BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000572
         (1405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [S...   483   e-134
gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding prot...   482   e-134
sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding pro...   482   e-133
ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, ...   481   e-133
emb|CAX64458.1| major chlorophyll a/b binding protein LHCb1.4 pr...   481   e-133

>emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [Spinacia oleracea]
          Length = 267

 Score =  483 bits (1243), Expect = e-134
 Identities = 231/253 (91%), Positives = 243/253 (96%), Gaps = 6/253 (2%)
 Frame = +2

Query: 551  GKAVKIGPSASELLGEGRITMRKTVGKP------TQWYGPDRVKYLGPFSGESPSYLTGE 712
            GKA+K+GP+ASE+LGEGR+TMRKT GKP      + WYGPDRVKYLGPFSGE+PSYLTGE
Sbjct: 15   GKAIKLGPTASEILGEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74

Query: 713  FPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 892
            FPGDYGWDTAGLSADPETFSKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFK
Sbjct: 75   FPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134

Query: 893  AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGG 1072
            AG+QIFSEGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRIAGGPLGEVVDPLYPGG
Sbjct: 135  AGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGG 194

Query: 1073 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 1252
            SFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN
Sbjct: 195  SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 254

Query: 1253 NAWAYATNFVPGK 1291
            NAW++ATNFVPGK
Sbjct: 255  NAWSFATNFVPGK 267


>gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
            cathayensis]
          Length = 267

 Score =  482 bits (1241), Expect = e-134
 Identities = 231/253 (91%), Positives = 242/253 (95%), Gaps = 6/253 (2%)
 Frame = +2

Query: 551  GKAVKIGPSASELLGEGRITMRKTVGKP------TQWYGPDRVKYLGPFSGESPSYLTGE 712
            G+A+K+ PS+S+LLGEGR+TMRKT G+P      + WYGPDRVKYLGPFSGE PSYLTGE
Sbjct: 15   GQAIKLAPSSSDLLGEGRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 74

Query: 713  FPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 892
            FPGDYGWDTAGLSADPETF+KNRELEVIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFK
Sbjct: 75   FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFK 134

Query: 893  AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGG 1072
            AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEV DP+YPGG
Sbjct: 135  AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGG 194

Query: 1073 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 1252
            SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN
Sbjct: 195  SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 254

Query: 1253 NAWAYATNFVPGK 1291
            NAWAYATNFVPGK
Sbjct: 255  NAWAYATNFVPGK 267


>sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
            AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
            Precursor gi|14240|emb|CAA32526.1| chlorophyll a/b
            binding protein precursor [Spinacia oleracea]
            gi|193783447|emb|CAJ77389.3| major chlorophyll a/b
            binding protein LHCb1.3 [Spinacia oleracea]
          Length = 267

 Score =  482 bits (1240), Expect = e-133
 Identities = 232/253 (91%), Positives = 242/253 (95%), Gaps = 6/253 (2%)
 Frame = +2

Query: 551  GKAVKIGPSASELLGEGRITMRKTVGKP------TQWYGPDRVKYLGPFSGESPSYLTGE 712
            GKAVK+GP+ASE++GEGRITMRKT GKP      + WYGPDRVKYLGPFSGESPSYLTGE
Sbjct: 15   GKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGE 74

Query: 713  FPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 892
            FPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFK
Sbjct: 75   FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134

Query: 893  AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGG 1072
            AG+QIFSEGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRIAGGPLGEVVDPLYPGG
Sbjct: 135  AGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGG 194

Query: 1073 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 1252
            SFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN
Sbjct: 195  SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 254

Query: 1253 NAWAYATNFVPGK 1291
            NAW +ATNFVPGK
Sbjct: 255  NAWNFATNFVPGK 267


>ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
            [Cucumis sativus] gi|449525484|ref|XP_004169747.1|
            PREDICTED: chlorophyll a-b binding protein,
            chloroplastic-like [Cucumis sativus]
          Length = 267

 Score =  481 bits (1238), Expect = e-133
 Identities = 231/253 (91%), Positives = 241/253 (95%), Gaps = 6/253 (2%)
 Frame = +2

Query: 551  GKAVKIGPSASELLGEGRITMRKTVGKP------TQWYGPDRVKYLGPFSGESPSYLTGE 712
            G+AVK+ P+AS+LLGEGRITMRKT GKP      + WYGPDRVKYLGPFSGE PSYLTGE
Sbjct: 15   GQAVKLSPTASDLLGEGRITMRKTAGKPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 74

Query: 713  FPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 892
            FPGDYGWDTAGLSADPETF+KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK
Sbjct: 75   FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 134

Query: 893  AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGG 1072
            AG+QIFSEGGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYRIAGGPLGE+ DP+YPGG
Sbjct: 135  AGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGG 194

Query: 1073 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 1252
            SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN
Sbjct: 195  SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 254

Query: 1253 NAWAYATNFVPGK 1291
            NAWAYATNFVPGK
Sbjct: 255  NAWAYATNFVPGK 267


>emb|CAX64458.1| major chlorophyll a/b binding protein LHCb1.4 precursor [Spinacia
            oleracea]
          Length = 267

 Score =  481 bits (1237), Expect = e-133
 Identities = 230/253 (90%), Positives = 242/253 (95%), Gaps = 6/253 (2%)
 Frame = +2

Query: 551  GKAVKIGPSASELLGEGRITMRKTVGKP------TQWYGPDRVKYLGPFSGESPSYLTGE 712
            GKA+K+GP+ASE+L EGR+TMRKT GKP      + WYGPDRVKYLGPFSGE+PSYLTGE
Sbjct: 15   GKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74

Query: 713  FPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 892
            FPGDYGWDTAGLSADPETFSKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFK
Sbjct: 75   FPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134

Query: 893  AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGG 1072
            AG+QIFSEGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRIAGGPLGEVVDPLYPGG
Sbjct: 135  AGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGG 194

Query: 1073 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 1252
            SFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN
Sbjct: 195  SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 254

Query: 1253 NAWAYATNFVPGK 1291
            NAW++ATNFVPGK
Sbjct: 255  NAWSFATNFVPGK 267