BLASTX nr result

ID: Coptis23_contig00000473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000473
         (1620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312779.1| predicted protein [Populus trichocarpa] gi|2...   248   4e-63
ref|XP_002312704.1| predicted protein [Populus trichocarpa] gi|2...   244   4e-62
ref|XP_002520157.1| conserved hypothetical protein [Ricinus comm...   242   2e-61
emb|CBI32031.3| unnamed protein product [Vitis vinifera]              227   6e-57
gb|EEC75970.1| hypothetical protein OsI_13079 [Oryza sativa Indi...   189   1e-45

>ref|XP_002312779.1| predicted protein [Populus trichocarpa] gi|222852599|gb|EEE90146.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  248 bits (632), Expect = 4e-63
 Identities = 127/223 (56%), Positives = 154/223 (69%), Gaps = 4/223 (1%)
 Frame = +2

Query: 86  DGPVMSFMNKRLRALKKKYNKILQIEEASSQGKPINKDQEEVLKTKPSILTLIDEYEKLR 265
           DGPV+S + KRLRALKKK+N+ILQ+EE+ +QGKPINK+QE+ L++KPS+   IDE EKLR
Sbjct: 11  DGPVLSLITKRLRALKKKHNRILQMEESIAQGKPINKEQEDFLRSKPSVSAAIDELEKLR 70

Query: 266 QPLYTVVQEEVFLN----NKPXXXXXXXXXXXXXXXXXXXXXYFSCLFDVKQQSDFTSTM 433
           QPL   V EE+ L     N                       YF  LFDVK Q+DFT+TM
Sbjct: 71  QPLSIAVSEEIELAAHRLNPKSDSTVVPEASDEMLEDLLHLLYFGSLFDVKSQNDFTATM 130

Query: 434 LTRTHERGCCLTYDYVTXXXXXXXXXXXXXIISLLGGLVVSRPVNSILSHKNALRSCVEH 613
           LTRTHERGCCLTYDYVT             +IS+LGGL++SRP N+ LSHKNAL+ C+EH
Sbjct: 131 LTRTHERGCCLTYDYVTDDATDLLGERDLDMISMLGGLLISRPGNTSLSHKNALQRCMEH 190

Query: 614 AKLWLDNSDKAIDDAGEITYKGLRERLEKILASDYFTTSPEMK 742
           AKLWL NSD+ ID    ++Y  LRERL KI+ASDYFTT+PEMK
Sbjct: 191 AKLWLANSDQPIDSTANVSYAELRERLNKIMASDYFTTTPEMK 233


>ref|XP_002312704.1| predicted protein [Populus trichocarpa] gi|222852524|gb|EEE90071.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score =  244 bits (624), Expect = 4e-62
 Identities = 125/225 (55%), Positives = 156/225 (69%), Gaps = 5/225 (2%)
 Frame = +2

Query: 83  TDGPVMSFMNKRLRALKKKYNKILQIEEASSQGKPINKDQEEVLKTKPSILTLIDEYEKL 262
           T+GPV+S + KRLR LKKK+N+I+Q+EE+ +QGKPINK+QE+ L++KPS+   IDE EKL
Sbjct: 10  TEGPVLSLITKRLRGLKKKFNRIVQMEESIAQGKPINKEQEDFLRSKPSVAAAIDELEKL 69

Query: 263 RQPLYTVVQEEVFLN----NKPXXXXXXXXXXXXXXXXXXXXXYFSCLFDVKQQSDFTST 430
           RQPL   V EE+ L     N                       YF CLFDV+ Q+DFT+T
Sbjct: 70  RQPLSVAVSEEIELAAHRLNPKSDSTVVPEASNGVVEDLLHLFYFGCLFDVRSQNDFTAT 129

Query: 431 MLTRTHERGCCLTYDYVTXXXXXXXXXXXXXIISLLGG-LVVSRPVNSILSHKNALRSCV 607
           MLTRTHERGCCLTYDYVT             +IS+LGG L++SRPVNS LSHKNAL+ C+
Sbjct: 130 MLTRTHERGCCLTYDYVTDDATDLLSERDLDMISILGGGLIISRPVNSSLSHKNALQRCM 189

Query: 608 EHAKLWLDNSDKAIDDAGEITYKGLRERLEKILASDYFTTSPEMK 742
           EHAKLWL NSD+ ID    ++Y  LRE+L KI+ASDYFTT+PE+K
Sbjct: 190 EHAKLWLANSDQPIDSNVNVSYAELREKLNKIMASDYFTTTPEIK 234



 Score = 60.8 bits (146), Expect = 1e-06
 Identities = 51/172 (29%), Positives = 66/172 (38%), Gaps = 21/172 (12%)
 Frame = +3

