BLASTX nr result

ID: Coptis23_contig00000472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000472
         (1551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281520.1| PREDICTED: trafficking protein particle comp...   486   e-135
ref|XP_002281478.1| PREDICTED: trafficking protein particle comp...   486   e-135
emb|CAN78542.1| hypothetical protein VITISV_007618 [Vitis vinifera]   486   e-135
emb|CAN76030.1| hypothetical protein VITISV_029132 [Vitis vinifera]   486   e-135
ref|XP_004143481.1| PREDICTED: trafficking protein particle comp...   474   e-131

>ref|XP_002281520.1| PREDICTED: trafficking protein particle complex subunit 12-like
            [Vitis vinifera]
          Length = 373

 Score =  486 bits (1251), Expect = e-135
 Identities = 244/358 (68%), Positives = 287/358 (80%), Gaps = 1/358 (0%)
 Frame = +2

Query: 95   TDPLTTQFTSLSSLCFDITTLQDLAFKGSWRSILEKIAHARKLSLLTMPHEHLIYLTYNV 274
            +DPL++ F SL+ LC+++++LQ+LA +GSWRSIL+K++ ARKLSLL  PHEHL Y +YNV
Sbjct: 20   SDPLSSPFGSLNDLCYELSSLQELATRGSWRSILDKVSRARKLSLLQKPHEHLCYFSYNV 79

Query: 275  LALTKLRKYLEASEELDTLEDLDSIRYKYESFHDSYPGLSGSMVPFALRWIHAEIPVKLG 454
            LAL KLR+Y + SEEL +LEDLD   Y+YES  D YPG SGSM+PFALRWIHAEIP+KLG
Sbjct: 80   LALIKLRRYGDVSEELASLEDLDHSIYQYESHPDVYPGRSGSMIPFALRWIHAEIPLKLG 139

Query: 455  KRQETLDRLYILLDFVXXXXXXXXXXGLDVCVGQWKKREDFVISSVLSHHLNNKEFGVCX 634
            KRQETLDRLY LLDF           GL V    WK+RE FV++S++ HHL++KEFGVC 
Sbjct: 140  KRQETLDRLYTLLDFARTRVDEKGSRGLGVSADVWKRREVFVVNSIIGHHLSHKEFGVCV 199

Query: 635  XXXXXXXXXXV-DDPVLLSKLGYIQMQVGDLEGSKVSFNRVESLMNKMKEGTGNVVLSEI 811
                        DDP L+SKLG IQ+Q+GDLEG+K SF  VE +  + + G+    LSEI
Sbjct: 200  SLIRQLLSGRCRDDPALVSKLGCIQLQIGDLEGAKASFELVEKMGKEERLGS----LSEI 255

Query: 812  GFKNLVNRNKALIYLVGKDYVSAVREYEECIERDAKDIVAVNNKALCLMYLRDLPDSIKV 991
             FKNLVNRNKAL+YLVGKDYVSAVREYEECIERD  D+VA+NNKALCLMYLRDL DSIKV
Sbjct: 256  EFKNLVNRNKALVYLVGKDYVSAVREYEECIERDGSDVVAINNKALCLMYLRDLSDSIKV 315

Query: 992  LENALERVPTYALNETVVVNLCSMYELAYVNHSEIKKTLSNWIARVAPDDFDSSCTRV 1165
            LENALERVPT ALNET+VVNLCSMYELAYVNHS+IK+TLSNWIARVAPDDFDSSCTR+
Sbjct: 316  LENALERVPTVALNETLVVNLCSMYELAYVNHSDIKRTLSNWIARVAPDDFDSSCTRI 373


>ref|XP_002281478.1| PREDICTED: trafficking protein particle complex subunit 12-like
            [Vitis vinifera]
          Length = 373

 Score =  486 bits (1251), Expect = e-135
 Identities = 244/358 (68%), Positives = 287/358 (80%), Gaps = 1/358 (0%)
 Frame = +2

