BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000497
         (980 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containi...   281   1e-73
ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containi...   281   2e-73
emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]   281   2e-73
ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containi...   274   2e-71
ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containi...   270   5e-70

>ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Glycine max]
          Length = 830

 Score =  281 bits (720), Expect = 1e-73
 Identities = 141/221 (63%), Positives = 173/221 (78%)
 Frame = -1

Query: 665 PIIKAPQFDYSGVGFGDGELLEFLSAKGKSLLNLIINLPVSELKSFFDSVESELCEVDVV 486
           PII   QFD +           FLS KGK LLN ++  P+ EL  FF+SV+ EL E D  
Sbjct: 94  PIIDEDQFDDAK--------FRFLSDKGKLLLNSVVGSPLHELNDFFNSVKFELLEADFP 145

Query: 485 SLLKGLEISGNWSKAVLLFQWVHSNSNSENTRRLNDQVIEVMIRILGRESQHSIACKLFD 306
           SLLK L++SGNW +A+LLF+W   +  S+   RL++QV+E+M+RILGRESQHSIA KLFD
Sbjct: 146 SLLKALDLSGNWERALLLFEWGWLHFGSDQNLRLDNQVVELMVRILGRESQHSIASKLFD 205

Query: 305 AVPVEDYSLDVRSFTSVLHAYARTGKYERAISLFEAIKAKGLKPTLVTYNVMLDVYGKMG 126
            +PVE YSLDVR++T++LHAYAR+GKY+RAI LF+ ++  GL PTLVTYNVMLDVYGKMG
Sbjct: 206 LIPVEKYSLDVRAYTTILHAYARSGKYKRAIDLFDKMEGIGLDPTLVTYNVMLDVYGKMG 265

Query: 125 RSWNKILELLDEIRNNGLEFDEFTCSTVISACGREGMLEEA 3
           RSW +ILELLDE+R+ GLEFDEFTCSTVISACGREGML+EA
Sbjct: 266 RSWGRILELLDEMRSKGLEFDEFTCSTVISACGREGMLDEA 306


>ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
           [Vitis vinifera] gi|297735424|emb|CBI17864.3| unnamed
           protein product [Vitis vinifera]
          Length = 821

 Score =  281 bits (719), Expect = 2e-73
 Identities = 136/201 (67%), Positives = 171/201 (85%)
 Frame = -1

Query: 605 LEFLSAKGKSLLNLIINLPVSELKSFFDSVESELCEVDVVSLLKGLEISGNWSKAVLLFQ 426
           +EFLS KGK LLN I+  P+  L  FFDSV+ EL +VD+VSLLKGL++SGNW +AVLLF+
Sbjct: 100 VEFLSRKGKFLLNSIVEHPLPGLNDFFDSVKFELLDVDLVSLLKGLDLSGNWKRAVLLFK 159

Query: 425 WVHSNSNSENTRRLNDQVIEVMIRILGRESQHSIACKLFDAVPVEDYSLDVRSFTSVLHA 246
           W   N  S N  ++++Q++E+M+RILGRESQHS+A +L D + VE+YSLDVR++T++LHA
Sbjct: 160 WAILNLYSRN-EKIDNQLVELMVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHA 218

Query: 245 YARTGKYERAISLFEAIKAKGLKPTLVTYNVMLDVYGKMGRSWNKILELLDEIRNNGLEF 66
           Y+R GKYERAI++FE ++  GL PTLVTYNVMLDVYGKMGRSWNKIL LLDE+R+NGLEF
Sbjct: 219 YSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEF 278

Query: 65  DEFTCSTVISACGREGMLEEA 3
           DEFTCSTVISACGREG+L+EA
Sbjct: 279 DEFTCSTVISACGREGLLDEA 299



 Score = 70.5 bits (171), Expect = 6e-10
 Identities = 52/210 (24%), Positives = 103/210 (49%), Gaps = 3/210 (1%)
 Frame = -1