Query: 882  YEQKDEETENFEGQEAGAEQSIPVEELSKDESDMVNAVENISDHKP-------------- 1019
            Y+ K++ETEN +  E G +QS P EEL KDE +  N    +SD +               
Sbjct: 265  YQPKEQETENIQ-HETGDDQSSPAEELQKDEQETENPAV-VSDQEEQDNPSTEVEVYYNQ 322

Query: 1020 ------EVDGEGQNMETKDHQYGQRRDYHN-XXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1178
                  EVD   +  E K+ QY  RR+Y N                              
Sbjct: 323  REVEHGEVDHNQREAEPKEQQYVSRRNYQNQRGGRGGGNGGRRGYSNGRGGRSGGRGGGG 382

Query: 1179 XXXXXXXHYDQPGGYYPKNYYNTXXXXXXXXXXNAFNNHGSAQGGHAPADEG 1334
                   H DQPG YY +N Y T          + +NN+GS   G APAD G
Sbjct: 383  YQTDRNQHCDQPGNYYQRNNY-TNQGRGVRGGGHTYNNNGST--GEAPADVG 431


>ref|XP_002520157.1| conserved hypothetical protein [Ricinus communis]
           gi|223540649|gb|EEF42212.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 440

 Score =  242 bits (617), Expect = 2e-61
 Identities = 124/236 (52%), Positives = 156/236 (66%), Gaps = 12/236 (5%)
 Frame = +2

Query: 71  STTTTDGPVMSFMNKRLRALKKKYNKILQIEEASSQGKPINKDQEEVLKTKPSILTLIDE 250
           S+  T+GPV++ +NKRLRAL+KKYN+I+Q+EE+ SQGKPINK+QE+VL++KP +   I+E
Sbjct: 6   SSEATEGPVLNLINKRLRALRKKYNRIIQMEESISQGKPINKEQEDVLRSKPYVTASIEE 65

Query: 251 YEKLRQPLYTVVQEEVFL------------NNKPXXXXXXXXXXXXXXXXXXXXXYFSCL 394
            EKL+QPL   V EE+ L            +                        YF  L
Sbjct: 66  LEKLKQPLSVAVSEEIDLAIQRQQQQSSSSDRTTNEANGDSNGGGLAIEDLLNLLYFGSL 125

Query: 395 FDVKQQSDFTSTMLTRTHERGCCLTYDYVTXXXXXXXXXXXXXIISLLGGLVVSRPVNSI 574
           FDVK Q++FT+TMLTRTHERGCCLTYDYVT             +IS LG L++SRPV+S 
Sbjct: 126 FDVKSQNEFTATMLTRTHERGCCLTYDYVTDDATDLLGERDLDMISKLGALLISRPVDSS 185

Query: 575 LSHKNALRSCVEHAKLWLDNSDKAIDDAGEITYKGLRERLEKILASDYFTTSPEMK 742
           LSHKNAL  C+EHAKLWL NSD+ ID    ++Y GLRERL KI+ASDYF T+PEMK
Sbjct: 186 LSHKNALVKCIEHAKLWLSNSDQFIDPIANVSYSGLRERLNKIMASDYFITTPEMK 241



 Score = 80.5 bits (197), Expect = 1e-12
 Identities = 50/156 (32%), Positives = 68/156 (43%), Gaps = 7/156 (4%)
 Frame = +3

Query: 888  QKDEETENFEGQEAGAEQSIPVEELSKDESDMVNAVENISDHKP-----EVDGEGQNMET 1052
            +++E+T NF+G E+G +QS P EE  KD+ + V   E +S  K      EVD   + ++ 
Sbjct: 282  EENEDTGNFQGHESGDDQSNPAEEFHKDDPETVVPAEEVSGEKEQEKPLEVDNIQKEVDP 341

Query: 1053 KDHQYGQRRDYHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXH-YDQPGGYYP 1229
            K+ QY  RR+Y N                                      YDQ G YY 
Sbjct: 342  KEQQYFARRNYQNQRGGRGGNGGGRRGYSNGRGGRSSGRGGGGYQNGRNQFYDQSGNYYQ 401

Query: 1230 KNYYNTXXXXXXXXXXNAFNNHGSA-QGGHAPADEG 1334
            +NYYN           + +NNHGSA  GGH PA  G
Sbjct: 402  RNYYNNRGRGGGRGGGHPYNNHGSAVHGGHGPAGVG 437


>emb|CBI32031.3| unnamed protein product [Vitis vinifera]
          Length = 399

 Score =  227 bits (579), Expect = 6e-57
 Identities = 119/224 (53%), Positives = 151/224 (67%)
 Frame = +2