Query: 95   TDPLTTQFTSLSSLCFDITTLQDLAFKGSWRSILEKIAHARKLSLLTMPHEHLIYLTYNV 274
            +DPL++ F SL+ LC+++++LQ+LA +GSWRSIL+K++ ARKLSLL  PHEHL Y +YNV
Sbjct: 20   SDPLSSPFGSLNDLCYELSSLQELATRGSWRSILDKVSRARKLSLLQKPHEHLCYFSYNV 79

Query: 275  LALTKLRKYLEASEELDTLEDLDSIRYKYESFHDSYPGLSGSMVPFALRWIHAEIPVKLG 454
            LAL KLR+Y + SEEL +LEDLD   Y+YES  D YPG SGSM+PFALRWIHAEIP+KLG
Sbjct: 80   LALIKLRRYGDVSEELASLEDLDHSIYQYESHPDVYPGRSGSMIPFALRWIHAEIPLKLG 139

Query: 455  KRQETLDRLYILLDFVXXXXXXXXXXGLDVCVGQWKKREDFVISSVLSHHLNNKEFGVCX 634
            KRQETLDRLY LLDF           GL V    WK+RE FV++S++ HHL++KEFGVC 
Sbjct: 140  KRQETLDRLYTLLDFARTRVDEKGSRGLGVSADVWKRREVFVVNSIIGHHLSHKEFGVCV 199

Query: 635  XXXXXXXXXXV-DDPVLLSKLGYIQMQVGDLEGSKVSFNRVESLMNKMKEGTGNVVLSEI 811
                        DDP L+SKLG IQ+Q+GDLEG+K SF  VE +  + + G+    LSEI
Sbjct: 200  SLIRQLLSGRCRDDPALVSKLGCIQLQIGDLEGAKASFELVEKMGKEERLGS----LSEI 255

Query: 812  GFKNLVNRNKALIYLVGKDYVSAVREYEECIERDAKDIVAVNNKALCLMYLRDLPDSIKV 991
             FKNLVNRNKAL+YLVGKDYVSAVREYEECIERD  D+VA+NNKALCLMYLRDL DSIKV
Sbjct: 256  EFKNLVNRNKALVYLVGKDYVSAVREYEECIERDGSDVVAINNKALCLMYLRDLSDSIKV 315

Query: 992  LENALERVPTYALNETVVVNLCSMYELAYVNHSEIKKTLSNWIARVAPDDFDSSCTRV 1165
            LENALERVPT ALNET+VVNLCSMYELAYVNHS+IK+TLSNWIARVAPDDFDSSCTR+
Sbjct: 316  LENALERVPTIALNETLVVNLCSMYELAYVNHSDIKRTLSNWIARVAPDDFDSSCTRI 373


>emb|CAN78542.1| hypothetical protein VITISV_007618 [Vitis vinifera]
          Length = 373

 Score =  486 bits (1251), Expect = e-135
 Identities = 244/358 (68%), Positives = 287/358 (80%), Gaps = 1/358 (0%)
 Frame = +2

Query: 95   TDPLTTQFTSLSSLCFDITTLQDLAFKGSWRSILEKIAHARKLSLLTMPHEHLIYLTYNV 274
            +DPL++ F SL+ LC+++++LQ+LA +GSWRSIL+K++ ARKLSLL  PHEHL Y +YNV
Sbjct: 20   SDPLSSPFGSLNDLCYELSSLQELATRGSWRSILDKVSRARKLSLLQKPHEHLCYFSYNV 79

Query: 275  LALTKLRKYLEASEELDTLEDLDSIRYKYESFHDSYPGLSGSMVPFALRWIHAEIPVKLG 454
            LAL KLR+Y + SEEL +LEDLD   Y+YES  D YPG SGSM+PFALRWIHAEIP+KLG
Sbjct: 80   LALXKLRRYGDVSEELASLEDLDHSIYQYESHPDVYPGRSGSMIPFALRWIHAEIPLKLG 139

