BLASTX nr result

ID: Coptis23_contig00000424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000424
         (2783 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518283.1| UDP-glucuronic acid/UDP-N-acetylgalactosamin...   504   e-140
ref|XP_002267594.1| PREDICTED: uncharacterized membrane protein ...   491   e-136
ref|XP_002892363.1| hypothetical protein ARALYDRAFT_470711 [Arab...   489   e-135
ref|NP_172172.2| nodulin MtN21 /EamA-like transporter protein [A...   489   e-135
gb|ABK93414.1| unknown [Populus trichocarpa] gi|118489025|gb|ABK...   489   e-135

>ref|XP_002518283.1| UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter, putative
            [Ricinus communis] gi|223542503|gb|EEF44043.1|
            UDP-glucuronic acid/UDP-N-acetylgalactosamine
            transporter, putative [Ricinus communis]
          Length = 369

 Score =  504 bits (1298), Expect = e-140
 Identities = 265/365 (72%), Positives = 283/365 (77%)
 Frame = +2

Query: 1232 DLI*TRGIKDPTKMSEGAKFQLGTVGAXXXXXXXXXXXXXCNKALITTLGFHFATTLTSW 1411
            D I  R  K   KMSE  +FQLGTVGA             CNKALI+TLGF FATTLTSW
Sbjct: 5    DRIEKRKRKKRKKMSESQRFQLGTVGALSLSVVSSVSIVICNKALISTLGFTFATTLTSW 64

Query: 1412 HLLVTFCSLHGALKMKLFEHKPFDARAVMXXXXXXXXXXXXXXXXXXXXXVGFYQMTKLA 1591
            HLLVTFCSLH AL MK+FEHKPFDARAVM                     VGFYQMTKLA
Sbjct: 65   HLLVTFCSLHVALWMKMFEHKPFDARAVMGFGILNGISIGLLNLSLGFNSVGFYQMTKLA 124

Query: 1592 IIPCTVLLETLFFRKQFSRTIQFSLSILLLGVGIATVTDXXXXXXXXXXXXXXXXTTCVA 1771
            IIPCTVLLETLFFRK+FSR IQFSL+ILLLGVGIATVTD                TTC+A
Sbjct: 125  IIPCTVLLETLFFRKKFSRNIQFSLTILLLGVGIATVTDLQLNVLGSVLSLLAVVTTCIA 184

Query: 1772 QIMTNTIQKRFKVSSTQLLYQSCPYQAMTLFIIGPFLDLLLTNQNVLFFKYTPQVLVFIV 1951
            QIMTNTIQK+FKVSSTQLLYQSCPYQA+TLFIIGPFLD LLTN NV  FKYTPQVL FIV
Sbjct: 185  QIMTNTIQKKFKVSSTQLLYQSCPYQAITLFIIGPFLDGLLTNLNVFAFKYTPQVLFFIV 244

Query: 1952 LSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLGFGYILLRDPFNWRNILGILIAL 2131
            LSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVL FGY+LLRDPF+WRNILGILIA+
Sbjct: 245  LSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLRDPFSWRNILGILIAV 304

Query: 2132 VGMVLYSYFCTVESQQKASEASPQLSQAKESESDPLISIENGSGVANDGVDAKAPVWNSD 2311
            +GMVLYSY CTVE+QQKASE S +L + KE ESDPLI +ENGSG+  DGV  KAPVWNS+
Sbjct: 305  IGMVLYSYCCTVENQQKASETSVKLPEVKEGESDPLIGVENGSGILADGVVPKAPVWNSN 364

Query: 2312 KDLRA 2326
            KDL A
Sbjct: 365  KDLHA 369


>ref|XP_002267594.1| PREDICTED: uncharacterized membrane protein At1g06890 [Vitis
            vinifera] gi|297745769|emb|CBI15825.3| unnamed protein
            product [Vitis vinifera]
          Length = 352

 Score =  491 bits (1263), Expect = e-136
 Identities = 253/352 (71%), Positives = 274/352 (77%)
 Frame = +2