Query: 635 SGVGFGDGELLEFLSAKGKSLLNLIINLPVSELKSFFDSVESELCEVDVV---SLLKGLE 465
           +G+ F +      +SA G+  L       + E + FF  ++SE          SLL+   
Sbjct: 274 NGLEFDEFTCSTVISACGREGL-------LDEARKFFARLKSEGYVAGTFTYNSLLQVFG 326

Query: 464 ISGNWSKAVLLFQWVHSNSNSENTRRLNDQVIEVMIRILGRESQHSIACKLFDAVPVEDY 285
            +G +S+A+ + + +  N+   +    N+ V   +     R   H       D +  +  
Sbjct: 327 KAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYV-----RAGFHEEGADFIDTMIRKGI 381

Query: 284 SLDVRSFTSVLHAYARTGKYERAISLFEAIKAKGLKPTLVTYNVMLDVYGKMGRSWNKIL 105
             +  ++T+V++AY + GK ++A+S F  +K  G  P + TYN +L + GK  R   +++
Sbjct: 382 MPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSR-LEEMI 440

Query: 104 ELLDEIRNNGLEFDEFTCSTVISACGREGM 15
           ++L ++R+NG   +  T +T+++ CG +GM
Sbjct: 441 DMLCDMRSNGCAPNSVTWNTMLAMCGNKGM 470



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 39/117 (33%), Positives = 63/117 (53%)
 Frame = -1

Query: 353 ILGRESQHSIACKLFDAVPVEDYSLDVRSFTSVLHAYARTGKYERAISLFEAIKAKGLKP 174
           ++G E      CK         Y  D+  F S+L  +A+   Y+RA  +   I+  GL+P
Sbjct: 611 LMGMERAFQEFCK-------HGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQP 663

Query: 173 TLVTYNVMLDVYGKMGRSWNKILELLDEIRNNGLEFDEFTCSTVISACGREGMLEEA 3
            LVTYN ++D+Y + G  W K  E+L  I+ +G + D  + +TVI    R+G+++EA
Sbjct: 664 DLVTYNSLMDMYARGGECW-KGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEA 719


>emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
          Length = 821

 Score =  281 bits (719), Expect = 2e-73
 Identities = 136/201 (67%), Positives = 171/201 (85%)
 Frame = -1

Query: 605 LEFLSAKGKSLLNLIINLPVSELKSFFDSVESELCEVDVVSLLKGLEISGNWSKAVLLFQ 426
           +EFLS KGK LLN I+  P+  L  FFDSV+ EL +VD+VSLLKGL++SGNW +AVLLF+
Sbjct: 100 VEFLSRKGKFLLNSIVEHPLPGLNDFFDSVKFELLDVDLVSLLKGLDLSGNWKRAVLLFK 159

Query: 425 WVHSNSNSENTRRLNDQVIEVMIRILGRESQHSIACKLFDAVPVEDYSLDVRSFTSVLHA 246
           W   N  S N  ++++Q++E+M+RILGRESQHS+A +L D + VE+YSLDVR++T++LHA
Sbjct: 160 WAILNLYSRN-EKIDNQLVELMVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHA 218

Query: 245 YARTGKYERAISLFEAIKAKGLKPTLVTYNVMLDVYGKMGRSWNKILELLDEIRNNGLEF 66
           Y+R GKYERAI++FE ++  GL PTLVTYNVMLDVYGKMGRSWNKIL LLDE+R+NGLEF
Sbjct: 219 YSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEF 278

Query: 65  DEFTCSTVISACGREGMLEEA 3
           DEFTCSTVISACGREG+L+EA
Sbjct: 279 DEFTCSTVISACGREGLLDEA 299



 Score = 70.5 bits (171), Expect = 6e-10
 Identities = 52/210 (24%), Positives = 103/210 (49%), Gaps = 3/210 (1%)
 Frame = -1