Query: 455  KRQETLDRLYILLDFVXXXXXXXXXXGLDVCVGQWKKREDFVISSVLSHHLNNKEFGVCX 634
            KRQETLDRLY LLDF           GL V    WK+RE FV++S++ HHL++KEFGVC 
Sbjct: 140  KRQETLDRLYTLLDFARTRVDEKGSRGLGVSADVWKRREVFVVNSIIGHHLSHKEFGVCV 199

Query: 635  XXXXXXXXXXV-DDPVLLSKLGYIQMQVGDLEGSKVSFNRVESLMNKMKEGTGNVVLSEI 811
                        DDP L+SKLG IQ+Q+GDLEG+K SF  VE +  + + G+    LSEI
Sbjct: 200  SLIRQLLSGRCRDDPALVSKLGCIQLQIGDLEGAKASFELVEKMGKEERLGS----LSEI 255

Query: 812  GFKNLVNRNKALIYLVGKDYVSAVREYEECIERDAKDIVAVNNKALCLMYLRDLPDSIKV 991
             FKNLVNRNKAL+YLVGKDYVSAVREYEECIERD  D+VA+NNKALCLMYLRDL DSIKV
Sbjct: 256  EFKNLVNRNKALVYLVGKDYVSAVREYEECIERDGSDVVAINNKALCLMYLRDLSDSIKV 315

Query: 992  LENALERVPTYALNETVVVNLCSMYELAYVNHSEIKKTLSNWIARVAPDDFDSSCTRV 1165
            LENALERVPT ALNET+VVNLCSMYELAYVNHS+IK+TLSNWIARVAPDDFDSSCTR+
Sbjct: 316  LENALERVPTIALNETLVVNLCSMYELAYVNHSDIKRTLSNWIARVAPDDFDSSCTRI 373


>emb|CAN76030.1| hypothetical protein VITISV_029132 [Vitis vinifera]
          Length = 373

 Score =  486 bits (1251), Expect = e-135
 Identities = 244/358 (68%), Positives = 287/358 (80%), Gaps = 1/358 (0%)
 Frame = +2

Query: 95   TDPLTTQFTSLSSLCFDITTLQDLAFKGSWRSILEKIAHARKLSLLTMPHEHLIYLTYNV 274
            +DPL++ F SL+ LC+++++LQ+LA +GSWRSIL+K++ ARKLSLL  PHEHL Y +YNV
Sbjct: 20   SDPLSSPFGSLNDLCYELSSLQELATRGSWRSILDKVSRARKLSLLQKPHEHLCYFSYNV 79

Query: 275  LALTKLRKYLEASEELDTLEDLDSIRYKYESFHDSYPGLSGSMVPFALRWIHAEIPVKLG 454
            LAL KLR+Y + SEEL +LEDLD   Y+YES  D YPG SGSM+PFALRWIHAEIP+KLG
Sbjct: 80   LALIKLRRYGDVSEELASLEDLDHSIYQYESHPDVYPGRSGSMIPFALRWIHAEIPLKLG 139

Query: 455  KRQETLDRLYILLDFVXXXXXXXXXXGLDVCVGQWKKREDFVISSVLSHHLNNKEFGVCX 634
            KRQETLDRLY LLDF           GL V    WK+RE FV++S++ HHL++KEFGVC 
Sbjct: 140  KRQETLDRLYTLLDFARTRVDEKGSRGLGVSADVWKRREVFVVNSIIGHHLSHKEFGVCV 199

Query: 635  XXXXXXXXXXV-DDPVLLSKLGYIQMQVGDLEGSKVSFNRVESLMNKMKEGTGNVVLSEI 811
                        DDP L+SKLG IQ+Q+GDLEG+K SF  VE +  + + G+    LSEI
Sbjct: 200  SLIRQLLSGRCRDDPALVSKLGCIQLQIGDLEGAKASFELVEKMGKEERLGS----LSEI 255

