BLASTX nr result

ID: Coptis23_contig00000423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000423
         (1446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267414.1| PREDICTED: thiazole biosynthetic enzyme, chl...   537   e-150
gb|AFM35683.1| thiamin biosynthetic protein [Vitis pseudoreticul...   534   e-149
ref|XP_002317206.1| predicted protein [Populus trichocarpa] gi|2...   534   e-149
ref|XP_002305603.1| predicted protein [Populus trichocarpa] gi|1...   533   e-149
gb|ABK94930.1| unknown [Populus trichocarpa]                          530   e-148

>ref|XP_002267414.1| PREDICTED: thiazole biosynthetic enzyme, chloroplastic [Vitis
            vinifera] gi|378524328|sp|F6H7K5.1|THI42_VITVI RecName:
            Full=Thiamine thiazole synthase 2, chloroplastic;
            AltName: Full=Thiazole biosynthetic enzyme 2; Flags:
            Precursor
          Length = 355

 Score =  537 bits (1383), Expect = e-150
 Identities = 273/337 (81%), Positives = 296/337 (87%), Gaps = 1/337 (0%)
 Frame = +1

Query: 85   ISTKPKTSFLDSQSSFHGIPFTQTCLQVQPLRXXXXXXXXXXXXXXXYDLNSFTFEPIKE 264
            +S+ PK +F D++SSFHG P +    +V P++               YDL SF FEPIKE
Sbjct: 11   LSSNPKPAFFDNKSSFHGSPISY---RVLPIKVSHQSPTISMSSVSPYDLQSFKFEPIKE 67

Query: 265  SIVSREMTRRYMMDMITYADTDVVVVGAGSAGLTAAYEISKNPNVNVALIEQSVSPGGGA 444
            SIV+REMTRRYMMDMITYADTDVV+VGAGSAGL+ AYE+SKNP++ VA+IEQSVSPGGGA
Sbjct: 68   SIVAREMTRRYMMDMITYADTDVVIVGAGSAGLSCAYELSKNPSIRVAIIEQSVSPGGGA 127

Query: 445  WLGGQLFSAMVVRKPAHRFLDELEIEYDEQDTYVVIKHAALFTSTIMSKLLARPNVKLFN 624
            WLGGQLFSAMVVRKPAH FLDEL IEYDEQD YVVIKHAALFTSTIMSKLLARPNVKLFN
Sbjct: 128  WLGGQLFSAMVVRKPAHHFLDELGIEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFN 187

Query: 625  AVAAEDLIVKGNKVAGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVK 804
            AVAAEDLIVK  +VAGVVTNWALVSMNHDTQSCMDPNVMEAK+VVSSCGHDGPFGATGVK
Sbjct: 188  AVAAEDLIVKEERVAGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK 247

Query: 805  RLKSIGLIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGCPRMGPTFGAM 984
            RLKSIG+IDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDG PRMGPTFGAM
Sbjct: 248  RLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAM 307

Query: 985  MISGQKAAHLALKALGQPNVIDGTYKDG-SIHPELIL 1092
            MISGQKAAHLAL+ALGQPN IDG Y +  ++ PELIL
Sbjct: 308  MISGQKAAHLALRALGQPNAIDGNYTEAETMQPELIL 344


>gb|AFM35683.1| thiamin biosynthetic protein [Vitis pseudoreticulata]
          Length = 355

 Score =  534 bits (1376), Expect = e-149
 Identities = 271/337 (80%), Positives = 295/337 (87%), Gaps = 1/337 (0%)
 Frame = +1

Query: 85   ISTKPKTSFLDSQSSFHGIPFTQTCLQVQPLRXXXXXXXXXXXXXXXYDLNSFTFEPIKE 264
            +S+ PK +F D++SSFHG P +    +V P++               YDL SF FEPIKE
Sbjct: 11   LSSNPKPAFFDNKSSFHGSPISY---RVLPIKVSHQSPTISMSSASPYDLQSFKFEPIKE 67

Query: 265  SIVSREMTRRYMMDMITYADTDVVVVGAGSAGLTAAYEISKNPNVNVALIEQSVSPGGGA 444
            SIV+REMTRRYMMDMITYADTDVV+VGAGSAGL+ AYE+SKNP++ VA+IEQSVSPGGGA
Sbjct: 68   SIVAREMTRRYMMDMITYADTDVVIVGAGSAGLSCAYELSKNPSIRVAIIEQSVSPGGGA 127

