BLASTX nr result

ID: Coptis23_contig00000570 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000570
         (1543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324510.1| predicted protein [Populus trichocarpa] gi|2...   513   0.0  
ref|XP_002528222.1| UDP-glucuronate 5-epimerase, putative [Ricin...   509   0.0  
gb|ACJ11754.1| UDP-D-glucuronic acid 4-epimerase [Gossypium hirs...   518   0.0  
ref|XP_003549520.1| PREDICTED: UDP-glucuronate 4-epimerase 1-lik...   509   0.0  
ref|XP_004162690.1| PREDICTED: UDP-glucuronate 4-epimerase 1-lik...   513   0.0  

>ref|XP_002324510.1| predicted protein [Populus trichocarpa] gi|222865944|gb|EEF03075.1|
            predicted protein [Populus trichocarpa]
          Length = 431

 Score =  513 bits (1321), Expect(2) = 0.0
 Identities = 251/283 (88%), Positives = 267/283 (94%)
 Frame = -2

Query: 1374 MRSLEDELFPSTPGKVKIERTNMLNRQFYRCFASTSTMFLWALFLIALTASYLSFQSFVD 1195
            M SLE+ELFPSTPGK KI+R + +NRQF RCFASTSTMFLWALFLIALTASYLSFQSFVD
Sbjct: 1    MPSLEEELFPSTPGKFKIDRAHNMNRQFNRCFASTSTMFLWALFLIALTASYLSFQSFVD 60

Query: 1194 SGSKYLTASWGGIQWEKQVRNSAIIQRQHGFSVLVTGSAGFVGTHVSLALKKRGDGVVGL 1015
            SGS+Y TASWGGIQWEKQ+RNSA I R  G SVLVTG+AGFVG+HVSLALKKRGDGVVG+
Sbjct: 61   SGSRYFTASWGGIQWEKQIRNSAQIHRSKGMSVLVTGAAGFVGSHVSLALKKRGDGVVGI 120

Query: 1014 DNFNNYYDPSLKKARKALLNNHGVFIVEGDLNDARLLSKLFDIVAFTHVMHLAAQAGVRY 835
            DNFNNYYDPSLKKARK+LLNN G+FIVEGD+NDARL++KLFDIVAFTHVMHLAAQAGVRY
Sbjct: 121  DNFNNYYDPSLKKARKSLLNNQGIFIVEGDINDARLIAKLFDIVAFTHVMHLAAQAGVRY 180

Query: 834  AMENPGSYVHSNIAGLVTLLEACKSANPQPSVVWASSSSVYGLNEKQPFSELDRTDQPAS 655
            AMENP SYVHSNIAGLVTLLEACK ANPQPSVVWASSSSVYGLNEK PFSE DRTDQPAS
Sbjct: 181  AMENPHSYVHSNIAGLVTLLEACKLANPQPSVVWASSSSVYGLNEKVPFSESDRTDQPAS 240

Query: 654  LYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAY 526
            LYAATKKAGEEITHTYNHIYGLS+TGLRFFTVYGP+GRPDMAY
Sbjct: 241  LYAATKKAGEEITHTYNHIYGLSVTGLRFFTVYGPFGRPDMAY 283



 Score =  267 bits (682), Expect(2) = 0.0
 Identities = 130/154 (84%), Positives = 137/154 (88%), Gaps = 1/154 (0%)
 Frame = -1

Query: 478 RPDMAYFSFTRNILQGKPITVYRGKNRVDLARDFTYIDDIVKGCLGSLDXXXXXXXXXXX 299
           RPDMAYFSFTRNILQGKPITVYRGKNRVDLARDFTYIDDIVKGC+GSLD           
Sbjct: 278 RPDMAYFSFTRNILQGKPITVYRGKNRVDLARDFTYIDDIVKGCVGSLDTSGKSTGSGGK 337

Query: 298 KRGPAPYRIFNLGNTSPVTVPTLVSILERHLKVKAKKNFIDMPGNGDVPFTHANISLASK 119
           KRGPAPYRIFNLGNTSPVTVPTLV+ILERHLKVKAK+N +DMPGNGDVPFTHANISLA +
Sbjct: 338 KRGPAPYRIFNLGNTSPVTVPTLVNILERHLKVKAKRNIVDMPGNGDVPFTHANISLAQR 397

Query: 118 EFGYKPTTDLQTGLKKFVKWYLNYYGYN-GKTVN 20
           E GYKPTTDL+TGLKKFVKWYL YYGYN GK V+
Sbjct: 398 ELGYKPTTDLETGLKKFVKWYLTYYGYNRGKAVH 431


>ref|XP_002528222.1| UDP-glucuronate 5-epimerase, putative [Ricinus communis]
            gi|223532383|gb|EEF34179.1| UDP-glucuronate 5-epimerase,
            putative [Ricinus communis]
          Length = 433