Query: 1271 MSEGAKFQLGTVGAXXXXXXXXXXXXXCNKALITTLGFHFATTLTSWHLLVTFCSLHGAL 1450
            M E  +FQLGTVGA             CNKALI++LGF FATTLTSWHLLVTFCSLH AL
Sbjct: 1    MGESQRFQLGTVGALSLSVVSSVSIVICNKALISSLGFSFATTLTSWHLLVTFCSLHVAL 60

Query: 1451 KMKLFEHKPFDARAVMXXXXXXXXXXXXXXXXXXXXXVGFYQMTKLAIIPCTVLLETLFF 1630
             MKLFEHKPFDARAVM                     VGFYQMTKLAIIPCTVLLETLFF
Sbjct: 61   WMKLFEHKPFDARAVMGFGILNGTSIGLLNLSLGFNSVGFYQMTKLAIIPCTVLLETLFF 120

Query: 1631 RKQFSRTIQFSLSILLLGVGIATVTDXXXXXXXXXXXXXXXXTTCVAQIMTNTIQKRFKV 1810
            RK+FSR+IQ SLSILLLGVGIATVTD                TTC+AQIMTN IQK+FKV
Sbjct: 121  RKRFSRSIQLSLSILLLGVGIATVTDLQLNALGSVLSLLAVITTCIAQIMTNNIQKKFKV 180

Query: 1811 SSTQLLYQSCPYQAMTLFIIGPFLDLLLTNQNVLFFKYTPQVLVFIVLSCLISVSVNFST 1990
            SSTQLLYQSCPYQAMTLFI GPFLD LLT QNV  FKYT +VLVFIVLSCLISVSVNFST
Sbjct: 181  SSTQLLYQSCPYQAMTLFIAGPFLDWLLTKQNVFAFKYTSEVLVFIVLSCLISVSVNFST 240

Query: 1991 FLVIGKTSPVTYQVLGHLKTCLVLGFGYILLRDPFNWRNILGILIALVGMVLYSYFCTVE 2170
            FLVIGKTSPVTYQVLGHLKTCLVL FGY+LL DPF+WRNILGILIAL+GMVLYSY+C+ E
Sbjct: 241  FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIALIGMVLYSYYCSRE 300

Query: 2171 SQQKASEASPQLSQAKESESDPLISIENGSGVANDGVDAKAPVWNSDKDLRA 2326
             QQK SE S Q++QAKESE+DPLI +ENG+G+  D V AK P WNS+KDL+A
Sbjct: 301  GQQKPSEVSAQMAQAKESETDPLIGVENGAGILTDAVVAKVPAWNSNKDLQA 352


>ref|XP_002892363.1| hypothetical protein ARALYDRAFT_470711 [Arabidopsis lyrata subsp.
            lyrata] gi|297338205|gb|EFH68622.1| hypothetical protein
            ARALYDRAFT_470711 [Arabidopsis lyrata subsp. lyrata]
          Length = 357

 Score =  489 bits (1260), Expect = e-135
 Identities = 256/357 (71%), Positives = 280/357 (78%), Gaps = 5/357 (1%)
 Frame = +2

Query: 1271 MSEGAKFQLGTVGAXXXXXXXXXXXXXCNKALITTLGFHFATTLTSWHLLVTFCSLHGAL 1450
            MSEG KFQLGT+GA             CNKALI+TLGF FATTLTSWHLLVTFCSLH AL
Sbjct: 1    MSEGQKFQLGTIGALSLSVVSSVSIVICNKALISTLGFTFATTLTSWHLLVTFCSLHVAL 60

Query: 1451 KMKLFEHKPFDARAVMXXXXXXXXXXXXXXXXXXXXXVGFYQMTKLAIIPCTVLLETLFF 1630
             MK+FEHKPFD RAVM                     VGFYQMTKLAIIPCTVLLETLFF
Sbjct: 61   WMKMFEHKPFDPRAVMGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVLLETLFF 120

Query: 1631 RKQFSRTIQFSLSILLLGVGIATVTDXXXXXXXXXXXXXXXXTTCVAQIMTNTIQKRFKV 1810
            RK+FSR IQFSL+ILLLGVGIATVTD                TTCVAQIMTNTIQK+FKV
Sbjct: 121  RKKFSRKIQFSLTILLLGVGIATVTDLQLNMLGSVLSLLAVVTTCVAQIMTNTIQKKFKV 180

