BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000486
         (1201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170902.1| PREDICTED: uncharacterized protein LOC101226...   288   1e-75
ref|XP_004148436.1| PREDICTED: upstream activation factor subuni...   288   1e-75
ref|XP_003611801.1| Upstream activation factor subunit spp27 [Me...   288   2e-75
ref|XP_003537360.1| PREDICTED: uncharacterized protein LOC100786...   284   4e-74
emb|CAN83123.1| hypothetical protein VITISV_044372 [Vitis vinifera]   283   6e-74

>ref|XP_004170902.1| PREDICTED: uncharacterized protein LOC101226406, partial [Cucumis
            sativus]
          Length = 225

 Score =  288 bits (738), Expect = 1e-75
 Identities = 134/218 (61%), Positives = 174/218 (79%)
 Frame = +2

Query: 383  GGGFNKVCSLSPELQQLLGVPELARTEVVKQLWAYIRENDLQDPSNRKNIKCDEPLRLLF 562
            GGGF K+CSLSP+LQ+ +G PE+ARTEVVKQLW +IREN+LQDPSNR+NI CDEPL+ LF
Sbjct: 8    GGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALF 67

Query: 563  RVDIINMFQMNKALSRHIWPLDSENVTSTANEKQRNKEKPEATVASAPKEKRKQERHEDD 742
             V+ INMFQMNKALS+HIWPL+S +V    + ++   +K +       K+++KQ + ED 
Sbjct: 68   GVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEEDS 127

Query: 743  DESQVKEKRQRRAGLGFLAPLPLSDALAKFIGTGESILPRSTVVKRIWDYIKANDLQDPN 922
            D+S  ++KRQ++   GFLAPLPLS+AL  F+GTGE  LPRS VVKR+WDYIK N+LQDP+
Sbjct: 128  DDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPS 187

Query: 923  DKKMVLCDDKLKELFEVDSFTGFTVPKLLKTHFIKTER 1036
            DK+ ++CD++LKELF+VDSF GFTV KLL THFIK ++
Sbjct: 188  DKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMKQ 225


>ref|XP_004148436.1| PREDICTED: upstream activation factor subunit UAF30-like [Cucumis
            sativus]
          Length = 332

 Score =  288 bits (738), Expect = 1e-75
 Identities = 134/218 (61%), Positives = 174/218 (79%)
 Frame = +2

Query: 383  GGGFNKVCSLSPELQQLLGVPELARTEVVKQLWAYIRENDLQDPSNRKNIKCDEPLRLLF 562
            GGGF K+CSLSP+LQ+ +G PE+ARTEVVKQLW +IREN+LQDPSNR+NI CDEPL+ LF
Sbjct: 115  GGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALF 174

Query: 563  RVDIINMFQMNKALSRHIWPLDSENVTSTANEKQRNKEKPEATVASAPKEKRKQERHEDD 742
             V+ INMFQMNKALS+HIWPL+S +V    + ++   +K +       K+++KQ + ED 
Sbjct: 175  GVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKPQKEKQPKEKPQKKRQKQGKEEDS 234

Query: 743  DESQVKEKRQRRAGLGFLAPLPLSDALAKFIGTGESILPRSTVVKRIWDYIKANDLQDPN 922
            D+S  ++KRQ++   GFLAPLPLS+AL  F+GTGE  LPRS VVKR+WDYIK N+LQDP+
Sbjct: 235  DDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPS 294

Query: 923  DKKMVLCDDKLKELFEVDSFTGFTVPKLLKTHFIKTER 1036
            DK+ ++CD++LKELF+VDSF GFTV KLL THFIK ++
Sbjct: 295  DKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMKQ 332



 Score = 94.7 bits (234), Expect = 4e-17
 Identities = 47/60 (78%), Positives = 53/60 (88%)
 Frame = +2

Query: 8   MVSDSELIVRLREFLKTSDLNTTTNAIVRRKLEEDFGIDLSDKKAFIRSQVDIFIHSQVE 187
           MVSDSELI RLR+FL+ SDLNTTT AIVRRKLEEDFGIDLSDKK FIR QVD+F+ ++ E
Sbjct: 1   MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHE 60



 Score = 76.6 bits (187), Expect = 1e-11
 Identities = 37/96 (38%), Positives = 62/96 (64%)
 Frame = +2

Query: 731  HEDDDESQVKEKRQRRAGLGFLAPLPLSDALAKFIGTGESILPRSTVVKRIWDYIKANDL 910
            +EDD++ +   ++ ++ G GF     LS  L +FIG  E  + R+ VVK++W++I+ N+L
Sbjct: 98   NEDDEKGKTSSEKVKKRGGGFTKLCSLSPQLQEFIGAPE--MARTEVVKQLWNHIRENNL 155

Query: 911  QDPNDKKMVLCDDKLKELFEVDSFTGFTVPKLLKTH 1018
            QDP++++ +LCD+ LK LF V+S   F + K L  H
Sbjct: 156  QDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKH 191


