BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000438
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518273.1| PREDICTED: shikimate kinase, chloroplastic [...    81   1e-13
ref|NP_001239733.1| uncharacterized protein LOC100781076 [Glycin...    81   1e-13
ref|XP_002512880.1| protein with unknown function [Ricinus commu...    79   6e-13
gb|ACU15950.1| unknown [Glycine max]                                   77   2e-12
ref|XP_002273840.1| PREDICTED: shikimate kinase, chloroplastic [...    77   2e-12

>ref|XP_003518273.1| PREDICTED: shikimate kinase, chloroplastic [Glycine max]
          Length = 280

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 49/104 (47%), Positives = 58/104 (55%), Gaps = 24/104 (23%)
 Frame = +3

Query: 321 ILMQNKVVEISSQLKGTSIFLXXXXXXXXXXXXKQ------------------------A 428
           + ++ K  E+SS+LKGTSIFL            K                         A
Sbjct: 65  LAVKKKAAEVSSELKGTSIFLVGLKSSLKTSLGKLLADALRYYYFDSDSLVEEAVGGALA 124

Query: 429 AKSFREKDDKGFLESETEVLRQLSSMGCLVICAGDGAVKSSTNL 560
           AKSFRE D+KGF ESETEVL+QLSSMG LV+CAG+G V SSTNL
Sbjct: 125 AKSFRESDEKGFYESETEVLKQLSSMGRLVVCAGNGTVTSSTNL 168


>ref|NP_001239733.1| uncharacterized protein LOC100781076 [Glycine max]
           gi|255640183|gb|ACU20382.1| unknown [Glycine max]
          Length = 289

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 49/104 (47%), Positives = 58/104 (55%), Gaps = 24/104 (23%)
 Frame = +3

Query: 321 ILMQNKVVEISSQLKGTSIFLXXXXXXXXXXXXKQ------------------------A 428
           + ++ K  E+SS+LKGTSIFL            K                         A
Sbjct: 76  LAVKKKAAEVSSELKGTSIFLVGLKSSFKTSLGKLLADALRYYYFDSDNLVEEAVGGALA 135

Query: 429 AKSFREKDDKGFLESETEVLRQLSSMGCLVICAGDGAVKSSTNL 560
           AKSFRE D+KGF E ETEVL+QLSSMG LV+CAG+GAV SSTNL
Sbjct: 136 AKSFRESDEKGFYECETEVLKQLSSMGRLVVCAGNGAVTSSTNL 179


>ref|XP_002512880.1| protein with unknown function [Ricinus communis]
           gi|223547891|gb|EEF49383.1| protein with unknown
           function [Ricinus communis]
          Length = 292

 Score = 78.6 bits (192), Expect = 6e-13
 Identities = 47/104 (45%), Positives = 58/104 (55%), Gaps = 24/104 (23%)
 Frame = +3

Query: 321 ILMQNKVVEISSQLKGTSIFLXXXXXXXXXXXXK------------------------QA 428
           + ++ +  +IS +LKGTSIFL            K                         A
Sbjct: 84  LALKKRAADISPELKGTSIFLVGMRSSMKTSLGKLLADSLRYYYFDSDSLVEEVASGASA 143

Query: 429 AKSFREKDDKGFLESETEVLRQLSSMGCLVICAGDGAVKSSTNL 560
           AKSF+E D+KGF ESETEVL+QLSSMG LV+CAGDGAV+S TNL
Sbjct: 144 AKSFKETDEKGFRESETEVLKQLSSMGRLVVCAGDGAVQSFTNL 187


>gb|ACU15950.1| unknown [Glycine max]
          Length = 230

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 48/103 (46%), Positives = 54/103 (52%), Gaps = 24/103 (23%)
 Frame = +3

Query: 324 LMQNKVVEISSQLKGTSIFLXXXXXXXXXXXXK------------------------QAA 431
           L   K  E+SS+LKGTSIFL            K                          A
Sbjct: 65  LAVKKAAEVSSELKGTSIFLVGLKSSLKTSLGKLLADALRYYYFDSDSLVEEAVGGALVA 124

Query: 432 KSFREKDDKGFLESETEVLRQLSSMGCLVICAGDGAVKSSTNL 560
           KSFRE D+KGF ESETEVL+QLS MG LV+CAG+G V SSTNL
Sbjct: 125 KSFRESDEKGFYESETEVLKQLSPMGRLVVCAGNGTVTSSTNL 167


>ref|XP_002273840.1| PREDICTED: shikimate kinase, chloroplastic [Vitis vinifera]
           gi|296082301|emb|CBI21306.3| unnamed protein product
           [Vitis vinifera]
          Length = 305

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 47/104 (45%), Positives = 58/104 (55%), Gaps = 24/104 (23%)
 Frame = +3

Query: 321 ILMQNKVVEISSQLKGTSIFLXXXXXXXXXXXXK------------------------QA 428
           + ++ K +EIS  LKGTSIFL            K                         A
Sbjct: 85  LAVKKKAMEISPVLKGTSIFLVGMNSTIKTNVGKLLADALRYYHFDSDSLVEEACGGESA 144

Query: 429 AKSFREKDDKGFLESETEVLRQLSSMGCLVICAGDGAVKSSTNL 560
           AKS +E+D+KGF +SETEVL+QLSSMG LV+CAGDG V+SSTNL
Sbjct: 145 AKSLKEQDEKGFHDSETEVLKQLSSMGRLVVCAGDGLVQSSTNL 188