Query: 71  STTTTDGPVMSFMNKRLRALKKKYNKILQIEEASSQGKPINKDQEEVLKTKPSILTLIDE 250
           ++  TDGPV+S +NKRLR L+KKYN+I Q+EEA +QGKPINK+QE+VL++KP++    D+
Sbjct: 3   ASDVTDGPVLSLINKRLRGLRKKYNRITQMEEAIAQGKPINKEQEDVLRSKPAVTDGADD 62

Query: 251 YEKLRQPLYTVVQEEVFLNNKPXXXXXXXXXXXXXXXXXXXXXYFSCLFDVKQQSDFTST 430
            E+  +P    +  E  LN                        YF  LFDVK Q+DFTST
Sbjct: 63  GEE--KPESDHLNVENLLN----------------------LLYFGYLFDVKPQTDFTST 98

Query: 431 MLTRTHERGCCLTYDYVTXXXXXXXXXXXXXIISLLGGLVVSRPVNSILSHKNALRSCVE 610
           MLTRTHERGCCLTYDYVT             +IS L GL++SRPV+S LSHKNAL+ C+E
Sbjct: 99  MLTRTHERGCCLTYDYVTDDATDLLGERDLDLISQLSGLLISRPVDSSLSHKNALQRCIE 158

Query: 611 HAKLWLDNSDKAIDDAGEITYKGLRERLEKILASDYFTTSPEMK 742
           HA+LWL NSD+ I+    +TY GLRE+L KI+ASDYFTT+PEMK
Sbjct: 159 HARLWLANSDRPIEPDATVTYAGLREKLNKIMASDYFTTTPEMK 202



 Score = 79.3 bits (194), Expect = 3e-12
 Identities = 51/160 (31%), Positives = 72/160 (45%), Gaps = 9/160 (5%)
 Frame = +3

Query: 882  YEQKDEETENFEGQEAGAEQSIPVEELSKDESDMVNAVENIS------DHKPEVDGEGQN 1043
            Y+QKDE+  N +G E G +QS PVEEL +DE ++ N  E +S        + EV+    +
Sbjct: 239  YQQKDEDNSNVQGHETGDDQSSPVEELHQDELEIENPAEVVSVQQEQAKQQAEVEWSQGD 298

Query: 1044 METKDHQYGQRRDYHN--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHYDQPG 1217
            +E+K+ QY  RR+Y N                                      +YDQPG
Sbjct: 299  VESKE-QYVPRRNYQNTRGGRGGGGSGRRGGYPNGRGGRSGGRVGGSYQNGRSQYYDQPG 357

Query: 1218 GYYPKNYYNTXXXXXXXXXXNAFNNHG-SAQGGHAPADEG 1334
             YY + Y+N           N++NNH    QGGHAP + G
Sbjct: 358  NYYSRGYHNNRGRGGRGAGGNSYNNHVLGIQGGHAPTEVG 397


>gb|EEC75970.1| hypothetical protein OsI_13079 [Oryza sativa Indica Group]
          Length = 466

 Score =  189 bits (481), Expect = 1e-45
 Identities = 98/244 (40%), Positives = 144/244 (59%), Gaps = 10/244 (4%)
 Frame = +2

Query: 38  TTSPPQANYDVSTTTTDGPVMSFMNKRLRALKKKYNKILQIEEASSQGKPINKDQEEVLK 217
           ++S P A    +   TDGP +S ++KRLRAL+KK+N+ILQ+EE+ + G+ +NK+QEEVL+
Sbjct: 9   SSSAPAAAAAAAAEATDGPTLSVVSKRLRALRKKHNRILQMEESLAGGRKLNKEQEEVLR 68

Query: 218 TKPSILTLIDEYEKLRQPLYTVVQEEVFLNNKPXXXXXXXXXXXXXXXXXXXXX------ 379
           +KP+++ LIDE E++R PL   + EE+     P                           
Sbjct: 69  SKPAVVALIDELERMRAPLAAALAEELSSRPAPSSSAAPPPPASSSAAGAADSSVVEDLL 128

Query: 380 ---YFSCLFDVKQQSDFTSTMLTRTHERGCCLTYDYVTXXXXXXXXXXXXXIISLLGGLV 550
              YF  LFD+K Q++F +TM+ R  ER CC+TYDYVT              +S L  L 
Sbjct: 129 ALIYFGTLFDLKPQTEFVATMVARAQERDCCITYDYVTEDAADLLHQSDLDKVSALAALA 188

Query: 551 VSRPVNSI-LSHKNALRSCVEHAKLWLDNSDKAIDDAGEITYKGLRERLEKILASDYFTT 727
            SRP  ++ +SH++AL+SC +HA+LWL  +D+ I     ITY  +R +L+KI+ASDY+T 
Sbjct: 189 ASRPAAAVGVSHRDALQSCAQHARLWLRRADEPIHPESSITYAAVRAKLDKIMASDYYTA 248

Query: 728 SPEM 739
            PEM
Sbjct: 249 QPEM 252


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