Query: 635 SGVGFGDGELLEFLSAKGKSLLNLIINLPVSELKSFFDSVESELCEVDVV---SLLKGLE 465
           +G+ F +      +SA G+  L       + E + FF  ++SE          SLL+   
Sbjct: 274 NGLEFDEFTCSTVISACGREGL-------LDEARKFFARLKSEGYVAGTFTYNSLLQVFG 326

Query: 464 ISGNWSKAVLLFQWVHSNSNSENTRRLNDQVIEVMIRILGRESQHSIACKLFDAVPVEDY 285
            +G +S+A+ + + +  N+   +    N+ V   +     R   H       D +  +  
Sbjct: 327 KAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYV-----RAGFHEEGADFIDTMIRKGI 381

Query: 284 SLDVRSFTSVLHAYARTGKYERAISLFEAIKAKGLKPTLVTYNVMLDVYGKMGRSWNKIL 105
             +  ++T+V++AY + GK ++A+S F  +K  G  P + TYN +L + GK  R   +++
Sbjct: 382 MPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSR-LEEMI 440

Query: 104 ELLDEIRNNGLEFDEFTCSTVISACGREGM 15
           ++L ++R+NG   +  T +T+++ CG +GM
Sbjct: 441 DMLCDMRSNGCAPNSVTWNTMLAMCGNKGM 470



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 39/117 (33%), Positives = 63/117 (53%)
 Frame = -1

Query: 353 ILGRESQHSIACKLFDAVPVEDYSLDVRSFTSVLHAYARTGKYERAISLFEAIKAKGLKP 174
           ++G E      CK         Y  D+  F S+L  +A+   Y+RA  +   I+  GL+P
Sbjct: 611 LMGMERAFQEFCK-------HGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQP 663

Query: 173 TLVTYNVMLDVYGKMGRSWNKILELLDEIRNNGLEFDEFTCSTVISACGREGMLEEA 3
            LVTYN ++D+Y + G  W K  E+L  I+ +G + D  + +TVI    R+G+++EA
Sbjct: 664 DLVTYNSLMDMYARGGECW-KGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEA 719


>ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Glycine max]
          Length = 829

 Score =  274 bits (701), Expect = 2e-71
 Identities = 134/199 (67%), Positives = 164/199 (82%)
 Frame = -1

Query: 599 FLSAKGKSLLNLIINLPVSELKSFFDSVESELCEVDVVSLLKGLEISGNWSKAVLLFQWV 420
           FLS KGK L + I+  P+ EL  FF+SV+ EL E D  SLLK L++SGNW +A+LLF+W 
Sbjct: 107 FLSDKGKLLFSSIVGSPLHELNDFFNSVKFELLEADFPSLLKALDLSGNWERALLLFEWG 166

Query: 419 HSNSNSENTRRLNDQVIEVMIRILGRESQHSIACKLFDAVPVEDYSLDVRSFTSVLHAYA 240
             +  S+   RL++QV+E+M+RILGRESQHSIA KLFD +PVE YSLDVR++T++LH+YA
Sbjct: 167 WLHFGSDQNLRLDNQVVELMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHSYA 226

Query: 239 RTGKYERAISLFEAIKAKGLKPTLVTYNVMLDVYGKMGRSWNKILELLDEIRNNGLEFDE 60
           RTGKY+RAI LF  +K  GL PTLVTYNVMLDVYGKMGRSW++ILELLDE+R+ GLE DE
Sbjct: 227 RTGKYKRAIDLFGKMKEIGLDPTLVTYNVMLDVYGKMGRSWDRILELLDEMRSKGLELDE 286

Query: 59  FTCSTVISACGREGMLEEA 3
           FTCSTVISACGREGML+EA
Sbjct: 287 FTCSTVISACGREGMLDEA 305



 Score = 63.5 bits (153), Expect = 7e-08
 Identities = 36/105 (34%), Positives = 58/105 (55%)
 Frame = -1

Query: 317 KLFDAVPVEDYSLDVRSFTSVLHAYARTGKYERAISLFEAIKAKGLKPTLVTYNVMLDVY 138
           + FD +    Y  D+    S+L  +AR   + +A  +   I   GL+P L TYN ++D+Y
Sbjct: 622 RAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLY 681