 Score =  509 bits (1312), Expect(2) = 0.0
 Identities = 252/285 (88%), Positives = 269/285 (94%), Gaps = 2/285 (0%)
 Frame = -2

Query: 1374 MRSLEDELFPSTPGKVKIERT-NMLNRQFYRCFASTSTMFLWALFLIALTASYLSFQSFV 1198
            M SLE+ELFPSTPGK KI+R  + +NRQFYRCF STSTMFLWALFLIALTASYLSFQSF+
Sbjct: 1    MPSLEEELFPSTPGKFKIDRGGHTMNRQFYRCFTSTSTMFLWALFLIALTASYLSFQSFI 60

Query: 1197 DSGSKYLTASWGGIQWEKQVRNSAIIQRQHG-FSVLVTGSAGFVGTHVSLALKKRGDGVV 1021
            DSGSKY +ASWGG+QWEKQVRNSA I R  G  SVLVTG+AGFVGTHVSLALKKRGDGVV
Sbjct: 61   DSGSKYFSASWGGLQWEKQVRNSAQIHRPSGGVSVLVTGAAGFVGTHVSLALKKRGDGVV 120

Query: 1020 GLDNFNNYYDPSLKKARKALLNNHGVFIVEGDLNDARLLSKLFDIVAFTHVMHLAAQAGV 841
            GLDNFNNYYDPSLKKARK+LLN+HGVFIVEGD+NDARLL+KLFD+VAF+HVMHLAAQAGV
Sbjct: 121  GLDNFNNYYDPSLKKARKSLLNSHGVFIVEGDVNDARLLAKLFDVVAFSHVMHLAAQAGV 180

Query: 840  RYAMENPGSYVHSNIAGLVTLLEACKSANPQPSVVWASSSSVYGLNEKQPFSELDRTDQP 661
            RYAMENP SYVHSNIAGLVTLLEACKSANPQP++VWASSSSVYGLN+K PFSE DRTDQP
Sbjct: 181  RYAMENPHSYVHSNIAGLVTLLEACKSANPQPAIVWASSSSVYGLNDKVPFSESDRTDQP 240

Query: 660  ASLYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAY 526
            ASLYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAY
Sbjct: 241  ASLYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAY 285



 Score =  267 bits (683), Expect(2) = 0.0
 Identities = 130/154 (84%), Positives = 138/154 (89%), Gaps = 1/154 (0%)
 Frame = -1

Query: 478 RPDMAYFSFTRNILQGKPITVYRGKNRVDLARDFTYIDDIVKGCLGSLDXXXXXXXXXXX 299
           RPDMAYFSFTRNILQGKPITVYRGKNRVDLARDFTYIDDIVKGC+GSLD           
Sbjct: 280 RPDMAYFSFTRNILQGKPITVYRGKNRVDLARDFTYIDDIVKGCVGSLDTAGKSTGSGGK 339

Query: 298 KRGPAPYRIFNLGNTSPVTVPTLVSILERHLKVKAKKNFIDMPGNGDVPFTHANISLASK 119
           KRGPAPYRIFNLGNTSPVTVPTLVSILE+HLK+KAK+N +DMPGNGDVPFTHANISLA +
Sbjct: 340 KRGPAPYRIFNLGNTSPVTVPTLVSILEKHLKMKAKRNVVDMPGNGDVPFTHANISLARR 399

Query: 118 EFGYKPTTDLQTGLKKFVKWYLNYYGYN-GKTVN 20
           E GYKPTTDLQTGLKKFV+WYL+YYGYN GK VN
Sbjct: 400 ELGYKPTTDLQTGLKKFVRWYLSYYGYNHGKAVN 433


>gb|ACJ11754.1| UDP-D-glucuronic acid 4-epimerase [Gossypium hirsutum]
          Length = 431

 Score =  518 bits (1333), Expect(2) = 0.0
 Identities = 251/283 (88%), Positives = 267/283 (94%)
 Frame = -2

Query: 1374 MRSLEDELFPSTPGKVKIERTNMLNRQFYRCFASTSTMFLWALFLIALTASYLSFQSFVD 1195
            M SLEDELFPSTPGK K++R + +NRQF+RCFASTSTMFLWALFLIALTASYL FQSFVD
Sbjct: 1    MPSLEDELFPSTPGKFKVDRAHNMNRQFHRCFASTSTMFLWALFLIALTASYLRFQSFVD 60

Query: 1194 SGSKYLTASWGGIQWEKQVRNSAIIQRQHGFSVLVTGSAGFVGTHVSLALKKRGDGVVGL 1015
            SGS+Y +ASWGGIQWEKQVRNSA I R  G SVLVTG+AGFVGTHVSLALKKRGDGVVGL
Sbjct: 61   SGSRYFSASWGGIQWEKQVRNSAQIHRSGGMSVLVTGAAGFVGTHVSLALKKRGDGVVGL 120

