BLASTX nr result

ID: Coptis23_contig00000483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000483
         (1594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285038.1| PREDICTED: uncharacterized protein LOC100247...   321   3e-85
ref|XP_002524446.1| conserved hypothetical protein [Ricinus comm...   321   4e-85
ref|XP_002330503.1| predicted protein [Populus trichocarpa] gi|2...   313   8e-83
ref|XP_002308310.1| predicted protein [Populus trichocarpa] gi|2...   311   3e-82
ref|XP_004150014.1| PREDICTED: uncharacterized protein LOC101211...   301   4e-79

>ref|XP_002285038.1| PREDICTED: uncharacterized protein LOC100247481 [Vitis vinifera]
          Length = 339

 Score =  321 bits (823), Expect = 3e-85
 Identities = 160/281 (56%), Positives = 199/281 (70%), Gaps = 4/281 (1%)
 Frame = +3

Query: 171  MPKERKGSSVSSDRSKASPYPCSSRSSVQSLPEPPLE---DVKEWEEARCPVCMEHPHNA 341
            MPK+R+  SVS DR +ASP+PCSS    +S P+   E   +VKEWE+ARCPVCMEHPHNA
Sbjct: 1    MPKDRRDRSVSFDRYRASPFPCSSSRGKRSSPKKSSETEKEVKEWEDARCPVCMEHPHNA 60

Query: 342  VLLLCSSHEKGCRPFMCDTSYRHSNCLDQFRKSFAEIPSSVTLQEEIADXXXXXXXXXXX 521
            VLLLCSS++KGCRP+MCDTSYRHSNCLDQFRKSF+E  S+V LQEE+             
Sbjct: 61   VLLLCSSNDKGCRPYMCDTSYRHSNCLDQFRKSFSESSSTVPLQEEMPPSDTQLSPMVTS 120

Query: 522  XXXNL-LDVRRVEDASSVPIPVPHAPCESQVQQKLMCPLCRGQIRGWVVMESARRFMNSK 698
               ++ L   R E+    P  +    CE++ Q KL+CPLCRGQI GW V+E AR FMN+K
Sbjct: 121  EATDVDLHGERSEEG---PFTMHTMSCENKTQPKLVCPLCRGQINGWTVVEPARHFMNAK 177

Query: 699  ARNCACETCEYSGAYADLRKHARVEHPCVRPSDVNLERQNAWRTLERERDLGDVLSTMRS 878
            +R+CACETC++SG Y DLRKHAR+EHP VRPS+ + ERQ  WR +ER+RDLGD+LST++S
Sbjct: 178  SRSCACETCDFSGTYTDLRKHARLEHPLVRPSEADPERQRNWRRMERQRDLGDLLSTLQS 237

Query: 879  AFMEERGTDGIFEGSSDSIFTSEDGNLLTFIFLFRVFRPGT 1001
            +F EERG         DSI   ++G  LT  FL RVFRP +
Sbjct: 238  SFGEERG--------DDSILPIDEGGWLTVFFLIRVFRPSS 270


>ref|XP_002524446.1| conserved hypothetical protein [Ricinus communis]
            gi|223536234|gb|EEF37886.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 336

 Score =  321 bits (822), Expect = 4e-85
 Identities = 164/280 (58%), Positives = 192/280 (68%), Gaps = 3/280 (1%)
 Frame = +3

Query: 171  MPKERKGSSVSSDRSKASPYPCSSRSSVQSLPEPPLE---DVKEWEEARCPVCMEHPHNA 341
            MPK+R+  SVS DR KASPY CSS  S  S P+ P E   ++KEWEEARCPVCMEHPHNA
Sbjct: 1    MPKDRRHRSVSFDRFKASPYTCSSSHSRLSSPKIPSETEENLKEWEEARCPVCMEHPHNA 60

Query: 342  VLLLCSSHEKGCRPFMCDTSYRHSNCLDQFRKSFAEIPSSVTLQEEIADXXXXXXXXXXX 521
            VLL+CSSHEKGCRP+MCDTSYRHSNCLDQFRKSFAE  S +T Q E              
Sbjct: 61   VLLVCSSHEKGCRPYMCDTSYRHSNCLDQFRKSFAET-SIITPQSEENRITTADSSAVVS 119

