BLASTX nr result

ID: Coptis23_contig00000539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000539
         (904 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002871536.1| hypothetical protein ARALYDRAFT_909245 [Arab...   350   3e-94
emb|CBI16413.3| unnamed protein product [Vitis vinifera]              350   3e-94
ref|XP_002285548.1| PREDICTED: uncharacterized protein LOC100246...   350   3e-94
ref|NP_196800.2| uncharacterized protein [Arabidopsis thaliana] ...   343   4e-92
emb|CAB88260.1| putative protein [Arabidopsis thaliana]               343   4e-92

>ref|XP_002871536.1| hypothetical protein ARALYDRAFT_909245 [Arabidopsis lyrata subsp.
           lyrata] gi|297317373|gb|EFH47795.1| hypothetical protein
           ARALYDRAFT_909245 [Arabidopsis lyrata subsp. lyrata]
          Length = 862

 Score =  350 bits (898), Expect = 3e-94
 Identities = 179/293 (61%), Positives = 207/293 (70%), Gaps = 1/293 (0%)
 Frame = +2

Query: 29  MNSFICFTLISLFLNGFYVHILGKECTNIPTVLSSKTLRSELLSSYNDSWREAMFAQYPH 208
           M S +  T++ L    F +  + KECTN PT LSS T RSELL S N++ +  +F+ Y H
Sbjct: 1   MKSGLIITIVLLLYTSFVLVCVAKECTNTPTQLSSHTFRSELLQSKNETLKTELFSHY-H 59

Query: 209 LTHTDDEAWSDLFPRRILKKE-EELDWNKLYKLIKYSNGNTGNEKFKGNFLNEVSLHDVR 385
           LT TDD AWS L PR++LK+E +E  W  LY+  K SN +       GNFL EVSLHDVR
Sbjct: 60  LTPTDDAAWSTLLPRKMLKEEADEFAWTMLYRTFKDSNSS-------GNFLKEVSLHDVR 112

Query: 386 LDPNSMYGIGQQTNLEYXXXXXXXXXXXXFRKNARLETLGQPYGGWESPAGELRGHFVGH 565
           LDPNS +G  QQTNLEY            FRK A L+  G  YGGWE P  ELRGHFVGH
Sbjct: 113 LDPNSFHGRAQQTNLEYLLMLDVDGLAWSFRKEAGLDAPGDHYGGWEKPDSELRGHFVGH 172

Query: 566 YLSATALMWASTHNGTLQAKMNALISALDECQQYIGSGYLSAFPSELFDRFEAIQPVWAP 745
           YLSATA MWASTHN TL+ KM+AL+SAL ECQQ  G+GYLSAFPS  FDRFEAI PVWAP
Sbjct: 173 YLSATAYMWASTHNDTLKEKMSALVSALSECQQKSGTGYLSAFPSSFFDRFEAITPVWAP 232

Query: 746 YYTIHKIMAGLVDQYLFAGNSQALKMVVWMADYFGNRVQNVISKYSIEQHWKS 904
           YYTIHKI+AGLVDQY  AGNSQAL+M   MADYF  RV+NVI KYS+E+HW+S
Sbjct: 233 YYTIHKIIAGLVDQYKLAGNSQALQMATGMADYFYGRVRNVIRKYSVERHWQS 285


>emb|CBI16413.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  350 bits (897), Expect = 3e-94
 Identities = 167/272 (61%), Positives = 208/272 (76%)
 Frame = +2

Query: 89  ILGKECTNIPTVLSSKTLRSELLSSYNDSWREAMFAQYPHLTHTDDEAWSDLFPRRILKK 268
           +LGKECTN+PT LSS + R ELL+S N+SW+  MF  Y HL HTDD AWS+L PR++L++
Sbjct: 22  VLGKECTNVPTQLSSHSFRYELLASNNESWKAEMFQHY-HLIHTDDSAWSNLLPRKLLRE 80

Query: 269 EEELDWNKLYKLIKYSNGNTGNEKFKGNFLNEVSLHDVRLDPNSMYGIGQQTNLEYXXXX 448
           E+E  W  +Y+ +K  +G+  N      FL E+SLHDVRLD +S++G  QQTNL+Y    
Sbjct: 81  EDEFSWAMMYRNMKNYDGSNSN------FLKEMSLHDVRLDSDSLHGRAQQTNLDYLLIL 134