Query: 1014 DNFNNYYDPSLKKARKALLNNHGVFIVEGDLNDARLLSKLFDIVAFTHVMHLAAQAGVRY 835
            DNFNNYYDPSLKKARK+LLN+HG+ +VEGDLNDA+LL+KLFD+VAFTHVMHLAAQAGVRY
Sbjct: 121  DNFNNYYDPSLKKARKSLLNSHGILVVEGDLNDAKLLAKLFDVVAFTHVMHLAAQAGVRY 180

Query: 834  AMENPGSYVHSNIAGLVTLLEACKSANPQPSVVWASSSSVYGLNEKQPFSELDRTDQPAS 655
            AMENP SYVHSNIAGLVTLLE CKSANPQP+VVWASSSSVYGLNEK PFSE DRTDQPAS
Sbjct: 181  AMENPNSYVHSNIAGLVTLLEICKSANPQPAVVWASSSSVYGLNEKVPFSEADRTDQPAS 240

Query: 654  LYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAY 526
            LYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAY
Sbjct: 241  LYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAY 283



 Score =  259 bits (661), Expect(2) = 0.0
 Identities = 123/150 (82%), Positives = 133/150 (88%)
 Frame = -1

Query: 478 RPDMAYFSFTRNILQGKPITVYRGKNRVDLARDFTYIDDIVKGCLGSLDXXXXXXXXXXX 299
           RPDMAYFSFTRNILQGKPIT+YRGKNRVDLARDFTYIDDIVKGCLGSLD           
Sbjct: 278 RPDMAYFSFTRNILQGKPITIYRGKNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSGGK 337

Query: 298 KRGPAPYRIFNLGNTSPVTVPTLVSILERHLKVKAKKNFIDMPGNGDVPFTHANISLASK 119
           K+G APYRIFNLGNTSPV VP LV+ILERHLKVKAK+N +DMPGNGDVPFTHANISLA +
Sbjct: 338 KKGNAPYRIFNLGNTSPVKVPELVNILERHLKVKAKRNIVDMPGNGDVPFTHANISLAQR 397

Query: 118 EFGYKPTTDLQTGLKKFVKWYLNYYGYNGK 29
           EFGYKP+TDLQTGLKKFV+WYL+YYGYN +
Sbjct: 398 EFGYKPSTDLQTGLKKFVRWYLSYYGYNNR 427


>ref|XP_003549520.1| PREDICTED: UDP-glucuronate 4-epimerase 1-like [Glycine max]
          Length = 431

 Score =  509 bits (1312), Expect(2) = 0.0
 Identities = 249/283 (87%), Positives = 267/283 (94%)
 Frame = -2

Query: 1374 MRSLEDELFPSTPGKVKIERTNMLNRQFYRCFASTSTMFLWALFLIALTASYLSFQSFVD 1195
            M SLE+ELFPSTPGK KIER++ +NRQ YRCFASTSTMFLWALFLIALTASYLSFQ FVD
Sbjct: 1    MPSLEEELFPSTPGKFKIERSHHMNRQLYRCFASTSTMFLWALFLIALTASYLSFQGFVD 60

Query: 1194 SGSKYLTASWGGIQWEKQVRNSAIIQRQHGFSVLVTGSAGFVGTHVSLALKKRGDGVVGL 1015
            SGS+YLTASWGGIQWEKQVR SA I RQ G SVLVTG+AGFVG+HVSLALK+RGDGVVGL
Sbjct: 61   SGSRYLTASWGGIQWEKQVRTSAQIHRQGGMSVLVTGAAGFVGSHVSLALKRRGDGVVGL 120

Query: 1014 DNFNNYYDPSLKKARKALLNNHGVFIVEGDLNDARLLSKLFDIVAFTHVMHLAAQAGVRY 835
            DNFN+YYDPSLKKARK+LL  H VFIVEGD+NDA+LL+KLFD+VAFTHVMHLAAQAGVRY
Sbjct: 121  DNFNDYYDPSLKKARKSLLATHDVFIVEGDVNDAKLLAKLFDVVAFTHVMHLAAQAGVRY 180

Query: 834  AMENPGSYVHSNIAGLVTLLEACKSANPQPSVVWASSSSVYGLNEKQPFSELDRTDQPAS 655
            AMENP SYVHSNIAGLVTLLEACK+ANPQP++VWASSSSVYGLNEK PFSE D+TDQPAS
Sbjct: 181  AMENPHSYVHSNIAGLVTLLEACKTANPQPAIVWASSSSVYGLNEKVPFSESDQTDQPAS 240

Query: 654  LYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAY 526
            LYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAY
Sbjct: 241  LYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAY 283



