BLASTX nr result
ID: Coptis23_contig00000402
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00000402
(1607 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002523907.1| eukaryotic translation elongation factor, pu... 900 0.0
ref|XP_002456335.1| hypothetical protein SORBIDRAFT_03g034200 [S... 900 0.0
ref|XP_003569442.1| PREDICTED: elongation factor 2-like [Brachyp... 899 0.0
ref|XP_003575016.1| PREDICTED: elongation factor 2-like isoform ... 898 0.0
ref|XP_003575042.1| PREDICTED: elongation factor 2-like [Brachyp... 898 0.0
>ref|XP_002523907.1| eukaryotic translation elongation factor, putative [Ricinus communis]
gi|223536837|gb|EEF38476.1| eukaryotic translation
elongation factor, putative [Ricinus communis]
Length = 843
Score = 900 bits (2326), Expect = 0.0
Identities = 454/547 (82%), Positives = 469/547 (85%), Gaps = 12/547 (2%)
Frame = -1
Query: 1607 PATKKWTTKNTGSPTCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLKKLGVTMKSDEKE 1428
PATKKWT+KNTGSPTCKRGFVQFCYEPIKQIINTCMNDQKDKLWPML+KLGVTMKSDEKE
Sbjct: 252 PATKKWTSKNTGSPTCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGVTMKSDEKE 311
Query: 1427 LLGKALMKRVMQTWLPASTALLEMMIHHLPSPSKAQRYRVENLYEGPLDDKYAEAIRNCD 1248
L+GKALMKRVMQTWLPAS+ALLEMMI HLPSP+KAQRYRVENLYEGPLDD YA AIRNCD
Sbjct: 312 LMGKALMKRVMQTWLPASSALLEMMIFHLPSPAKAQRYRVENLYEGPLDDPYATAIRNCD 371
Query: 1247 PEGPLMLYVSKMIPASDXXXXXXXXXXXXXXVSTGTKVRIMGPNYVPGQKKDLYTKSVQR 1068
PEGPLMLYVSKMIPASD VSTG KVRIMGPNYVPG+KKDLY KSVQR
Sbjct: 372 PEGPLMLYVSKMIPASDKGRFFAFGRVFAGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQR 431
Query: 1067 TVIWMGKKQESVEDVPCGNTVALVGLDQFITKNATLTNEKEVEAHPIRAMKFSVSPVVRV 888
TVIWMGKKQE+VEDVPCGNTVALVGLDQFITKNATLTNEKEV+AHPIRAMKFSVSPVVRV
Sbjct: 432 TVIWMGKKQETVEDVPCGNTVALVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRV 491
Query: 887 AVQCKVASDLPKLVEGLKRLAKSDP------------XXXXXXXXXXXXXXXXXXXXXXX 744
AVQCKVASDLPKLVEGLKRLAKSDP
Sbjct: 492 AVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIIAGAGELHLEICLKDLQDDFMG 551
Query: 743 XXXXXXXXXXXXXXXXXLEKSVRTVMSKSPNKHNRLYMEARPLEDGLAEAIDDGRIGPRD 564
LEKS R VMSKSPNKHNRLYMEARP+E+GLAEAID+GRIGPRD
Sbjct: 552 GAEIIKSDPVVSFRETVLEKSCRVVMSKSPNKHNRLYMEARPMEEGLAEAIDEGRIGPRD 611
Query: 563 DPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWA 384
DPK R+KILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWA
Sbjct: 612 DPKARAKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWA 671
Query: 383 SKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQITAKPRLLEPVYM 204
SKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQ+TAKPRLLEPVY+
Sbjct: 672 SKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYL 731
Query: 203 VEIQAPEQALGGIYGVLNQKRGHVFEEMQRQGTPLYNIKAYLPVIESFGFSAQLRAATSG 24
VEIQAPEQALGGIY VLNQKRGHVFEE+QR GTPLYNIKAYLPVIESFGFS LRAATSG
Sbjct: 732 VEIQAPEQALGGIYSVLNQKRGHVFEELQRPGTPLYNIKAYLPVIESFGFSGTLRAATSG 791
Query: 23 QAFPQCV 3
QAFPQCV
Sbjct: 792 QAFPQCV 798
>ref|XP_002456335.1| hypothetical protein SORBIDRAFT_03g034200 [Sorghum bicolor]
gi|241928310|gb|EES01455.1| hypothetical protein
SORBIDRAFT_03g034200 [Sorghum bicolor]
