BLASTX nr result

ID: Coptis23_contig00000415 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000415
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]            74   2e-11
emb|CAN81279.1| hypothetical protein VITISV_012088 [Vitis vinifera]    71   1e-10
emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]    71   1e-10
ref|XP_002312968.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002298374.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10

>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/71 (47%), Positives = 50/71 (70%)
 Frame = -2

Query: 217 GSSMSEHLNEVQNTINQMHLMKINLGDEVEALFLLGSLPESWETLAVSLHGAAKDGIVTM 38
           G+++++HLNE+Q  ++Q+  M I   DEV AL +L +LPESWETL VS+  +A +G+V M
Sbjct: 113 GTTVADHLNEIQGIVDQLSGMGIKFDDEVLALMVLATLPESWETLKVSITNSAPNGVVNM 172

Query: 37  EMATMALLNEE 5
           E     +LNEE
Sbjct: 173 ETVKSGILNEE 183


>emb|CAN81279.1| hypothetical protein VITISV_012088 [Vitis vinifera]
          Length = 330

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/71 (46%), Positives = 46/71 (64%)
 Frame = -2

Query: 217 GSSMSEHLNEVQNTINQMHLMKINLGDEVEALFLLGSLPESWETLAVSLHGAAKDGIVTM 38
           G+ M++HLN  Q  INQ+  M I   +EV+ L+L G+LP+SWET   SL   A DGI+ M
Sbjct: 78  GTPMTDHLNTFQGIINQLAGMNIKFEEEVQGLWLFGTLPDSWETFRTSLSNLAPDGIMNM 137

Query: 37  EMATMALLNEE 5
           ++    +LNEE
Sbjct: 138 DLVKSCVLNEE 148


>emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]
          Length = 1362

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/71 (46%), Positives = 47/71 (66%)
 Frame = -2

Query: 217 GSSMSEHLNEVQNTINQMHLMKINLGDEVEALFLLGSLPESWETLAVSLHGAAKDGIVTM 38
           G+  ++HLN  Q  INQ+  M I   +EV+ L+LLG+LP+SWET   SL  +A DGI+ M
Sbjct: 91  GTXXTDHLNTFQGIINQLAGMNIKFEEEVQGLWLLGTLPDSWETFRTSLSNSAPDGIMNM 150

Query: 37  EMATMALLNEE 5
           ++    +LNEE
Sbjct: 151 DLVKSCVLNEE 161


>ref|XP_002312968.1| predicted protein [Populus trichocarpa] gi|222849376|gb|EEE86923.1|
           predicted protein [Populus trichocarpa]
          Length = 371

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/71 (46%), Positives = 46/71 (64%)
 Frame = -2

Query: 217 GSSMSEHLNEVQNTINQMHLMKINLGDEVEALFLLGSLPESWETLAVSLHGAAKDGIVTM 38
           G   S H+N  Q  +NQ+ LM + L DE++AL LL SLP+SWETL VSL  +  +G +T+
Sbjct: 114 GEDASVHINVFQGFLNQLSLMNLELADEMQALILLSSLPDSWETLVVSLSNSTPNGKLTL 173

Query: 37  EMATMALLNEE 5
           +     +LNEE
Sbjct: 174 KTVKDCILNEE 184


>ref|XP_002298374.1| predicted protein [Populus trichocarpa] gi|222845632|gb|EEE83179.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/71 (46%), Positives = 46/71 (64%)
 Frame = -2

Query: 217 GSSMSEHLNEVQNTINQMHLMKINLGDEVEALFLLGSLPESWETLAVSLHGAAKDGIVTM 38
           G   S H+N  Q  +NQ+ LM + L DE++AL LL SLP+SWETL VSL  +  +G +T+
Sbjct: 114 GEDASVHINVFQGFLNQLSLMNLELADEMQALILLSSLPDSWETLVVSLSNSTPNGKLTL 173

Query: 37  EMATMALLNEE 5
           +     +LNEE
Sbjct: 174 KTVKDCILNEE 184


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