BLASTX nr result

ID: Coptis23_contig00000526 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000526
         (1922 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510837.1| Transcriptional corepressor SEUSS, putative ...   449   e-123
ref|XP_002279763.2| PREDICTED: uncharacterized protein LOC100265...   442   e-121
emb|CBI31834.3| unnamed protein product [Vitis vinifera]              442   e-121
ref|XP_002318837.1| predicted protein [Populus trichocarpa] gi|2...   437   e-120
ref|XP_003548218.1| PREDICTED: uncharacterized protein LOC100816...   433   e-119

>ref|XP_002510837.1| Transcriptional corepressor SEUSS, putative [Ricinus communis]
           gi|223549952|gb|EEF51439.1| Transcriptional corepressor
           SEUSS, putative [Ricinus communis]
          Length = 745

 Score =  449 bits (1155), Expect = e-123
 Identities = 213/260 (81%), Positives = 238/260 (91%)
 Frame = -1

Query: 785 VKRAYESGVCARRLMQYIYHQRHRPPENTIVYWRKFVAEYFSPRAKKRWCLSLYDNVGQH 606
           +KR Y+ G+CARRLMQY+YHQR RP EN+I YWRKFVAEY+SPRAKKRWCLSLYDNVG H
Sbjct: 176 IKRPYDGGICARRLMQYLYHQRQRPAENSIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHH 235

Query: 605 ALGVFPQATKDAWHCDICGSKSGMGFEATFEVLPRLNKVKFDSGVIDELLYLDMPRECRF 426
           ALGVFPQA  +AW CDICGSKSG GFEATFEVLPRL+++KF SGVIDELL+LD+PRECRF
Sbjct: 236 ALGVFPQAAMEAWQCDICGSKSGRGFEATFEVLPRLDEIKFGSGVIDELLFLDLPRECRF 295

Query: 425 PTGVMMLEYGKAVQESVFEQLRVVREGQLRIVFSPELKILSWEFCARRHEELLPRRMVAP 246
           P+G+MMLEYGKAVQESV+EQLRVVREGQLRI+F+ +LKILSWEFCARRHEELLPRR+VAP
Sbjct: 296 PSGIMMLEYGKAVQESVYEQLRVVREGQLRIIFTHDLKILSWEFCARRHEELLPRRVVAP 355

Query: 245 QVNQLLQVAQKYQNAVTESGSAGVSTQDLQTNWNMFLTAGRQLARNMELPLLNDLGFSKR 66
           QVNQL+QVAQK Q+ + ESG+ GVS QDLQTN NM LTAGRQLA+ +EL  LNDLGFSKR
Sbjct: 356 QVNQLVQVAQKCQSTIAESGADGVSQQDLQTNSNMVLTAGRQLAKTLELQSLNDLGFSKR 415

Query: 65  YVRCLQISEVVNSMKDLIDF 6
           YVRCLQISEVVNSMKDLIDF
Sbjct: 416 YVRCLQISEVVNSMKDLIDF 435



 Score = 58.2 bits (139), Expect = 8e-06
 Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
 Frame = -1

Query: 1223 KRQHGASTASSQPASRTGQVSFPNGQVPSSSNLE-ANYLTQIQKKPRLDIKQEDIFXXXX 1047
            ++Q GA++ASS PAS+T Q S   G   + + L+  N L+Q+QKKPRLDIKQEDI     
Sbjct: 46   QQQQGATSASSLPASQTPQASLSMGPRATGTFLQDPNNLSQVQKKPRLDIKQEDILHQQV 105

Query: 1046 XXXXXXXQDPIQLQGHN 996
                   QD +QLQ  +
Sbjct: 106  LQQLLQRQDSMQLQSRS 122


>ref|XP_002279763.2| PREDICTED: uncharacterized protein LOC100265879 [Vitis vinifera]
          Length = 864

 Score =  442 bits (1136), Expect = e-121
 Identities = 212/260 (81%), Positives = 236/260 (90%)
 Frame = -1