Length = 843
Score = 900 bits (2325), Expect = 0.0
Identities = 455/547 (83%), Positives = 471/547 (86%), Gaps = 12/547 (2%)
Frame = -1
Query: 1607 PATKKWTTKNTGSPTCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLKKLGVTMKSDEKE 1428
PATKKWTTKNTGSPTCKRGFVQFCYEPIKQIINTCMNDQK+KLWPML+KL VTMK+DEKE
Sbjct: 252 PATKKWTTKNTGSPTCKRGFVQFCYEPIKQIINTCMNDQKEKLWPMLQKLNVTMKADEKE 311
Query: 1427 LLGKALMKRVMQTWLPASTALLEMMIHHLPSPSKAQRYRVENLYEGPLDDKYAEAIRNCD 1248
L+GKALMKRVMQTWLPASTALLEMMI HLPSP+KAQ+YRVENLYEGPLDD YA AIRNCD
Sbjct: 312 LIGKALMKRVMQTWLPASTALLEMMIFHLPSPAKAQKYRVENLYEGPLDDVYATAIRNCD 371
Query: 1247 PEGPLMLYVSKMIPASDXXXXXXXXXXXXXXVSTGTKVRIMGPNYVPGQKKDLYTKSVQR 1068
PEGPLMLYVSKMIPASD V+TG KVRIMGPNYVPGQKKDLY KSVQR
Sbjct: 372 PEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVATGMKVRIMGPNYVPGQKKDLYVKSVQR 431
Query: 1067 TVIWMGKKQESVEDVPCGNTVALVGLDQFITKNATLTNEKEVEAHPIRAMKFSVSPVVRV 888
TVIWMGKKQESVEDVPCGNTVA+VGLDQFITKNATLTNEKEV+A PIRAMKFSVSPVVRV
Sbjct: 432 TVIWMGKKQESVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDACPIRAMKFSVSPVVRV 491
Query: 887 AVQCKVASDLPKLVEGLKRLAKSDP------------XXXXXXXXXXXXXXXXXXXXXXX 744
AVQCKVASDLPKLVEGLKRLAKSDP
Sbjct: 492 AVQCKVASDLPKLVEGLKRLAKSDPMVLCTIEESGEHIIAGAGELHLEICLKDLQEDFMG 551
Query: 743 XXXXXXXXXXXXXXXXXLEKSVRTVMSKSPNKHNRLYMEARPLEDGLAEAIDDGRIGPRD 564
LEKS RTVMSKSPNKHNRLYMEARPLE+GLAEAID+GRIGPRD
Sbjct: 552 GAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDEGRIGPRD 611
Query: 563 DPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWA 384
DPKVRS+ILS+EFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWA
Sbjct: 612 DPKVRSQILSQEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWA 671
Query: 383 SKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQITAKPRLLEPVYM 204
SKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQ+TAKPRLLEPVY+
Sbjct: 672 SKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYL 731
Query: 203 VEIQAPEQALGGIYGVLNQKRGHVFEEMQRQGTPLYNIKAYLPVIESFGFSAQLRAATSG 24
VEIQAPE ALGGIYGVLNQKRGHVFEEMQR GTPLYNIKAYLPVIESFGFS+QLRAATSG
Sbjct: 732 VEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSQLRAATSG 791
Query: 23 QAFPQCV 3
QAFPQCV
Sbjct: 792 QAFPQCV 798
>ref|XP_003569442.1| PREDICTED: elongation factor 2-like [Brachypodium distachyon]
Length = 843
Score = 899 bits (2324), Expect = 0.0
Identities = 455/547 (83%), Positives = 469/547 (85%), Gaps = 12/547 (2%)
Frame = -1
Query: 1607 PATKKWTTKNTGSPTCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLKKLGVTMKSDEKE 1428
P TKKWT+KNTGSPTCKRGFVQFCY+PIKQIINTCMNDQKDKLWPML+KLGVTMK+DEKE
Sbjct: 252 PTTKKWTSKNTGSPTCKRGFVQFCYDPIKQIINTCMNDQKDKLWPMLQKLGVTMKTDEKE 311
Query: 1427 LLGKALMKRVMQTWLPASTALLEMMIHHLPSPSKAQRYRVENLYEGPLDDKYAEAIRNCD 1248
L+GKALMKRVMQTWLPASTALLEMMI HLPSPSKAQ+YRVENLYEGPLDD YA AIRNCD
Sbjct: 312 LMGKALMKRVMQTWLPASTALLEMMIFHLPSPSKAQKYRVENLYEGPLDDIYATAIRNCD 371
Query: 1247 PEGPLMLYVSKMIPASDXXXXXXXXXXXXXXVSTGTKVRIMGPNYVPGQKKDLYTKSVQR 1068
P+GPLMLYVSKMIPASD V+TG KVRIMGPNYVPGQKKDLY KSVQR
Sbjct: 372 PDGPLMLYVSKMIPASDRGRFFAFGRVFSGKVATGMKVRIMGPNYVPGQKKDLYVKSVQR 431
