BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000420
         (850 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137806.1| PREDICTED: 40S ribosomal protein S23-like [C...   140   4e-31
gb|AAF23298.1|AC016661_23 putative 40S ribosomal protein S23 [Ar...   140   4e-31
gb|ABB16993.1| unknown [Solanum tuberosum]                            140   4e-31
gb|ABA25923.1| 40S ribosomal protein [Picea mariana]                  140   4e-31
sp|P46297.1|RS23_FRAAN RecName: Full=40S ribosomal protein S23; ...   140   4e-31

>ref|XP_004137806.1| PREDICTED: 40S ribosomal protein S23-like [Cucumis sativus]
           gi|449452122|ref|XP_004143809.1| PREDICTED: 40S
           ribosomal protein S23-like [Cucumis sativus]
           gi|449463681|ref|XP_004149560.1| PREDICTED: 40S
           ribosomal protein S23-like [Cucumis sativus]
           gi|449483351|ref|XP_004156564.1| PREDICTED: 40S
           ribosomal protein S23-like [Cucumis sativus]
           gi|449508653|ref|XP_004163373.1| PREDICTED: 40S
           ribosomal protein S23-like [Cucumis sativus]
           gi|449521770|ref|XP_004167902.1| PREDICTED: 40S
           ribosomal protein S23-like [Cucumis sativus]
          Length = 142

 Score =  140 bits (353), Expect = 4e-31
 Identities = 69/69 (100%), Positives = 69/69 (100%)
 Frame = -2

Query: 528 IKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALF 349
           IKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALF
Sbjct: 74  IKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALF 133

Query: 348 KEKKEKPRS 322
           KEKKEKPRS
Sbjct: 134 KEKKEKPRS 142



 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 32/33 (96%), Positives = 33/33 (100%)
 Frame = -1

Query: 754 MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLG 656
           MGKTRGMGAGRKLKSHRRRQRWADK+YKKSHLG
Sbjct: 1   MGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLG 33


>gb|AAF23298.1|AC016661_23 putative 40S ribosomal protein S23 [Arabidopsis thaliana]
          Length = 136

 Score =  140 bits (353), Expect = 4e-31
 Identities = 69/69 (100%), Positives = 69/69 (100%)
 Frame = -2

Query: 528 IKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALF 349
           IKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALF
Sbjct: 68  IKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALF 127

Query: 348 KEKKEKPRS 322
           KEKKEKPRS
Sbjct: 128 KEKKEKPRS 136


>gb|ABB16993.1| unknown [Solanum tuberosum]
          Length = 142

 Score =  140 bits (353), Expect = 4e-31
 Identities = 69/69 (100%), Positives = 69/69 (100%)
 Frame = -2

Query: 528 IKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALF 349
           IKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALF
Sbjct: 74  IKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALF 133

Query: 348 KEKKEKPRS 322
           KEKKEKPRS
Sbjct: 134 KEKKEKPRS 142



 Score = 73.2 bits (178), Expect = 7e-11
 Identities = 33/33 (100%), Positives = 33/33 (100%)
 Frame = -1

Query: 754 MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLG 656
           MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLG
Sbjct: 1   MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLG 33


>gb|ABA25923.1| 40S ribosomal protein [Picea mariana]
          Length = 82

 Score =  140 bits (353), Expect = 4e-31
 Identities = 69/69 (100%), Positives = 69/69 (100%)
 Frame = -2

Query: 528 IKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALF 349
           IKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALF
Sbjct: 14  IKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALF 73

Query: 348 KEKKEKPRS 322
           KEKKEKPRS
Sbjct: 74  KEKKEKPRS 82


>sp|P46297.1|RS23_FRAAN RecName: Full=40S ribosomal protein S23; AltName: Full=S12
           gi|643074|gb|AAA79921.1| putative 40S ribosomal protein
           s12 [Fragaria x ananassa]
          Length = 142

 Score =  140 bits (353), Expect = 4e-31
 Identities = 69/69 (100%), Positives = 69/69 (100%)
 Frame = -2

Query: 528 IKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALF 349
           IKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALF
Sbjct: 74  IKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALF 133

Query: 348 KEKKEKPRS 322
           KEKKEKPRS
Sbjct: 134 KEKKEKPRS 142



 Score = 69.7 bits (169), Expect = 8e-10
 Identities = 31/33 (93%), Positives = 32/33 (96%)
 Frame = -1

Query: 754 MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLG 656
           MGKTRGMGA RKLK+HRRRQRWADKSYKKSHLG
Sbjct: 1   MGKTRGMGAARKLKNHRRRQRWADKSYKKSHLG 33