Query: 812  GFKNLVNRNKALIYLVGKDYVSAVREYEECIERDAKDIVAVNNKALCLMYLRDLPDSIKV 991
             FKNLVNRNKAL+YLVGKDYVSAVREYEECIERD  D+VA+NNKALCLMYLRDL DSIKV
Sbjct: 256  EFKNLVNRNKALVYLVGKDYVSAVREYEECIERDGSDVVAINNKALCLMYLRDLSDSIKV 315

Query: 992  LENALERVPTYALNETVVVNLCSMYELAYVNHSEIKKTLSNWIARVAPDDFDSSCTRV 1165
            LENALERVPT ALNET+VVNLCSMYELAYVNHS+IK+TLSNWIARVAPDDFDSSCTR+
Sbjct: 316  LENALERVPTXALNETLVVNLCSMYELAYVNHSDIKRTLSNWIARVAPDDFDSSCTRI 373


>ref|XP_004143481.1| PREDICTED: trafficking protein particle complex subunit 12-like
            [Cucumis sativus]
          Length = 387

 Score =  474 bits (1219), Expect = e-131
 Identities = 243/379 (64%), Positives = 288/379 (75%), Gaps = 11/379 (2%)
 Frame = +2

Query: 62   SSNHATPQP-TIT----------DPLTTQFTSLSSLCFDITTLQDLAFKGSWRSILEKIA 208
            S +H+T  P T+T          DPLTTQF SL+ L  D+ +LQDLA +GSWRSIL+K+A
Sbjct: 12   SHSHSTSDPETLTTGFENLAISSDPLTTQFGSLNDLAHDLFSLQDLATRGSWRSILDKVA 71

Query: 209  HARKLSLLTMPHEHLIYLTYNVLALTKLRKYLEASEELDTLEDLDSIRYKYESFHDSYPG 388
             AR L+LL  PH+HL YL+YNVLAL KLR++ EA  ELD+LEDL+S +Y+YES+   YP 
Sbjct: 72   RARALTLLQKPHDHLTYLSYNVLALVKLRRFAEALAELDSLEDLNSSQYRYESYPSVYPN 131

Query: 389  LSGSMVPFALRWIHAEIPVKLGKRQETLDRLYILLDFVXXXXXXXXXXGLDVCVGQWKKR 568
             +GSMVPF+LRW+ A IP+K+G+RQ  LDR Y LLDFV           LDV V  WKKR
Sbjct: 132  RTGSMVPFSLRWLQALIPIKMGERQHGLDRFYELLDFVQSKLKDKEEKKLDVSVNLWKKR 191

Query: 569  EDFVISSVLSHHLNNKEFGVCXXXXXXXXXXXVDDPVLLSKLGYIQMQVGDLEGSKVSFN 748
              FVI+ ++ HHL+NKEFGVC             DP L+SKLGYIQM  GD+EG+K SFN
Sbjct: 192  VVFVINCIIGHHLSNKEFGVCLTLINNLLSEDFSDPALISKLGYIQMHAGDIEGAKRSFN 251

Query: 749  RVESLMNKMKEGTGNVVLSEIGFKNLVNRNKALIYLVGKDYVSAVREYEECIERDAKDIV 928
            R+E L   +KEG  +  LSE+  KNLVNRNKAL++LVGKDY+SAVREYEECIERD  D+V
Sbjct: 252  RIEEL---VKEGKSSGSLSEVEMKNLVNRNKALVFLVGKDYLSAVREYEECIERDNSDMV 308

Query: 929  AVNNKALCLMYLRDLPDSIKVLENALERVPTYALNETVVVNLCSMYELAYVNHSEIKKTL 1108
            A+NNKALCLMYLRDL DSIKVLENALERVPT ALNETV+VNLCSMYELAYVNHSEIK+TL
Sbjct: 309  AINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSEIKRTL 368

Query: 1109 SNWIARVAPDDFDSSCTRV 1165
            +NWIARVAPDDFDSS TR+
Sbjct: 369  NNWIARVAPDDFDSSSTRI 387


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