 Score =  266 bits (681), Expect(2) = 0.0
 Identities = 131/154 (85%), Positives = 136/154 (88%), Gaps = 1/154 (0%)
 Frame = -1

Query: 478 RPDMAYFSFTRNILQGKPITVYRGKNRVDLARDFTYIDDIVKGCLGSLDXXXXXXXXXXX 299
           RPDMAYFSFTRNILQGKPITVYRGKN VDLARDFTYIDDIVKGC+GSLD           
Sbjct: 278 RPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCVGSLDTSAKSTGSGGK 337

Query: 298 KRGPAPYRIFNLGNTSPVTVPTLVSILERHLKVKAKKNFIDMPGNGDVPFTHANISLASK 119
           KRGPAPYRIFNLGNTSPVTVPTLVSILERHLKVKAK+N +DMPGNGDVPFTHANIS A +
Sbjct: 338 KRGPAPYRIFNLGNTSPVTVPTLVSILERHLKVKAKRNIVDMPGNGDVPFTHANISSARR 397

Query: 118 EFGYKPTTDLQTGLKKFVKWYLNYYGYN-GKTVN 20
           E GYKPTTDLQTGLKKFVKWYL+YYGYN GK VN
Sbjct: 398 ELGYKPTTDLQTGLKKFVKWYLSYYGYNHGKPVN 431


>ref|XP_004162690.1| PREDICTED: UDP-glucuronate 4-epimerase 1-like [Cucumis sativus]
          Length = 431

 Score =  513 bits (1322), Expect(2) = 0.0
 Identities = 250/283 (88%), Positives = 267/283 (94%)
 Frame = -2

Query: 1374 MRSLEDELFPSTPGKVKIERTNMLNRQFYRCFASTSTMFLWALFLIALTASYLSFQSFVD 1195
            M SLEDELFPSTPGK KI+R + +NRQF+RCFASTSTMFLWALFLIALTASYLSFQSFVD
Sbjct: 1    MPSLEDELFPSTPGKFKIDRNHPMNRQFHRCFASTSTMFLWALFLIALTASYLSFQSFVD 60

Query: 1194 SGSKYLTASWGGIQWEKQVRNSAIIQRQHGFSVLVTGSAGFVGTHVSLALKKRGDGVVGL 1015
            SGS+Y +ASWGGIQWEKQVR SA   R +GFSVLVTG+AGFVG+HVSLALKKRGDGVVGL
Sbjct: 61   SGSRYFSASWGGIQWEKQVRISAQPHRTNGFSVLVTGAAGFVGSHVSLALKKRGDGVVGL 120

Query: 1014 DNFNNYYDPSLKKARKALLNNHGVFIVEGDLNDARLLSKLFDIVAFTHVMHLAAQAGVRY 835
            DNFN+YYDPSLKKARK+LL+NHG+FIV+GD+ND RLL KLFD+V FTHVMHLAAQAGVRY
Sbjct: 121  DNFNSYYDPSLKKARKSLLSNHGIFIVDGDINDVRLLDKLFDVVVFTHVMHLAAQAGVRY 180

Query: 834  AMENPGSYVHSNIAGLVTLLEACKSANPQPSVVWASSSSVYGLNEKQPFSELDRTDQPAS 655
            AMENP SYVHSNIAGLVTLLEACKSANPQP+VVWASSSSVYGLNEK PFSE DRTDQPAS
Sbjct: 181  AMENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVYGLNEKVPFSESDRTDQPAS 240

Query: 654  LYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAY 526
            LYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAY
Sbjct: 241  LYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAY 283



 Score =  261 bits (666), Expect(2) = 0.0
 Identities = 129/154 (83%), Positives = 135/154 (87%), Gaps = 1/154 (0%)
 Frame = -1

Query: 478 RPDMAYFSFTRNILQGKPITVYRGKNRVDLARDFTYIDDIVKGCLGSLDXXXXXXXXXXX 299
           RPDMAYFSFTRNILQGKPITV+RGKNRVDLARDFTYIDDIVKGCLGSLD           
Sbjct: 278 RPDMAYFSFTRNILQGKPITVFRGKNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSGGK 337

Query: 298 KRGPAPYRIFNLGNTSPVTVPTLVSILERHLKVKAKKNFIDMPGNGDVPFTHANISLASK 119
           K G APYRIFNLGNTSPVTVPTLVSILERHLKVKAKKN ++MPGNGDVPFTHANIS A +
Sbjct: 338 KTGAAPYRIFNLGNTSPVTVPTLVSILERHLKVKAKKNVVEMPGNGDVPFTHANISSARR 397

Query: 118 EFGYKPTTDLQTGLKKFVKWYLNYYGYN-GKTVN 20
           E GYKPTTDLQTGLKKFV+WYL+YYGYN GK VN
Sbjct: 398 ELGYKPTTDLQTGLKKFVRWYLSYYGYNHGKPVN 431


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