Query: 445  WLGGQLFSAMVVRKPAHRFLDELEIEYDEQDTYVVIKHAALFTSTIMSKLLARPNVKLFN 624
            WLGGQLFSAMVVRKPAH FLDEL IEYDEQD YVVIKHAALFTSTIMSKLLARPNVKL N
Sbjct: 128  WLGGQLFSAMVVRKPAHHFLDELGIEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLLN 187

Query: 625  AVAAEDLIVKGNKVAGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVK 804
            AVAAEDLIVK  +VAGVVTNWALVSMNHDTQSCMDPNVMEAK+VVSSCGHDGPFGATGVK
Sbjct: 188  AVAAEDLIVKEERVAGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK 247

Query: 805  RLKSIGLIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGCPRMGPTFGAM 984
            RLKS+G+IDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDG PRMGPTFGAM
Sbjct: 248  RLKSVGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAM 307

Query: 985  MISGQKAAHLALKALGQPNVIDGTYKDG-SIHPELIL 1092
            MISGQKAAHLAL+ALGQPN IDG Y +  ++ PELIL
Sbjct: 308  MISGQKAAHLALRALGQPNAIDGNYTEAETMQPELIL 344


>ref|XP_002317206.1| predicted protein [Populus trichocarpa] gi|222860271|gb|EEE97818.1|
            predicted protein [Populus trichocarpa]
          Length = 350

 Score =  534 bits (1375), Expect = e-149
 Identities = 272/337 (80%), Positives = 297/337 (88%)
 Frame = +1

Query: 82   HISTKPKTSFLDSQSSFHGIPFTQTCLQVQPLRXXXXXXXXXXXXXXXYDLNSFTFEPIK 261
            ++S   K+SFLD++SSFHG P T T  +  P++               YDL SF F+PIK
Sbjct: 8    YLSANLKSSFLDNKSSFHGTPITTTT-RFTPIKSTSPAISMSLTQPS-YDLQSFKFQPIK 65

Query: 262  ESIVSREMTRRYMMDMITYADTDVVVVGAGSAGLTAAYEISKNPNVNVALIEQSVSPGGG 441
            ESIVSREMTRRYM DM+TYADTDVV+VGAGSAGL+ AYE+SKNP+V VA+IEQSVSPGGG
Sbjct: 66   ESIVSREMTRRYMTDMVTYADTDVVIVGAGSAGLSCAYELSKNPSVRVAIIEQSVSPGGG 125

Query: 442  AWLGGQLFSAMVVRKPAHRFLDELEIEYDEQDTYVVIKHAALFTSTIMSKLLARPNVKLF 621
            AWLGGQLFSAM+VRKPAHRFLDELEIEYDE D YVVIKHAALFTSTIMSKLLARPNVKLF
Sbjct: 126  AWLGGQLFSAMIVRKPAHRFLDELEIEYDEADNYVVIKHAALFTSTIMSKLLARPNVKLF 185

Query: 622  NAVAAEDLIVKGNKVAGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGV 801
            NAVAAEDLIVKG +V+GVVTNWALVSMNH+TQSCMDPNVMEAK+VVSSCGHDGPFGATGV
Sbjct: 186  NAVAAEDLIVKGGRVSGVVTNWALVSMNHNTQSCMDPNVMEAKVVVSSCGHDGPFGATGV 245

Query: 802  KRLKSIGLIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGCPRMGPTFGA 981
            KRLKSIG+IDSVPGMKALDMN AEDAIVRLTREIVPGMIVTGMEVAEIDG PRMGPTFGA
Sbjct: 246  KRLKSIGMIDSVPGMKALDMNAAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGA 305

Query: 982  MMISGQKAAHLALKALGQPNVIDGTYKDGSIHPELIL 1092
            MMISGQKAAHLALKALGQPN +DGT+   S+ PEL+L
Sbjct: 306  MMISGQKAAHLALKALGQPNALDGTF---SLQPELVL 339


>ref|XP_002305603.1| predicted protein [Populus trichocarpa] gi|118486164|gb|ABK94925.1|
            unknown [Populus trichocarpa] gi|222848567|gb|EEE86114.1|
            predicted protein [Populus trichocarpa]
          Length = 350

 Score =  533 bits (1373), Expect = e-149
 Identities = 275/338 (81%), Positives = 296/338 (87%)
 Frame = +1

Query: 79   SHISTKPKTSFLDSQSSFHGIPFTQTCLQVQPLRXXXXXXXXXXXXXXXYDLNSFTFEPI 258
            S +S   K+SFLD +SSFHG P T T  +  P++               YDL SF F+PI
Sbjct: 7    SSLSINLKSSFLDHKSSFHGTPITTTG-RFTPIKSTSPAITMSLTQPS-YDLQSFKFQPI 64