Query: 522  XXXNLLDVRRVEDASSVPIPVPHAPCESQVQQKLMCPLCRGQIRGWVVMESARRFMNSKA 701
                L     VE     P       CE +VQ  L+CPLCRG I+ W+VME AR FMN+K+
Sbjct: 120  SELTLT----VEQNEEGPSSTGTISCEKKVQPTLVCPLCRGHIKDWIVMEPARHFMNAKS 175

Query: 702  RNCACETCEYSGAYADLRKHARVEHPCVRPSDVNLERQNAWRTLERERDLGDVLSTMRSA 881
            R+CACETCE+SG Y+DLRKHAR+EHP VRPS  + ERQ +WR LER+RDLGD++ST+ S+
Sbjct: 176  RSCACETCEFSGTYSDLRKHARIEHPLVRPSQADPERQRSWRMLERQRDLGDLISTLNSS 235

Query: 882  FMEERGTDGIFEGSSDSIFTSEDGNLLTFIFLFRVFRPGT 1001
            F EERG         DS+   +DG  LT  FL RVFRPG+
Sbjct: 236  FGEERG--------EDSVLPIDDGGWLTVFFLIRVFRPGS 267


>ref|XP_002330503.1| predicted protein [Populus trichocarpa] gi|222872437|gb|EEF09568.1|
            predicted protein [Populus trichocarpa]
          Length = 336

 Score =  313 bits (802), Expect = 8e-83
 Identities = 159/282 (56%), Positives = 198/282 (70%), Gaps = 5/282 (1%)
 Frame = +3

Query: 171  MPKERKGSSVSSDRSKASPYPCSSRSSVQSLPEPPL---EDVKEWEEARCPVCMEHPHNA 341
            MPK+R+  S+S DR + SPY CSS  S +S P+ P    E++KEWEEARCPVCMEHPHNA
Sbjct: 1    MPKDRRDRSISFDRYRTSPYTCSSSCSRRSSPKIPSDTDENLKEWEEARCPVCMEHPHNA 60

Query: 342  VLLLCSSHEKGCRPFMCDTSYRHSNCLDQFRKSFAEIPSSVTLQEEIADXXXXXXXXXXX 521
            VLL+CSSHEKGCRP+MCDTSYRHSNCLDQFRKSF+E  +  T Q + +            
Sbjct: 61   VLLICSSHEKGCRPYMCDTSYRHSNCLDQFRKSFSET-TPTTPQPQESRLRTMNSPAVVS 119

Query: 522  XXXNLLDVR--RVEDASSVPIPVPHAPCESQVQQKLMCPLCRGQIRGWVVMESARRFMNS 695
                ++D    R E+ S   +P     CE++VQ KL+CPLCRGQI+ WVV E AR FMN+
Sbjct: 120  SVSTVIDPPEDRSEEGS---LPTETISCENKVQPKLVCPLCRGQIKEWVVTEPARSFMNA 176

Query: 696  KARNCACETCEYSGAYADLRKHARVEHPCVRPSDVNLERQNAWRTLERERDLGDVLSTMR 875
            K R+CACETC ++G+Y+DLRKHAR+EHP VRPS+ + ERQ  WR LER+RDLGD+LST++
Sbjct: 177  KPRSCACETCNFTGSYSDLRKHARLEHPLVRPSEADPERQRNWRRLERQRDLGDLLSTLQ 236

Query: 876  SAFMEERGTDGIFEGSSDSIFTSEDGNLLTFIFLFRVFRPGT 1001
            S+F EERG + I           +DG  LT  FL RVFRPG+
Sbjct: 237  SSFGEERGDEPI-----------DDGGWLTVFFLIRVFRPGS 267


>ref|XP_002308310.1| predicted protein [Populus trichocarpa] gi|222854286|gb|EEE91833.1|
            predicted protein [Populus trichocarpa]
          Length = 337

 Score =  311 bits (797), Expect = 3e-82
 Identities = 157/281 (55%), Positives = 193/281 (68%), Gaps = 4/281 (1%)
 Frame = +3

Query: 171  MPKERKGSSVSSDRSKASPYPCSSRSSVQSLPEPPLE---DVKEWEEARCPVCMEHPHNA 341
            MPK+R+  S+S DR +ASPY C+S  S +S P+ P E   ++KEWEEARC VCMEHPHNA
Sbjct: 1    MPKDRRDRSISFDRCRASPYTCNSSCSRRSSPKLPSETEENLKEWEEARCSVCMEHPHNA 60