Query: 137 GKMGRSWNKILELLDEIRNNGLEFDEFTCSTVISACGREGMLEEA 3
            + G  W K  E+L  I+N+G E D  + +TVI    R+G+++EA
Sbjct: 682 VREGECW-KAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEA 725



 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 13/213 (6%)
 Frame = -1

Query: 605 LEFLSAKGKSLLNLIINLPVSEL---------KSFFDSVESELCEVDV---VSLLKGLEI 462
           L F S +   L N ++ L V  L            FD +  E   +DV    ++L     
Sbjct: 168 LHFGSDQNLRLDNQVVELMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHSYAR 227

Query: 461 SGNWSKAVLLFQWVHSNSNSENTRRLNDQVIEVMIRILGRESQH-SIACKLFDAVPVEDY 285
           +G + +A+ LF  +            N     VM+ + G+  +      +L D +  +  
Sbjct: 228 TGKYKRAIDLFGKMKEIGLDPTLVTYN-----VMLDVYGKMGRSWDRILELLDEMRSKGL 282

Query: 284 SLDVRSFTSVLHAYARTGKYERAISLFEAIKAKGLKPTLVTYNVMLDVYGKMGRSWNKIL 105
            LD  + ++V+ A  R G  + A      +K  G KP  VTYN ML V+GK G  + + L
Sbjct: 283 ELDEFTCSTVISACGREGMLDEARKFLAELKFNGYKPGTVTYNSMLQVFGKAG-IYTEAL 341

Query: 104 ELLDEIRNNGLEFDEFTCSTVISACGREGMLEE 6
            +L E+ +N    D  T + + +   R G L+E
Sbjct: 342 SILKEMEDNNCPPDSVTYNELAATYVRAGFLDE 374


>ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Cucumis sativus]
           gi|449507064|ref|XP_004162923.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g18940-like [Cucumis sativus]
          Length = 844

 Score =  270 bits (689), Expect = 5e-70
 Identities = 138/226 (61%), Positives = 178/226 (78%), Gaps = 2/226 (0%)
 Frame = -1

Query: 674 QIKPII--KAPQFDYSGVGFGDGELLEFLSAKGKSLLNLIINLPVSELKSFFDSVESELC 501
           Q+K ++   APQF+YS     DG L +FLS KG  LLN I   P   L + FDSV+SEL 
Sbjct: 99  QLKKLVLNSAPQFEYSDKEIRDGPL-QFLSKKGICLLNSIAAEPFDSLNALFDSVKSELL 157

Query: 500 EVDVVSLLKGLEISGNWSKAVLLFQWVHSNSNSENTRRLNDQVIEVMIRILGRESQHSIA 321
           EVD+VSLLK L++ G   +A+LLF+WV SNS S + + L+ + +E+MIRILGRES++SIA
Sbjct: 158 EVDIVSLLKALDVLGKSERAILLFEWVVSNSVSGDVK-LDSKAVELMIRILGRESKYSIA 216

Query: 320 CKLFDAVPVEDYSLDVRSFTSVLHAYARTGKYERAISLFEAIKAKGLKPTLVTYNVMLDV 141
            KL D +P++ YSLDVR+ T++LHAY+R GKY++AI++FE +K  GL P+LVTYNVMLDV
Sbjct: 217 LKLLDKIPIDKYSLDVRACTTILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYNVMLDV 276

Query: 140 YGKMGRSWNKILELLDEIRNNGLEFDEFTCSTVISACGREGMLEEA 3
           YGKMGRSW+KIL+LLDE+RN GL+FDEFTCSTVISACGREG++ EA
Sbjct: 277 YGKMGRSWDKILDLLDEMRNEGLQFDEFTCSTVISACGREGLINEA 322