Query: 259  KESIVSREMTRRYMMDMITYADTDVVVVGAGSAGLTAAYEISKNPNVNVALIEQSVSPGG 438
            KESIVSREMTRRYM DM+TYADTDVVVVGAGSAGL+ AYE+SKNP+V VA+IEQSVSPGG
Sbjct: 65   KESIVSREMTRRYMTDMVTYADTDVVVVGAGSAGLSCAYELSKNPSVRVAIIEQSVSPGG 124

Query: 439  GAWLGGQLFSAMVVRKPAHRFLDELEIEYDEQDTYVVIKHAALFTSTIMSKLLARPNVKL 618
            GAWLGGQLFSAM+VRKPAHRFLDELEIEYDE D YVVIKHAALFTSTIMSKLLARPNVKL
Sbjct: 125  GAWLGGQLFSAMIVRKPAHRFLDELEIEYDEADNYVVIKHAALFTSTIMSKLLARPNVKL 184

Query: 619  FNAVAAEDLIVKGNKVAGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATG 798
            FNAVAAEDLIVKG +V+GVVTNWALVSMNH+TQSCMDPNVMEAKIVVSSCGHDGPFGATG
Sbjct: 185  FNAVAAEDLIVKGGRVSGVVTNWALVSMNHNTQSCMDPNVMEAKIVVSSCGHDGPFGATG 244

Query: 799  VKRLKSIGLIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGCPRMGPTFG 978
            VKRLKSIG+IDSVPGMKALDMN AEDAIVRLTREIVPGMIVTGMEVAEIDG PRMGPTFG
Sbjct: 245  VKRLKSIGMIDSVPGMKALDMNAAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFG 304

Query: 979  AMMISGQKAAHLALKALGQPNVIDGTYKDGSIHPELIL 1092
            AMMISGQKAAHLALKALGQPN +DGT+   S+ PEL+L
Sbjct: 305  AMMISGQKAAHLALKALGQPNALDGTF---SLQPELVL 339


>gb|ABK94930.1| unknown [Populus trichocarpa]
          Length = 357

 Score =  530 bits (1365), Expect = e-148
 Identities = 269/337 (79%), Positives = 295/337 (87%), Gaps = 1/337 (0%)
 Frame = +1

Query: 85   ISTKP-KTSFLDSQSSFHGIPFTQTCLQVQPLRXXXXXXXXXXXXXXXYDLNSFTFEPIK 261
            +STK  K S  D+ SSFHG P ++  L++QP +               YDLN+F FEPIK
Sbjct: 11   LSTKSQKLSPFDTSSSFHGTPISKPTLRMQPTKSSSSPNVSISMSSPPYDLNAFKFEPIK 70

Query: 262  ESIVSREMTRRYMMDMITYADTDVVVVGAGSAGLTAAYEISKNPNVNVALIEQSVSPGGG 441
            ESIVSREMTRRYMMDMIT+ADTDVV+VGAGSAGL+ AYE+SKNP+V +A++EQSVSPGGG
Sbjct: 71   ESIVSREMTRRYMMDMITHADTDVVIVGAGSAGLSCAYELSKNPSVKIAIVEQSVSPGGG 130

Query: 442  AWLGGQLFSAMVVRKPAHRFLDELEIEYDEQDTYVVIKHAALFTSTIMSKLLARPNVKLF 621
            AWLGGQLFSAMVVRKPAH FL+EL IEYDEQ+ YVVIKHAALFTSTIMSKLLARPNVKLF
Sbjct: 131  AWLGGQLFSAMVVRKPAHLFLNELGIEYDEQEDYVVIKHAALFTSTIMSKLLARPNVKLF 190

Query: 622  NAVAAEDLIVKGNKVAGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGV 801
            NAVAAEDLIVK  +V GVVTNWALVSMNHDTQSCMDPNVMEAK+VVSSCGHDGPFGATGV
Sbjct: 191  NAVAAEDLIVKEGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGV 250

Query: 802  KRLKSIGLIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGCPRMGPTFGA 981
            KRLKSIG+IDSVPGMKALDMN AEDAIV+LTRE+VPGMIVTGMEVAEIDG PRMGPTFGA
Sbjct: 251  KRLKSIGMIDSVPGMKALDMNAAEDAIVKLTREVVPGMIVTGMEVAEIDGSPRMGPTFGA 310

Query: 982  MMISGQKAAHLALKALGQPNVIDGTYKDGSIHPELIL 1092
            MMISGQKAAHLALK+LG PN +DGT+  G IHPELIL
Sbjct: 311  MMISGQKAAHLALKSLGMPNALDGTFV-GGIHPELIL 346


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