Query: 342  VLLLCSSHEKGCRPFMCDTSYRHSNCLDQFRKSFAEIPSSVTL-QEEIADXXXXXXXXXX 518
            VLL+CSSHEKGCRP+MCDTSYRHSNCLDQF KSFAE  SS    QE              
Sbjct: 61   VLLICSSHEKGCRPYMCDTSYRHSNCLDQFCKSFAETTSSTPQSQESSLATMNSSEVVSS 120

Query: 519  XXXXNLLDVRRVEDASSVPIPVPHAPCESQVQQKLMCPLCRGQIRGWVVMESARRFMNSK 698
                 +    R E+ S   +P     CE++   KL+CPLCRGQI+ W+VME AR FMN+K
Sbjct: 121  ASTVTVPPEDRFEEGS---LPTETISCENKAHPKLVCPLCRGQIKDWLVMEPARSFMNAK 177

Query: 699  ARNCACETCEYSGAYADLRKHARVEHPCVRPSDVNLERQNAWRTLERERDLGDVLSTMRS 878
            +R+CACETC ++G Y+DLRKHAR+EHP VRPS+ + ERQ  WR LER+RD GD+LST++S
Sbjct: 178  SRSCACETCNFTGTYSDLRKHARLEHPLVRPSEADPERQRDWRRLERQRDFGDMLSTLQS 237

Query: 879  AFMEERGTDGIFEGSSDSIFTSEDGNLLTFIFLFRVFRPGT 1001
            +F EERG         D+I   +DG  LT  FL RVFRPG+
Sbjct: 238  SFGEERG---------DNILPIDDGGWLTVFFLIRVFRPGS 269


>ref|XP_004150014.1| PREDICTED: uncharacterized protein LOC101211781 [Cucumis sativus]
           gi|449526539|ref|XP_004170271.1| PREDICTED:
           uncharacterized protein LOC101228224 [Cucumis sativus]
          Length = 340

 Score =  301 bits (770), Expect = 4e-79
 Identities = 147/278 (52%), Positives = 194/278 (69%), Gaps = 3/278 (1%)
 Frame = +3

Query: 171 MPKERKGSSVSSDRSKASPYPCSSRSSVQSLPEPPL---EDVKEWEEARCPVCMEHPHNA 341
           MPKER+  S S DR +ASP+ CSS   ++S P+ PL   ++++EWEE RCPVCMEHPHNA
Sbjct: 1   MPKERRDRSASHDRYRASPFSCSSSRPIRSSPKLPLGSEDNLREWEEVRCPVCMEHPHNA 60

Query: 342 VLLLCSSHEKGCRPFMCDTSYRHSNCLDQFRKSFAEIPSSVTLQEEIADXXXXXXXXXXX 521
           VLL+CSSHEKGCRP+MCDTS RHSNCLDQF K F+E  + + +QE++             
Sbjct: 61  VLLICSSHEKGCRPYMCDTSRRHSNCLDQFCKLFSETSTVMPVQEDVQ--LPTVNSSPTM 118

Query: 522 XXXNLLDVRRVEDASSVPIPVPHAPCESQVQQKLMCPLCRGQIRGWVVMESARRFMNSKA 701
               ++D      +  + + V  + CE+Q+  KL+CPLCRG+I+ WVV + AR+FMN+K+
Sbjct: 119 ESEPVVDDTPEVQSEDIELAVHPSSCENQMPPKLVCPLCRGKIKKWVVDDHARQFMNAKS 178

Query: 702 RNCACETCEYSGAYADLRKHARVEHPCVRPSDVNLERQNAWRTLERERDLGDVLSTMRSA 881
           R+C+CETC +SG Y DLRKHAR EHP VRPS+V+ ERQ+ WR LER+RDLGD+LST++S+
Sbjct: 179 RSCSCETCSFSGTYTDLRKHARKEHPLVRPSEVDPERQHNWRRLERQRDLGDLLSTLQSS 238

Query: 882 FMEERGTDGIFEGSSDSIFTSEDGNLLTFIFLFRVFRP 995
           F ++R          DSI   +DG  LT  FL RVFRP
Sbjct: 239 FGDDR--------VDDSILPIDDGGWLTVFFLIRVFRP 268


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