Query: 785  VKRAYESGVCARRLMQYIYHQRHRPPENTIVYWRKFVAEYFSPRAKKRWCLSLYDNVGQH 606
            +KR Y+SGVCARRLMQY+YHQR   P+ TI YWRKFVAEY+SPRAKKRWCLSLYDNVG H
Sbjct: 288  MKRPYDSGVCARRLMQYLYHQRQ--PDKTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGNH 345

Query: 605  ALGVFPQATKDAWHCDICGSKSGMGFEATFEVLPRLNKVKFDSGVIDELLYLDMPRECRF 426
            ALGVFPQA  DAWHC+IC SKSG GFEATFEVLPRLN++KF SGVIDELL+LD+PRECRF
Sbjct: 346  ALGVFPQAAMDAWHCEICNSKSGRGFEATFEVLPRLNEIKFGSGVIDELLFLDLPRECRF 405

Query: 425  PTGVMMLEYGKAVQESVFEQLRVVREGQLRIVFSPELKILSWEFCARRHEELLPRRMVAP 246
             +G+MMLEYGKAVQESV+EQLRVVREGQLRI+F+P+LKILSWEFCA+ HEELLPRR+VAP
Sbjct: 406  SSGIMMLEYGKAVQESVYEQLRVVREGQLRIIFTPDLKILSWEFCAQHHEELLPRRLVAP 465

Query: 245  QVNQLLQVAQKYQNAVTESGSAGVSTQDLQTNWNMFLTAGRQLARNMELPLLNDLGFSKR 66
            QVNQL+QVAQK Q+ + ESGS G+S QDLQTN NM LTAGRQLAR++E   LNDLGFSKR
Sbjct: 466  QVNQLVQVAQKCQSTIAESGSDGISQQDLQTNSNMVLTAGRQLARSLESQSLNDLGFSKR 525

Query: 65   YVRCLQISEVVNSMKDLIDF 6
            YVRCLQISEVVNSMKDLIDF
Sbjct: 526  YVRCLQISEVVNSMKDLIDF 545



 Score =  155 bits (391), Expect = 5e-35
 Identities = 107/226 (47%), Positives = 118/226 (52%), Gaps = 8/226 (3%)
 Frame = -1

Query: 1649 PSRVAGGPTQXXXXSGIFFQGDGQPQTQLXXXXXXXXXXXXXXXXXXXXXNLVPTSGDMN 1470
            PSRVAG   Q    SGIFFQGDGQ Q  +                     NL P SGD+N
Sbjct: 3    PSRVAGSLAQSSSSSGIFFQGDGQSQAVVNSHMSSSFGNSSNSIPGTGRSNLGPVSGDVN 62

Query: 1469 RA-----ANSGPSVGASSLVTDANSALSGGPHLQRSASINTESYMRLPAXXXXXXXXXXX 1305
                   ANSGPSVGASSLVTDANSALSGGPHLQRSASINTESYMRLPA           
Sbjct: 63   NTVLNSVANSGPSVGASSLVTDANSALSGGPHLQRSASINTESYMRLPASPMSFSSNNIS 122

Query: 1304 XXXXXXXXXXXXVXXXXXXXXXXXXXQKRQ--HGASTASSQPASRTGQVSFP-NGQVPSS 1134
                        V              + Q   GAS+A+S P S+ GQVS   N +VP+S
Sbjct: 123  ISGSSVMDGSSVVQQSSHQDPSSQQANQSQQHQGASSATSLPTSQAGQVSLSMNPRVPAS 182

Query: 1133 SNLEANYLTQIQKKPRLDIKQEDIFXXXXXXXXXXXQDPIQLQGHN 996
               E N  +Q+ KK RLDIKQEDI            QDP+QLQGHN
Sbjct: 183  FIQEPNNPSQVHKKARLDIKQEDILPQQIVQQILQRQDPMQLQGHN 228