Query: 1811 SSTQLLYQSCPYQAMTLFIIGPFLDLLLTNQNVLFFKYTPQVLVFIVLSCLISVSVNFST 1990
            SSTQLLYQSCPYQA+TLF+ GPFLD LLTNQNV  FKYT QV+ FIVLSCLISVSVNFST
Sbjct: 181  SSTQLLYQSCPYQAITLFVTGPFLDGLLTNQNVFAFKYTSQVVFFIVLSCLISVSVNFST 240

Query: 1991 FLVIGKTSPVTYQVLGHLKTCLVLGFGYILLRDPFNWRNILGILIALVGMVLYSYFCTVE 2170
            FLVIGKTSPVTYQVLGHLKTCLVL FGY+LLRDPF+WRNILGIL+A++GMV+YSY+C++E
Sbjct: 241  FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLRDPFDWRNILGILVAVIGMVVYSYYCSIE 300

Query: 2171 SQQKASEASPQLSQAKESESDPLISIENGSGVAND---GVDAK--APVWNSDKDLRA 2326
            +QQKASE S QL Q KESE+DPLI+ ENGSGV +D   GV  K  APVWNS+KD +A
Sbjct: 301  TQQKASETSTQLPQMKESENDPLIAAENGSGVLSDGGGGVQQKTVAPVWNSNKDFQA 357


>ref|NP_172172.2| nodulin MtN21 /EamA-like transporter protein [Arabidopsis thaliana]
            gi|145323764|ref|NP_001077471.1| nodulin MtN21 /EamA-like
            transporter protein [Arabidopsis thaliana]
            gi|75158873|sp|Q8RXL8.1|Y1689_ARATH RecName:
            Full=Uncharacterized membrane protein At1g06890
            gi|19423946|gb|AAL87295.1| unknown protein [Arabidopsis
            thaliana] gi|21436373|gb|AAM51356.1| unknown protein
            [Arabidopsis thaliana] gi|332189927|gb|AEE28048.1|
            nodulin MtN21 /EamA-like transporter protein [Arabidopsis
            thaliana] gi|332189928|gb|AEE28049.1| nodulin MtN21
            /EamA-like transporter protein [Arabidopsis thaliana]
          Length = 357

 Score =  489 bits (1259), Expect = e-135
 Identities = 256/357 (71%), Positives = 279/357 (78%), Gaps = 5/357 (1%)
 Frame = +2

Query: 1271 MSEGAKFQLGTVGAXXXXXXXXXXXXXCNKALITTLGFHFATTLTSWHLLVTFCSLHGAL 1450
            MSEG KFQLGT+GA             CNKALI+TLGF FATTLTSWHLLVTFCSLH AL
Sbjct: 1    MSEGQKFQLGTIGALSLSVVSSVSIVICNKALISTLGFTFATTLTSWHLLVTFCSLHVAL 60

Query: 1451 KMKLFEHKPFDARAVMXXXXXXXXXXXXXXXXXXXXXVGFYQMTKLAIIPCTVLLETLFF 1630
             MK+FEHKPFD RAVM                     VGFYQMTKLAIIPCTVLLETLFF
Sbjct: 61   WMKMFEHKPFDPRAVMGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVLLETLFF 120

Query: 1631 RKQFSRTIQFSLSILLLGVGIATVTDXXXXXXXXXXXXXXXXTTCVAQIMTNTIQKRFKV 1810
            RK+FSR IQFSL+ILLLGVGIATVTD                TTCVAQIMTNTIQK+FKV
Sbjct: 121  RKKFSRKIQFSLTILLLGVGIATVTDLQLNMLGSVLSLLAVVTTCVAQIMTNTIQKKFKV 180

