spinacia
           oleracea]
          Length = 267

 Score =  253 bits (647), Expect(2) = e-100
 Identities = 123/127 (96%), Positives = 125/127 (98%)
 Frame = +2

Query: 266 KNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLV 445
           KNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLV
Sbjct: 95  KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 154

Query: 446 HAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 625
           HAQSILAIWA QVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK
Sbjct: 155 HAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 214

Query: 626 ELKNGRL 646
           E+KNGRL
Sbjct: 215 EIKNGRL 221



 Score =  138 bits (348), Expect(2) = e-100
 Identities = 64/70 (91%), Positives = 66/70 (94%), Gaps = 1/70 (1%)
 Frame = +3

Query: 3   LGEGRITMRKTGGKPKTVSS-SPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLS 179
           L EGR+TMRKT GKPK VSS SPWYGPDRVKYLGPFSGE+PSYLTGEFPGDYGWDTAGLS
Sbjct: 28  LSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLS 87

Query: 180 ADPETFSKNR 209
           ADPETFSKNR
Sbjct: 88  ADPETFSKNR 97


>ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
           [Cucumis sativus] gi|449525484|ref|XP_004169747.1|
           PREDICTED: chlorophyll a-b binding protein,
           chloroplastic-like [Cucumis sativus]
          Length = 267

 Score =  252 bits (643), Expect(2) = e-100
 Identities = 120/127 (94%), Positives = 125/127 (98%)
 Frame = +2

Query: 266 KNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLV 445
           KNRELEVIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLV
Sbjct: 95  KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 154

Query: 446 HAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 625
           HAQSILAIWA QV+LMGAVEGYRIAGGPLGE+ DP+YPGGSFDPLGLADDPEAFAELKVK
Sbjct: 155 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVK 214

Query: 626 ELKNGRL 646
           ELKNGRL
Sbjct: 215 ELKNGRL 221



 Score =  139 bits (349), Expect(2) = e-100
 Identities = 65/70 (92%), Positives = 66/70 (94%), Gaps = 1/70 (1%)
 Frame = +3

Query: 3   LGEGRITMRKTGGKPKTVSS-SPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLS 179
           LGEGRITMRKT GKPK VSS SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLS
Sbjct: 28  LGEGRITMRKTAGKPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 87

Query: 180 ADPETFSKNR 209
           ADPETF+KNR
Sbjct: 88  ADPETFAKNR 97