>emb|CBI31834.3| unnamed protein product [Vitis vinifera]
          Length = 612

 Score =  442 bits (1136), Expect = e-121
 Identities = 212/260 (81%), Positives = 236/260 (90%)
 Frame = -1

Query: 785 VKRAYESGVCARRLMQYIYHQRHRPPENTIVYWRKFVAEYFSPRAKKRWCLSLYDNVGQH 606
           +KR Y+SGVCARRLMQY+YHQR   P+ TI YWRKFVAEY+SPRAKKRWCLSLYDNVG H
Sbjct: 191 MKRPYDSGVCARRLMQYLYHQRQ--PDKTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGNH 248

Query: 605 ALGVFPQATKDAWHCDICGSKSGMGFEATFEVLPRLNKVKFDSGVIDELLYLDMPRECRF 426
           ALGVFPQA  DAWHC+IC SKSG GFEATFEVLPRLN++KF SGVIDELL+LD+PRECRF
Sbjct: 249 ALGVFPQAAMDAWHCEICNSKSGRGFEATFEVLPRLNEIKFGSGVIDELLFLDLPRECRF 308

Query: 425 PTGVMMLEYGKAVQESVFEQLRVVREGQLRIVFSPELKILSWEFCARRHEELLPRRMVAP 246
            +G+MMLEYGKAVQESV+EQLRVVREGQLRI+F+P+LKILSWEFCA+ HEELLPRR+VAP
Sbjct: 309 SSGIMMLEYGKAVQESVYEQLRVVREGQLRIIFTPDLKILSWEFCAQHHEELLPRRLVAP 368

Query: 245 QVNQLLQVAQKYQNAVTESGSAGVSTQDLQTNWNMFLTAGRQLARNMELPLLNDLGFSKR 66
           QVNQL+QVAQK Q+ + ESGS G+S QDLQTN NM LTAGRQLAR++E   LNDLGFSKR
Sbjct: 369 QVNQLVQVAQKCQSTIAESGSDGISQQDLQTNSNMVLTAGRQLARSLESQSLNDLGFSKR 428

Query: 65  YVRCLQISEVVNSMKDLIDF 6
           YVRCLQISEVVNSMKDLIDF
Sbjct: 429 YVRCLQISEVVNSMKDLIDF 448



 Score = 65.1 bits (157), Expect(2) = 5e-11
 Identities = 38/73 (52%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
 Frame = -1

Query: 1211 GASTASSQPASRTGQVSFP-NGQVPSSSNLEANYLTQIQKKPRLDIKQEDIFXXXXXXXX 1035
            GAS+A+S P S+ GQVS   N +VP+S   E N  +Q+ KK RLDIKQEDI         
Sbjct: 85   GASSATSLPTSQAGQVSLSMNPRVPASFIQEPNNPSQVHKKARLDIKQEDILPQQIVQQI 144

Query: 1034 XXXQDPIQLQGHN 996
               QDP+QLQGHN
Sbjct: 145  LQRQDPMQLQGHN 157



 Score = 30.4 bits (67), Expect(2) = 5e-11
 Identities = 16/32 (50%), Positives = 18/32 (56%)
 Frame = -2

Query: 1408 HYQVDLIYREVPASTLNLTCDYLLHLCHSRPI 1313
            H+Q  L  REV AS  +LTC  L H C S  I
Sbjct: 49   HFQEVLTCREVQASIQSLTCACLRHPCRSHRI 80


>ref|XP_002318837.1| predicted protein [Populus trichocarpa] gi|222859510|gb|EEE97057.1|
            predicted protein [Populus trichocarpa]
          Length = 873

 Score =  437 bits (1123), Expect = e-120
 Identities = 209/260 (80%), Positives = 235/260 (90%)
 Frame = -1