>ref|XP_003611801.1| Upstream activation factor subunit spp27 [Medicago truncatula]
            gi|355513136|gb|AES94759.1| Upstream activation factor
            subunit spp27 [Medicago truncatula]
          Length = 361

 Score =  288 bits (736), Expect = 2e-75
 Identities = 147/221 (66%), Positives = 174/221 (78%), Gaps = 3/221 (1%)
 Frame = +2

Query: 383  GGGFNKVCSLSPELQQLLGVPELARTEVVKQLWAYIRENDLQDPSNRKNIKCDEPLRLLF 562
            GGGF K+CSLSP+LQ+ +G PE+ARTEVVKQLWAYIRE DLQDP+NR+NI CDEPLR LF
Sbjct: 129  GGGFCKICSLSPQLQEFVGAPEMARTEVVKQLWAYIREKDLQDPNNRRNIICDEPLRALF 188

Query: 563  RVDIINMFQMNKALSRHIWPLDSENVTSTANEKQRNKEKPEATVASAPKEKRKQERHEDD 742
             VD INMFQMNK L++HIWPLDS++V      K   KEKP      A KEK+K++  EDD
Sbjct: 189  GVDTINMFQMNKVLAKHIWPLDSDDVIQV---KSAPKEKPAPKEKPARKEKKKKQEREDD 245

Query: 743  --DESQVKEKRQR-RAGLGFLAPLPLSDALAKFIGTGESILPRSTVVKRIWDYIKANDLQ 913
              DE + KEKRQ+  +G GFLAPL LSDALAKF+  GES L RS V+KR+WDYIK N+LQ
Sbjct: 246  DLDEPKGKEKRQKVGSGKGFLAPLQLSDALAKFL--GESELSRSDVIKRMWDYIKGNNLQ 303

Query: 914  DPNDKKMVLCDDKLKELFEVDSFTGFTVPKLLKTHFIKTER 1036
            DP+DK+ +LCD+KLKELF+VDSF GFTV KLL  HFIK E+
Sbjct: 304  DPSDKRQILCDEKLKELFDVDSFVGFTVTKLLAPHFIKAEQ 344



 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 41/57 (71%), Positives = 50/57 (87%)
 Frame = +2

Query: 8   MVSDSELIVRLREFLKTSDLNTTTNAIVRRKLEEDFGIDLSDKKAFIRSQVDIFIHS 178
           MVS+SELI RLREFL+ SDLNTTT + VRR+LE DFGIDLSD+K+FIR QVD+F+ +
Sbjct: 1   MVSESELIDRLREFLRNSDLNTTTTSTVRRQLESDFGIDLSDRKSFIREQVDLFLQT 57



 Score = 73.6 bits (179), Expect = 1e-10
 Identities = 36/79 (45%), Positives = 52/79 (65%)
 Frame = +2

Query: 377 GNGGGFNKVCSLSPELQQLLGVPELARTEVVKQLWAYIRENDLQDPSNRKNIKCDEPLRL 556
           G+G GF     LS  L + LG  EL+R++V+K++W YI+ N+LQDPS+++ I CDE L+ 
Sbjct: 260 GSGKGFLAPLQLSDALAKFLGESELSRSDVIKRMWDYIKGNNLQDPSDKRQILCDEKLKE 319

Query: 557 LFRVDIINMFQMNKALSRH 613
           LF VD    F + K L+ H
Sbjct: 320 LFDVDSFVGFTVTKLLAPH 338


>ref|XP_003537360.1| PREDICTED: uncharacterized protein LOC100786835 [Glycine max]
          Length = 346

 Score =  284 bits (726), Expect = 4e-74
 Identities = 143/220 (65%), Positives = 172/220 (78%), Gaps = 2/220 (0%)
 Frame = +2

Query: 383  GGGFNKVCSLSPELQQLLGVPELARTEVVKQLWAYIRENDLQDPSNRKNIKCDEPLRLLF 562
            GGGF K+CSLSP+LQ+ +G PE+ARTEVVKQLWAYIRE +LQDP+NR+NI CDE LR LF
Sbjct: 142  GGGFCKLCSLSPQLQEFMGAPEMARTEVVKQLWAYIREKNLQDPNNRRNIICDERLRSLF 201

Query: 563  RVDIINMFQMNKALSRHIWPLDSENVTSTANEKQRNKEKPEATVASAPKEK-RKQERHED 739
             V+ INMFQMNKALS+HIWPLDS++V                 V S PKEK +KQER +D
Sbjct: 202  NVNSINMFQMNKALSKHIWPLDSDDVVQ---------------VKSTPKEKQKKQERDDD 246

Query: 740  DDESQVKEKRQRRAG-LGFLAPLPLSDALAKFIGTGESILPRSTVVKRIWDYIKANDLQD 916
             DE + KEKRQ+  G  GFLAPL LSDAL  F+GTGES L R+ V+KR+WDYIK N+LQD
Sbjct: 247  SDEPKKKEKRQKGGGKSGFLAPLQLSDALVNFLGTGESELARTDVIKRMWDYIKGNNLQD 306

