BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000450
         (1122 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264357.1| PREDICTED: high mobility group B protein 10 ...   304   3e-80
ref|XP_002531766.1| transcription factor, putative [Ricinus comm...   301   1e-79
ref|XP_002330570.1| high mobility group family [Populus trichoca...   287   3e-75
ref|XP_003536791.1| PREDICTED: high mobility group B protein 15-...   287   4e-75
ref|XP_003555635.1| PREDICTED: high mobility group B protein 15-...   283   7e-74

>ref|XP_002264357.1| PREDICTED: high mobility group B protein 10 [Vitis vinifera]
            gi|296090037|emb|CBI39856.3| unnamed protein product
            [Vitis vinifera]
          Length = 331

 Score =  304 bits (778), Expect = 3e-80
 Identities = 158/286 (55%), Positives = 199/286 (69%), Gaps = 10/286 (3%)
 Frame = -3

Query: 1006 YEQVVQNGQLFMDTVQDLHKSQGSKFMVPIMGGKALDLHRLFVEVTARGGLEKVIRDRQW 827
            Y++VVQ+  LF  T++D H+S G+KFMVP  GGKALDLHRLFVEVT+RGGLEKVIRDR+W
Sbjct: 47   YQEVVQSADLFWQTLKDFHRSFGTKFMVPTTGGKALDLHRLFVEVTSRGGLEKVIRDRKW 106

Query: 826  KEIIAVFNFPSTITNASFVLRKYYINLLHHYEQVYYFRKQGPPSVQLQ---------AAT 674
            KE+  VF FP+TIT+ASFVLRKYY++LLHHYEQVYYFRKQ  P              +AT
Sbjct: 107  KEVTTVFKFPTTITSASFVLRKYYLSLLHHYEQVYYFRKQSFPISMADPLNSSPINGSAT 166

Query: 673  PPCEEKNSNAPQLPENSELWTGRWVTGAIDGKFDNGYLVTVSFGSEKLKGVLYHAPVEPQ 494
             P  + ++    LP +  L  G  VTG IDGKFDNGYLV+V+ GS+ LKGVLYH P    
Sbjct: 167  TPVFQDSATTNDLPVSPRLQPGCLVTGTIDGKFDNGYLVSVNLGSDVLKGVLYHIPNNES 226

Query: 493  KLG-NAIXXXXXXXXXXXXXXXXXRDPFHPKPNRSGYNFFYSEHYARLKSLHHGQEKTLS 317
             +  ++                  RDP  PK ++SGYNFF++E+YARLK L+ GQE+ +S
Sbjct: 227  HMSRSSNASAVPPPRNWKRSQLALRDPSRPKRSQSGYNFFFAENYARLKPLYSGQERAIS 286

Query: 316  TKISHLWSKLTEGEKQVYQEKGAIDKQRYEHEMTEYRKSSSGAKPK 179
             KI  LW++LT+ EKQVYQEKG IDK+RY+ EM EYR S+  +KP+
Sbjct: 287  KKIGFLWNRLTDAEKQVYQEKGMIDKERYKTEMLEYR-SAYDSKPQ 331


>ref|XP_002531766.1| transcription factor, putative [Ricinus communis]
            gi|223528602|gb|EEF30622.1| transcription factor,
            putative [Ricinus communis]
          Length = 313

 Score =  301 bits (772), Expect = 1e-79
 Identities = 153/274 (55%), Positives = 189/274 (68%), Gaps = 5/274 (1%)
 Frame = -3

Query: 1006 YEQVVQNGQLFMDTVQDLHKSQGSKFMVPIMGGKALDLHRLFVEVTARGGLEKVIRDRQW 827
            +E VVQ+  LF + ++  HKS G+KFMVP +GGKALDLH LFVEVT+RGGLEKV+RDR+W
Sbjct: 37   FEDVVQSSDLFWEKLKSFHKSFGTKFMVPTVGGKALDLHHLFVEVTSRGGLEKVVRDRKW 96

Query: 826  KEIIAVFNFPSTITNASFVLRKYYINLLHHYEQVYYFRKQGP-----PSVQLQAATPPCE 662
            KE+IA FNFPSTIT+ASFVLRKYY++LL+H+EQVY F KQ P       V          
Sbjct: 97   KEVIAAFNFPSTITSASFVLRKYYLSLLYHFEQVYQFHKQVPSVSVSDDVNGNLVNGSAT 156