 Score = 70.1 bits (170), Expect = 8e-10
 Identities = 47/180 (26%), Positives = 95/180 (52%), Gaps = 3/180 (1%)
 Frame = -1

Query: 548 VSELKSFFDSVESELCEVDVVS---LLKGLEISGNWSKAVLLFQWVHSNSNSENTRRLND 378
           ++E K FF  ++S   E   V+   LL+    +G +S+A+ + + +  N+ + ++   N+
Sbjct: 319 INEAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNE 378

Query: 377 QVIEVMIRILGRESQHSIACKLFDAVPVEDYSLDVRSFTSVLHAYARTGKYERAISLFEA 198
            V   +     R   +     + D +  +    +  ++T+V++AY R GK  +A+ LF  
Sbjct: 379 LVAAYV-----RAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQ 433

Query: 197 IKAKGLKPTLVTYNVMLDVYGKMGRSWNKILELLDEIRNNGLEFDEFTCSTVISACGREG 18
           +K  G  P + TYN +L + GK  RS  +++++L ++R NG   +  T +T+++ CG +G
Sbjct: 434 MKKSGCVPNVCTYNSILALLGKKSRS-EEMIKILSDMRINGCPPNRITWNTLLAMCGDKG 492



 Score = 66.6 bits (161), Expect = 9e-09
 Identities = 34/105 (32%), Positives = 60/105 (57%)
 Frame = -1

Query: 317 KLFDAVPVEDYSLDVRSFTSVLHAYARTGKYERAISLFEAIKAKGLKPTLVTYNVMLDVY 138
           + F+ +    Y  D+  F S+L  +A+   YERA  + + I+  GL+P LVTYN ++++Y
Sbjct: 639 RAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMY 698

Query: 137 GKMGRSWNKILELLDEIRNNGLEFDEFTCSTVISACGREGMLEEA 3
            + G  W K  E+L  +  +G   D  + +T+I    R+G+++EA
Sbjct: 699 ARRGECW-KAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEA 742



 Score = 60.1 bits (144), Expect = 8e-07
 Identities = 45/177 (25%), Positives = 82/177 (46%), Gaps = 4/177 (2%)
 Frame = -1

Query: 524 DSVESELCEVDV---VSLLKGLEISGNWSKAVLLFQWVHSNSNSENTRRLNDQVIEVMIR 354
           D +  +   +DV    ++L     +G + +A+ +F+ +     S +    N     VM+ 
Sbjct: 221 DKIPIDKYSLDVRACTTILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYN-----VMLD 275

Query: 353 ILGRESQH-SIACKLFDAVPVEDYSLDVRSFTSVLHAYARTGKYERAISLFEAIKAKGLK 177
           + G+  +       L D +  E    D  + ++V+ A  R G    A   F  +K+ G +
Sbjct: 276 VYGKMGRSWDKILDLLDEMRNEGLQFDEFTCSTVISACGREGLINEAKEFFVELKSSGYE 335

Query: 176 PTLVTYNVMLDVYGKMGRSWNKILELLDEIRNNGLEFDEFTCSTVISACGREGMLEE 6
           P  VTYN +L V+GK G  +++ L +L E+ +N    D  T + +++A  R G  EE
Sbjct: 336 PGTVTYNALLQVFGKAG-IYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEE 391



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 28/119 (23%), Positives = 66/119 (55%)
 Frame = -1

Query: 362 MIRILGRESQHSIACKLFDAVPVEDYSLDVRSFTSVLHAYARTGKYERAISLFEAIKAKG 183
           ++++ G+   +S A  +   +   + +LD  ++  ++ AY R G YE   ++ + +  KG
Sbjct: 344 LLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKG 403

Query: 182 LKPTLVTYNVMLDVYGKMGRSWNKILELLDEIRNNGLEFDEFTCSTVISACGREGMLEE 6
           + P  VTY  +++ YG+ G+   K L+L ++++ +G   +  T +++++  G++   EE
Sbjct: 404 VMPNAVTYTTVINAYGRAGKE-VKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEE 461