Query: 449 XXXXXXXXFRKNARLETLGQPYGGWESPAGELRGHFVGHYLSATALMWASTHNGTLQAKM 628
                   FRK A L T G PYGGWE+P  ELRGHFVGHY+SA+A MWASTHN TL+ KM
Sbjct: 135 DVDRLVWSFRKTAGLSTPGLPYGGWEAPNVELRGHFVGHYMSASAQMWASTHNDTLKEKM 194

Query: 629 NALISALDECQQYIGSGYLSAFPSELFDRFEAIQPVWAPYYTIHKIMAGLVDQYLFAGNS 808
           +A++SAL  CQ+ +G+GYLSAFPSELFDRFEAI+PVWAPYYTIHKI+AGL+DQY FAGNS
Sbjct: 195 SAVVSALATCQEKMGTGYLSAFPSELFDRFEAIKPVWAPYYTIHKILAGLLDQYTFAGNS 254

Query: 809 QALKMVVWMADYFGNRVQNVISKYSIEQHWKS 904
           QALKM+ WM ++F  RVQNVI+ YS+E+HW S
Sbjct: 255 QALKMMTWMVEHFYKRVQNVITMYSLERHWLS 286


>ref|XP_002285548.1| PREDICTED: uncharacterized protein LOC100246702 [Vitis vinifera]
          Length = 864

 Score =  350 bits (897), Expect = 3e-94
 Identities = 167/272 (61%), Positives = 208/272 (76%)
 Frame = +2

Query: 89  ILGKECTNIPTVLSSKTLRSELLSSYNDSWREAMFAQYPHLTHTDDEAWSDLFPRRILKK 268
           +LGKECTN+PT LSS + R ELL+S N+SW+  MF  Y HL HTDD AWS+L PR++L++
Sbjct: 22  VLGKECTNVPTQLSSHSFRYELLASNNESWKAEMFQHY-HLIHTDDSAWSNLLPRKLLRE 80

Query: 269 EEELDWNKLYKLIKYSNGNTGNEKFKGNFLNEVSLHDVRLDPNSMYGIGQQTNLEYXXXX 448
           E+E  W  +Y+ +K  +G+  N      FL E+SLHDVRLD +S++G  QQTNL+Y    
Sbjct: 81  EDEFSWAMMYRNMKNYDGSNSN------FLKEMSLHDVRLDSDSLHGRAQQTNLDYLLIL 134

Query: 449 XXXXXXXXFRKNARLETLGQPYGGWESPAGELRGHFVGHYLSATALMWASTHNGTLQAKM 628
                   FRK A L T G PYGGWE+P  ELRGHFVGHY+SA+A MWASTHN TL+ KM
Sbjct: 135 DVDRLVWSFRKTAGLSTPGLPYGGWEAPNVELRGHFVGHYMSASAQMWASTHNDTLKEKM 194

Query: 629 NALISALDECQQYIGSGYLSAFPSELFDRFEAIQPVWAPYYTIHKIMAGLVDQYLFAGNS 808
           +A++SAL  CQ+ +G+GYLSAFPSELFDRFEAI+PVWAPYYTIHKI+AGL+DQY FAGNS
Sbjct: 195 SAVVSALATCQEKMGTGYLSAFPSELFDRFEAIKPVWAPYYTIHKILAGLLDQYTFAGNS 254

Query: 809 QALKMVVWMADYFGNRVQNVISKYSIEQHWKS 904
           QALKM+ WM ++F  RVQNVI+ YS+E+HW S
Sbjct: 255 QALKMMTWMVEHFYKRVQNVITMYSLERHWLS 286


>ref|NP_196800.2| uncharacterized protein [Arabidopsis thaliana]
           gi|28393685|gb|AAO42255.1| unknown protein [Arabidopsis
           thaliana] gi|332004452|gb|AED91835.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 865

 Score =  343 bits (879), Expect = 4e-92
 Identities = 179/293 (61%), Positives = 203/293 (69%), Gaps = 1/293 (0%)
 Frame = +2

Query: 29  MNSFICFTLISLFLNGFYVHILGKECTNIPTVLSSKTLRSELLSSYNDSWREAMFAQYPH 208
           M S +  T+  L    F +  L KECT+IPT LSS TLRSELL S N + +   F+ Y H
Sbjct: 6   MKSGVIITIALLLYTSFLLVCLAKECTDIPTKLSSHTLRSELLQSQNANLKSEEFSHY-H 64