Query: 785  VKRAYESGVCARRLMQYIYHQRHRPPENTIVYWRKFVAEYFSPRAKKRWCLSLYDNVGQH 606
            +KR ++ G+CARRLMQY+YHQR R  ENTI YWRKFV+EY+SPRAKKRWCLSLY+NVG H
Sbjct: 302  LKRPFDGGICARRLMQYLYHQRQRLAENTIAYWRKFVSEYYSPRAKKRWCLSLYENVGHH 361

Query: 605  ALGVFPQATKDAWHCDICGSKSGMGFEATFEVLPRLNKVKFDSGVIDELLYLDMPRECRF 426
            ALGVFPQA  +AW CD+CGSKSG GFEATFEVLPRLN++KF SGVIDELL+LD+PRE R 
Sbjct: 362  ALGVFPQAAMEAWQCDLCGSKSGRGFEATFEVLPRLNEIKFGSGVIDELLFLDLPREFRL 421

Query: 425  PTGVMMLEYGKAVQESVFEQLRVVREGQLRIVFSPELKILSWEFCARRHEELLPRRMVAP 246
             +G+MMLEY KAVQESV+EQLRVVREGQLRI+F+P+LKILSWEFCARRHEELLPRR+VAP
Sbjct: 422  HSGIMMLEYAKAVQESVYEQLRVVREGQLRIIFTPDLKILSWEFCARRHEELLPRRVVAP 481

Query: 245  QVNQLLQVAQKYQNAVTESGSAGVSTQDLQTNWNMFLTAGRQLARNMELPLLNDLGFSKR 66
            QVNQLLQVAQK Q+ + ESGS GVS QDLQTN NM LTAGRQLA+++EL  LNDLGFSKR
Sbjct: 482  QVNQLLQVAQKCQSTIAESGSDGVSQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKR 541

Query: 65   YVRCLQISEVVNSMKDLIDF 6
            YVRCLQISEVVNSMKDLIDF
Sbjct: 542  YVRCLQISEVVNSMKDLIDF 561



 Score =  158 bits (400), Expect = 4e-36
 Identities = 110/228 (48%), Positives = 120/228 (52%), Gaps = 9/228 (3%)
 Frame = -1

Query: 1652 VPSRVAGGPTQXXXXSGIFFQGDGQPQTQLXXXXXXXXXXXXXXXXXXXXXNLVPTSGDM 1473
            VPSRVAG   Q    SGIFFQGDGQ Q  +                     NL P SGDM
Sbjct: 2    VPSRVAGALAQSSSSSGIFFQGDGQSQGLVNSHLSSSFGNSSNSIPGTGRPNLGPVSGDM 61

Query: 1472 NRA-----ANSGPSVGASSLVTDANSALSGGPHLQRSASINTESYMRLPA---XXXXXXX 1317
            N A     ANSGPSVGASSLVTDANSALSGGPHLQRSASINTESYMRLPA          
Sbjct: 62   NNAVLNSVANSGPSVGASSLVTDANSALSGGPHLQRSASINTESYMRLPASPMSFSSNNI 121

Query: 1316 XXXXXXXXXXXXXXXXVXXXXXXXXXXXXXQKRQHGASTASSQPASRTGQVSFPNGQVPS 1137
                                          Q++QHGAS+A+S P S+ GQVS P G    
Sbjct: 122  SISGSSVVDGSSVVQQGNHQDRNVQQVLQNQQQQHGASSATSLPTSQIGQVSLPMGPRGQ 181

Query: 1136 SSNL-EANYLTQIQKKPRLDIKQEDIFXXXXXXXXXXXQDPIQLQGHN 996
             S L + N L+Q+QKKPRLDIKQEDI            QD +QLQ  N
Sbjct: 182  GSFLQDHNNLSQVQKKPRLDIKQEDILQQQLLQQLLQRQDSMQLQNRN 229


>ref|XP_003548218.1| PREDICTED: uncharacterized protein LOC100816886 [Glycine max]
          Length = 869

 Score =  433 bits (1113), Expect = e-119
 Identities = 210/261 (80%), Positives = 234/261 (89%), Gaps = 3/261 (1%)
 Frame = -1