Query: 1811 SSTQLLYQSCPYQAMTLFIIGPFLDLLLTNQNVLFFKYTPQVLVFIVLSCLISVSVNFST 1990
            SSTQLLYQSCPYQA+TLF+ GPFLD LLTNQNV  FKYT QV+ FIVLSCLISVSVNFST
Sbjct: 181  SSTQLLYQSCPYQAITLFVTGPFLDGLLTNQNVFAFKYTSQVVFFIVLSCLISVSVNFST 240

Query: 1991 FLVIGKTSPVTYQVLGHLKTCLVLGFGYILLRDPFNWRNILGILIALVGMVLYSYFCTVE 2170
            FLVIGKTSPVTYQVLGHLKTCLVL FGY+LLRDPF+WRNILGIL+A++GMV+YSY+C++E
Sbjct: 241  FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLRDPFDWRNILGILVAVIGMVVYSYYCSIE 300

Query: 2171 SQQKASEASPQLSQAKESESDPLISIENGSGVAND---GVDAK--APVWNSDKDLRA 2326
            +QQKASE S QL Q KESE DPLI+ ENGSGV +D   GV  K  APVWNS+KD +A
Sbjct: 301  TQQKASETSTQLPQMKESEKDPLIAAENGSGVLSDGGGGVQQKTVAPVWNSNKDFQA 357


>gb|ABK93414.1| unknown [Populus trichocarpa] gi|118489025|gb|ABK96320.1| unknown
            [Populus trichocarpa x Populus deltoides]
          Length = 353

 Score =  489 bits (1258), Expect = e-135
 Identities = 256/353 (72%), Positives = 279/353 (79%), Gaps = 1/353 (0%)
 Frame = +2

Query: 1271 MSEGAKFQLGTVGAXXXXXXXXXXXXXCNKALITTLGFHFATTLTSWHLLVTFCSLHGAL 1450
            MSEG KFQLGTVGA             CNKALI+TLGF FATTLTSWHLLVTFCSLH AL
Sbjct: 1    MSEGQKFQLGTVGALSLSVVSSVSIVICNKALISTLGFTFATTLTSWHLLVTFCSLHMAL 60

Query: 1451 KMKLFEHKPFDARAVMXXXXXXXXXXXXXXXXXXXXXVGFYQMTKLAIIPCTVLLETLFF 1630
             MKLFEHKPFDARAVM                     VGFYQMTKLAIIPCTVLLETLFF
Sbjct: 61   WMKLFEHKPFDARAVMGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVLLETLFF 120

Query: 1631 RKQFSRTIQFSLSILLLGVGIATVTDXXXXXXXXXXXXXXXXTTCVAQIMTNTIQKRFKV 1810
            RKQFSR+IQ SL+ILL+GVGIATVTD                TTCVAQIMTNTIQK+F+V
Sbjct: 121  RKQFSRSIQLSLTILLMGVGIATVTDLQLNVLGSILSLLAVLTTCVAQIMTNTIQKKFRV 180

Query: 1811 SSTQLLYQSCPYQAMTLFIIGPFLDLLLTNQNVLFFKYTPQVLVFIVLSCLISVSVNFST 1990
            SSTQLLYQSCPYQA+TLFI+GPFLD LLTN+NVL FKYTP VL FIVLSCLISVSVNFST
Sbjct: 181  SSTQLLYQSCPYQALTLFIVGPFLDGLLTNKNVLAFKYTPLVLFFIVLSCLISVSVNFST 240

Query: 1991 FLVIGKTSPVTYQVLGHLKTCLVLGFGYILLRDPFNWRNILGILIALVGMVLYSYFCTVE 2170
            FLVIGKTSPVTYQVLGHLKTCLVL FGY+LLRDPF+WRNILGILIA+VGMVLYSY CT+E
Sbjct: 241  FLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLRDPFSWRNILGILIAVVGMVLYSYCCTLE 300

Query: 2171 SQQKASEASPQLSQAKESESDPLISIENGSGV-ANDGVDAKAPVWNSDKDLRA 2326
            +QQK +EA  +L + KESE+DPLIS ENG+G+ A+ GV    P+WNS+KDL A
Sbjct: 301  NQQKQNEAPAKLPEVKESETDPLISAENGTGILADGGVPKVVPLWNSNKDLDA 353


Top