Query: 209 LTHTDDEAWSDLFPRRILKKE-EELDWNKLYKLIKYSNGNTGNEKFKGNFLNEVSLHDVR 385
           LT TDD AWS L PR++LK+E ++  W  LY+  K SN +       GNFL +VSLHDVR
Sbjct: 65  LTPTDDSAWSTLLPRKMLKEETDDFAWTMLYRKFKDSNSS-------GNFLKDVSLHDVR 117

Query: 386 LDPNSMYGIGQQTNLEYXXXXXXXXXXXXFRKNARLETLGQPYGGWESPAGELRGHFVGH 565
           LDP+S +   QQTNLEY            FRK A L   G PYGGWE P  ELRGHFVGH
Sbjct: 118 LDPSSFHWRAQQTNLEYLLMLDVDGLAYNFRKEAGLNAPGVPYGGWEKPDSELRGHFVGH 177

Query: 566 YLSATALMWASTHNGTLQAKMNALISALDECQQYIGSGYLSAFPSELFDRFEAIQPVWAP 745
           YLSATA MWASTHN TL+AKM AL+SAL ECQQ  G+GYLSAFPS  FDRFEAI  VWAP
Sbjct: 178 YLSATAYMWASTHNETLKAKMTALVSALAECQQKYGTGYLSAFPSSFFDRFEAITHVWAP 237

Query: 746 YYTIHKIMAGLVDQYLFAGNSQALKMVVWMADYFGNRVQNVISKYSIEQHWKS 904
           YYTIHKI+AGLVDQY  AGN+QALKM   MADYF  RVQNVI KYS+E+HW S
Sbjct: 238 YYTIHKILAGLVDQYKLAGNTQALKMATGMADYFYGRVQNVIKKYSVERHWLS 290


>emb|CAB88260.1| putative protein [Arabidopsis thaliana]
          Length = 860

 Score =  343 bits (879), Expect = 4e-92
 Identities = 179/293 (61%), Positives = 203/293 (69%), Gaps = 1/293 (0%)
 Frame = +2

Query: 29  MNSFICFTLISLFLNGFYVHILGKECTNIPTVLSSKTLRSELLSSYNDSWREAMFAQYPH 208
           M S +  T+  L    F +  L KECT+IPT LSS TLRSELL S N + +   F+ Y H
Sbjct: 1   MKSGVIITIALLLYTSFLLVCLAKECTDIPTKLSSHTLRSELLQSQNANLKSEEFSHY-H 59

Query: 209 LTHTDDEAWSDLFPRRILKKE-EELDWNKLYKLIKYSNGNTGNEKFKGNFLNEVSLHDVR 385
           LT TDD AWS L PR++LK+E ++  W  LY+  K SN +       GNFL +VSLHDVR
Sbjct: 60  LTPTDDSAWSTLLPRKMLKEETDDFAWTMLYRKFKDSNSS-------GNFLKDVSLHDVR 112

Query: 386 LDPNSMYGIGQQTNLEYXXXXXXXXXXXXFRKNARLETLGQPYGGWESPAGELRGHFVGH 565
           LDP+S +   QQTNLEY            FRK A L   G PYGGWE P  ELRGHFVGH
Sbjct: 113 LDPSSFHWRAQQTNLEYLLMLDVDGLAYNFRKEAGLNAPGVPYGGWEKPDSELRGHFVGH 172

Query: 566 YLSATALMWASTHNGTLQAKMNALISALDECQQYIGSGYLSAFPSELFDRFEAIQPVWAP 745
           YLSATA MWASTHN TL+AKM AL+SAL ECQQ  G+GYLSAFPS  FDRFEAI  VWAP
Sbjct: 173 YLSATAYMWASTHNETLKAKMTALVSALAECQQKYGTGYLSAFPSSFFDRFEAITHVWAP 232

Query: 746 YYTIHKIMAGLVDQYLFAGNSQALKMVVWMADYFGNRVQNVISKYSIEQHWKS 904
           YYTIHKI+AGLVDQY  AGN+QALKM   MADYF  RVQNVI KYS+E+HW S
Sbjct: 233 YYTIHKILAGLVDQYKLAGNTQALKMATGMADYFYGRVQNVIKKYSVERHWLS 285


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