Query: 917  PNDKKMVLCDDKLKELFEVDSFTGFTVPKLLKTHFIKTER 1036
            P+DK+ ++CD+KLKELF+VD+FTGFTV KLL  HFIKTE+
Sbjct: 307  PSDKRKIICDEKLKELFDVDTFTGFTVTKLLAPHFIKTEQ 346



 Score = 88.6 bits (218), Expect = 3e-15
 Identities = 43/58 (74%), Positives = 52/58 (89%)
 Frame = +2

Query: 8   MVSDSELIVRLREFLKTSDLNTTTNAIVRRKLEEDFGIDLSDKKAFIRSQVDIFIHSQ 181
           MVS+SELI RLREFL++SDLNTTT A VRR+LE DFGIDLSD+KAFIR QVD+F+ ++
Sbjct: 1   MVSESELIGRLREFLRSSDLNTTTTATVRRQLEADFGIDLSDRKAFIREQVDLFLQTE 58



 Score = 77.0 bits (188), Expect = 9e-12
 Identities = 55/219 (25%), Positives = 103/219 (47%), Gaps = 29/219 (13%)
 Frame = +2

Query: 449  LARTEVVKQLWAYIRENDLQDPSN---RKNIKCDEPLRLLFR-------VDIINMFQMNK 598
            ++ +E++ +L  ++R +DL   +    R+ ++ D  + L  R       VD+    + N+
Sbjct: 2    VSESELIGRLREFLRSSDLNTTTTATVRRQLEADFGIDLSDRKAFIREQVDLFLQTEHNQ 61

Query: 599  ALSRHIWPLDSENVTSTANEKQRNKEKPEATVASAPKEKRKQERHEDDDESQV-KEKRQR 775
            +        +         +++     PE +  S  KE   ++  E+D+E +  K K  +
Sbjct: 62   SQQEEEEKEEKHQNDHVEEQEEDAPNNPEQSQPSDSKEVTDEDEEEEDEEEEEDKPKHAK 121

Query: 776  RA------------------GLGFLAPLPLSDALAKFIGTGESILPRSTVVKRIWDYIKA 901
            +A                  G GF     LS  L +F+G  E  + R+ VVK++W YI+ 
Sbjct: 122  KAKKNKGRSNTLGDEVVKKRGGGFCKLCSLSPQLQEFMGAPE--MARTEVVKQLWAYIRE 179

Query: 902  NDLQDPNDKKMVLCDDKLKELFEVDSFTGFTVPKLLKTH 1018
             +LQDPN+++ ++CD++L+ LF V+S   F + K L  H
Sbjct: 180  KNLQDPNNRRNIICDERLRSLFNVNSINMFQMNKALSKH 218


>emb|CAN83123.1| hypothetical protein VITISV_044372 [Vitis vinifera]
          Length = 332

 Score =  283 bits (724), Expect = 6e-74
 Identities = 139/218 (63%), Positives = 167/218 (76%)
 Frame = +2

Query: 383  GGGFNKVCSLSPELQQLLGVPELARTEVVKQLWAYIRENDLQDPSNRKNIKCDEPLRLLF 562
            GGGF K+CSLSPELQ+ +GVPELARTEVVKQLW +IRE DLQDP+NR+NI CDE LR LF
Sbjct: 130  GGGFCKLCSLSPELQKFIGVPELARTEVVKQLWVHIREKDLQDPNNRRNIICDETLRALF 189

Query: 563  RVDIINMFQMNKALSRHIWPLDSENVTSTANEKQRNKEKPEATVASAPKEKRKQERHEDD 742
             VD INMFQMNKALS+HIWPLDS++                A V   PKEK++++   D 
Sbjct: 190  GVDSINMFQMNKALSKHIWPLDSDDA---------------APVKPTPKEKQRKQERXDS 234

Query: 743  DESQVKEKRQRRAGLGFLAPLPLSDALAKFIGTGESILPRSTVVKRIWDYIKANDLQDPN 922
            DE + K+KRQ+    GFLAPLPLSDAL KF+   ES L R+ VVK+IW+YIK N+LQDP+
Sbjct: 235  DEPKRKQKRQKGGNSGFLAPLPLSDALVKFLNIEESALSRAEVVKKIWEYIKQNNLQDPS 294

Query: 923  DKKMVLCDDKLKELFEVDSFTGFTVPKLLKTHFIKTER 1036
            DK+ ++CD+KLKELF+VDSF GFTVPKLL  HFIKTE+
Sbjct: 295  DKRRIICDEKLKELFDVDSFNGFTVPKLLSAHFIKTEQ 332



 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 47/60 (78%), Positives = 53/60 (88%)
 Frame = +2

Query: 8   MVSDSELIVRLREFLKTSDLNTTTNAIVRRKLEEDFGIDLSDKKAFIRSQVDIFIHSQVE 187
           MVSDSEL+ RL EFL++SDLNTTT AIVRRKLEEDFGIDLS KKAFIR  VD+F+ SQ+E
Sbjct: 1   MVSDSELVARLHEFLRSSDLNTTTTAIVRRKLEEDFGIDLSGKKAFIREHVDLFLQSQLE 60