Query: 661  EKNSNAPQLPENSELWTGRWVTGAIDGKFDNGYLVTVSFGSEKLKGVLYHAPVEPQKLGN 482
             +     Q P +S+L  G  V G IDGKFDNGYL+TV+ GSE+LKGVLYH P E     +
Sbjct: 157  VEGVTVNQFPGSSQLQLGSSVNGTIDGKFDNGYLITVTLGSEQLKGVLYHIPNEFYMSQS 216

Query: 481  AIXXXXXXXXXXXXXXXXXRDPFHPKPNRSGYNFFYSEHYARLKSLHHGQEKTLSTKISH 302
            +                  RDP  PK +RSGYNFF++EHYA+LK LH+GQEK +S KI  
Sbjct: 217  SHNSDLPPRRHRKRSRLLLRDPSRPKSHRSGYNFFFAEHYAQLKPLHYGQEKVISKKIGL 276

Query: 301  LWSKLTEGEKQVYQEKGAIDKQRYEHEMTEYRKS 200
            LW+ LTE EK++YQEKG  DK+RY++EM EYR S
Sbjct: 277  LWNNLTEAEKEIYQEKGLKDKERYKNEMLEYRSS 310


>ref|XP_002330570.1| high mobility group family [Populus trichocarpa]
            gi|222872128|gb|EEF09259.1| high mobility group family
            [Populus trichocarpa]
          Length = 316

 Score =  287 bits (735), Expect = 3e-75
 Identities = 147/276 (53%), Positives = 186/276 (67%), Gaps = 7/276 (2%)
 Frame = -3

Query: 1006 YEQVVQNGQLFMDTVQDLHKSQGSKFMVPIMGGKALDLHRLFVEVTARGGLEKVIRDRQW 827
            YE + Q+  LF + ++  H+S G+KFMVP +GGKALDLH LFVEVT+RGG+EKVI DR+W
Sbjct: 38   YEDIAQSSDLFWEKLKAFHQSFGTKFMVPTVGGKALDLHHLFVEVTSRGGIEKVITDRKW 97

Query: 826  KEIIAVFNFPSTITNASFVLRKYYINLLHHYEQVYYFRKQGPPSVQLQAAT-------PP 668
            KE+I  FNFP+TIT+ASFVLRK+Y++LL+H+EQVY+F KQ P      A           
Sbjct: 98   KEVITAFNFPTTITSASFVLRKHYLSLLYHFEQVYHFNKQIPLVSGTDAMNGRSLVNGSA 157

Query: 667  CEEKNSNAPQLPENSELWTGRWVTGAIDGKFDNGYLVTVSFGSEKLKGVLYHAPVEPQKL 488
              E+ +   Q   + +L  G  V+G IDGKFDNGYLVTV+ G+ +LKGVLYH P    + 
Sbjct: 158  TLEEGAITNQFSSSQQLQIGCSVSGIIDGKFDNGYLVTVNLGTNQLKGVLYHIPHTFHES 217

Query: 487  GNAIXXXXXXXXXXXXXXXXXRDPFHPKPNRSGYNFFYSEHYARLKSLHHGQEKTLSTKI 308
             ++                  RDP  PK NRSGYNFF++EHYA+LK LHHGQEK +S KI
Sbjct: 218  QDSRSSDLPPRRRRKRSRLALRDPSQPKSNRSGYNFFFTEHYAQLKPLHHGQEKVISKKI 277

Query: 307  SHLWSKLTEGEKQVYQEKGAIDKQRYEHEMTEYRKS 200
              LW+ LTE EKQVYQEKG  DK++Y +EM EYR S
Sbjct: 278  GLLWNNLTEAEKQVYQEKGLRDKEKYRNEMLEYRSS 313


>ref|XP_003536791.1| PREDICTED: high mobility group B protein 15-like [Glycine max]
          Length = 425

 Score =  287 bits (734), Expect = 4e-75
 Identities = 154/308 (50%), Positives = 198/308 (64%), Gaps = 35/308 (11%)
 Frame = -3

Query: 1021 YSLTSYEQVVQNGQLFMDTVQDLHKSQGSKFMVPIMGGKALDLHRLFVEVTARGGLEKVI 842
            +SL  YE+VV N QLFM T++ LH + G+KFM+PI+GG+ LDLHRLFVEVT+RGG+ K+I
Sbjct: 27   FSLAKYEEVVDNPQLFMFTLEKLHAAMGTKFMIPIVGGRELDLHRLFVEVTSRGGIAKII 86