Query: 782  KRAYESGV---CARRLMQYIYHQRHRPPENTIVYWRKFVAEYFSPRAKKRWCLSLYDNVG 612
            KR Y+SGV   CARRLMQY+YHQR RP +N+I YWRKFVAEY+SPRAKKRWCLSLY NVG
Sbjct: 297  KRPYDSGVSGVCARRLMQYLYHQRQRPNDNSIAYWRKFVAEYYSPRAKKRWCLSLYSNVG 356

Query: 611  QHALGVFPQATKDAWHCDICGSKSGMGFEATFEVLPRLNKVKFDSGVIDELLYLDMPREC 432
             HALGVFPQA  DAW CD+CGSKSG GFEAT+EVLPRLN++KF SGVIDELL+LD+PRE 
Sbjct: 357  HHALGVFPQAAMDAWQCDMCGSKSGRGFEATYEVLPRLNEIKFGSGVIDELLFLDLPRET 416

Query: 431  RFPTGVMMLEYGKAVQESVFEQLRVVREGQLRIVFSPELKILSWEFCARRHEELLPRRMV 252
            RFP+GVMMLEY KA+QESV+EQLRVVREGQLRI+F+ +LKILSWEFCARRHEELLPRR+V
Sbjct: 417  RFPSGVMMLEYAKAIQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELLPRRLV 476

Query: 251  APQVNQLLQVAQKYQNAVTESGSAGVSTQDLQTNWNMFLTAGRQLARNMELPLLNDLGFS 72
            APQVNQL+QVAQK Q+ + ESG+ GVS QDLQTN NM LTAGRQLA+ +EL  LNDLGFS
Sbjct: 477  APQVNQLVQVAQKCQSTIAESGADGVSQQDLQTNSNMVLTAGRQLAKILELQSLNDLGFS 536

Query: 71   KRYVRCLQISEVVNSMKDLID 9
            KRYVRCLQISEVVNSMKDLID
Sbjct: 537  KRYVRCLQISEVVNSMKDLID 557



 Score =  143 bits (360), Expect = 2e-31
 Identities = 100/232 (43%), Positives = 116/232 (50%), Gaps = 9/232 (3%)
 Frame = -1

Query: 1664 VPLAVPSRVAGGPTQXXXXSGIFFQGDGQPQTQLXXXXXXXXXXXXXXXXXXXXXNLVPT 1485
            +P   PSRVAGG  Q    SGIFFQGDGQ Q  +                     NL P 
Sbjct: 1    MPPMTPSRVAGGLAQSSSHSGIFFQGDGQSQNVVNSDLSSSFVNSSSTVPGAGRSNLGPV 60

Query: 1484 SGDMNRAA-----NSGPSVGASSLVTDANSALSGGPHLQRSASINTESYMRLPAXXXXXX 1320
            SG MN A      NS PSVGASSLVTDANSALSGGPHLQRSAS+NT+SY+RLPA      
Sbjct: 61   SGGMNNAVLNSVPNSAPSVGASSLVTDANSALSGGPHLQRSASVNTDSYLRLPASPMSFT 120

Query: 1319 XXXXXXXXXXXXXXXXXVXXXXXXXXXXXXXQKRQ---HGASTASSQPASRTGQVSFPNG 1149
                             V             Q+ Q    GAS+A+S PAS+TG      G
Sbjct: 121  SNNISISGSSVMDGSSVVQQSSHQDQNVQQLQQNQQQPQGASSATSLPASQTGLSPLQMG 180

Query: 1148 -QVPSSSNLEANYLTQIQKKPRLDIKQEDIFXXXXXXXXXXXQDPIQLQGHN 996
             QVP S   + N ++ + KKPR+DIKQED+            QD +Q QG N
Sbjct: 181  AQVPGSFIQDPNNMSHLSKKPRMDIKQEDVMQQQVIQQILQRQDSMQFQGRN 232


Top