Query: 841  RDRQWKEIIAVFNFPSTITNASFVLRKYYINLLHHYEQVYYFRKQ-----GPPSVQLQAA 677
            R+R+WK++ +VFNFPST TNASFVLRKYY +LL+HYEQ+Y+F+ +      P ++Q Q+ 
Sbjct: 87   RERKWKDVTSVFNFPSTATNASFVLRKYYASLLYHYEQIYFFKAREWDPTAPDALQNQST 146

Query: 676  TP------------------PCEEKNSNAPQLPE-NSELWTGRWVTGAIDGKFDNGYLVT 554
             P                    ++ N NA +LPE  +    G  V G IDGKF++GYLVT
Sbjct: 147  LPVPPPKMQFPQPLSEIQPAVFQQSNINAAKLPEAMAASSAGSPVIGVIDGKFESGYLVT 206

Query: 553  VSFGSEKLKGVLYHAPVEP----------QKLGNA-IXXXXXXXXXXXXXXXXXRDPFHP 407
            V+ GSEKLKGVLY AP  P           K  NA                   RDP HP
Sbjct: 207  VTIGSEKLKGVLYQAPQNPVLVASHHSASAKNNNASASLGVHRRRRRKKSEIKRRDPAHP 266

Query: 406  KPNRSGYNFFYSEHYARLKSLHHGQEKTLSTKISHLWSKLTEGEKQVYQEKGAIDKQRYE 227
            KPNRSGYNFF++E +ARLK LHHG+++ +S  I  LW+KL E EK VYQEK   DK+RY 
Sbjct: 267  KPNRSGYNFFFAEQHARLKLLHHGKDREISRMIGELWNKLKESEKTVYQEKAMKDKERYR 326

Query: 226  HEMTEYRK 203
             EM +YR+
Sbjct: 327  AEMEDYRE 334


>ref|XP_003555635.1| PREDICTED: high mobility group B protein 15-like [Glycine max]
          Length = 419

 Score =  283 bits (723), Expect = 7e-74
 Identities = 151/306 (49%), Positives = 196/306 (64%), Gaps = 35/306 (11%)
 Frame = -3

Query: 1015 LTSYEQVVQNGQLFMDTVQDLHKSQGSKFMVPIMGGKALDLHRLFVEVTARGGLEKVIRD 836
            L  YE+VV N QLFM T++ LH + G+KFM+PI+GG+ LDLHRLFVEV++RGG+ K+IR+
Sbjct: 28   LAKYEEVVDNPQLFMFTLEKLHAAMGTKFMIPIVGGRELDLHRLFVEVSSRGGIAKIIRE 87

Query: 835  RQWKEIIAVFNFPSTITNASFVLRKYYINLLHHYEQVYYFRKQ----------------- 707
            R+WK++ +VFNFPST TNASFVLRKYY++LL+HYEQ+Y+F+ +                 
Sbjct: 88   RKWKDVTSVFNFPSTATNASFVLRKYYVSLLYHYEQIYFFKAREWDPIAPDVSQNQSTLP 147

Query: 706  -GPPSVQLQ---AATPPC--EEKNSNAPQLPE-NSELWTGRWVTGAIDGKFDNGYLVTVS 548
              PP +Q Q   + T P   +  N NA +LPE  +    G  V G IDGKF++GYLVTV+
Sbjct: 148  VPPPKMQFQQPLSETQPAVFQLSNVNAAKLPEAMAASSAGSPVIGVIDGKFESGYLVTVT 207

Query: 547  FGSEKLKGVLYHAPVEPQKLGN-----------AIXXXXXXXXXXXXXXXXXRDPFHPKP 401
             GSEKLKGVLY AP  P    +           +                  RDP HPKP
Sbjct: 208  IGSEKLKGVLYQAPQNPVLTASHHSASANNNNASASLGVHRRRRRKKSEIKRRDPAHPKP 267

Query: 400  NRSGYNFFYSEHYARLKSLHHGQEKTLSTKISHLWSKLTEGEKQVYQEKGAIDKQRYEHE 221
            NRSGYNFF++E +ARLK LHHG+++ +S  I  LW+KL E EK VYQEK   DK+RY  E
Sbjct: 268  NRSGYNFFFAEQHARLKLLHHGKDREISRMIGELWNKLKESEKTVYQEKAMKDKERYRVE 327

Query: 220  MTEYRK 203
            M +YR+
Sbjct: 328  MEDYRE 333