Query: 1067 TVIWMGKKQESVEDVPCGNTVALVGLDQFITKNATLTNEKEVEAHPIRAMKFSVSPVVRV 888
TVIWMGKKQESVEDVPCGNTVA+VGLDQFITKNATLTNEKEV+A PIRAMKFSVSPVVRV
Sbjct: 432 TVIWMGKKQESVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDACPIRAMKFSVSPVVRV 491
Query: 887 AVQCKVASDLPKLVEGLKRLAKSDP------------XXXXXXXXXXXXXXXXXXXXXXX 744
AVQCKVASDLPKLVEGLKRLAKSDP
Sbjct: 492 AVQCKVASDLPKLVEGLKRLAKSDPMVLCTMEESGEHIIAGAGELHLEICLKDLQEDFMG 551
Query: 743 XXXXXXXXXXXXXXXXXLEKSVRTVMSKSPNKHNRLYMEARPLEDGLAEAIDDGRIGPRD 564
LEKS RTVMSKSPNKHNRLYMEARPLE+GLAEAIDDGRIGPRD
Sbjct: 552 GAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRD 611
Query: 563 DPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWA 384
DPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWA
Sbjct: 612 DPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWA 671
Query: 383 SKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQITAKPRLLEPVYM 204
SKEGALAEENMRGICFEVCDVVLH DAIHRGGGQVIPTARRVIYASQ+TAKPRLLEPVY+
Sbjct: 672 SKEGALAEENMRGICFEVCDVVLHTDAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYL 731
Query: 203 VEIQAPEQALGGIYGVLNQKRGHVFEEMQRQGTPLYNIKAYLPVIESFGFSAQLRAATSG 24
VEIQAPE ALGGIYGVLNQKRGHVFEEMQR GTPLYNIKAYLPVIESFGFS+ LRAATSG
Sbjct: 732 VEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSTLRAATSG 791
Query: 23 QAFPQCV 3
QAFPQCV
Sbjct: 792 QAFPQCV 798
>ref|XP_003575016.1| PREDICTED: elongation factor 2-like isoform 1 [Brachypodium
distachyon] gi|357149150|ref|XP_003575017.1| PREDICTED:
elongation factor 2-like isoform 2 [Brachypodium
distachyon] gi|357149153|ref|XP_003575018.1| PREDICTED:
elongation factor 2-like isoform 3 [Brachypodium
distachyon] gi|357149155|ref|XP_003575019.1| PREDICTED:
elongation factor 2-like isoform 4 [Brachypodium
distachyon]
Length = 763
Score = 898 bits (2321), Expect = 0.0
Identities = 456/547 (83%), Positives = 466/547 (85%), Gaps = 12/547 (2%)
Frame = -1
Query: 1607 PATKKWTTKNTGSPTCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLKKLGVTMKSDEKE 1428
P TKKWTTKNTGS TCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLKKLGVTMK+DEK+
Sbjct: 172 PTTKKWTTKNTGSATCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLKKLGVTMKNDEKD 231
Query: 1427 LLGKALMKRVMQTWLPASTALLEMMIHHLPSPSKAQRYRVENLYEGPLDDKYAEAIRNCD 1248
L+GKALMKRVMQTWLPAS ALLEMM+ HLPSPSKAQRYRVENLYEGPLDD YA AIRNCD
Sbjct: 232 LMGKALMKRVMQTWLPASRALLEMMVFHLPSPSKAQRYRVENLYEGPLDDVYATAIRNCD 291
Query: 1247 PEGPLMLYVSKMIPASDXXXXXXXXXXXXXXVSTGTKVRIMGPNYVPGQKKDLYTKSVQR 1068
PEGPLMLYVSKMIPASD V+TG KVRIMGPNYVPGQKKDLY KSVQR
Sbjct: 292 PEGPLMLYVSKMIPASDKGRFFAFGRVFAGRVATGMKVRIMGPNYVPGQKKDLYVKSVQR 351
Query: 1067 TVIWMGKKQESVEDVPCGNTVALVGLDQFITKNATLTNEKEVEAHPIRAMKFSVSPVVRV 888
TVIWMGKKQESVEDVPCGNTVALVGLDQFITKNATLTNEKE +A PIRAMKFSVSPVVRV
Sbjct: 352 TVIWMGKKQESVEDVPCGNTVALVGLDQFITKNATLTNEKETDACPIRAMKFSVSPVVRV 411
Query: 887 AVQCKVASDLPKLVEGLKRLAKSDP------------XXXXXXXXXXXXXXXXXXXXXXX 744
AVQCKVASDLPKLVEGLKRLAKSDP
Sbjct: 412 AVQCKVASDLPKLVEGLKRLAKSDPMVLCTIEESGEHIIAGAGELHLEICLKDLQDDFMG 471
Query: 743 XXXXXXXXXXXXXXXXXLEKSVRTVMSKSPNKHNRLYMEARPLEDGLAEAIDDGRIGPRD 564
LEKS RTVMSKSPNKHNRLYMEARPLE+GLAEAIDDGRIGPRD
Sbjct: 472 GAEIIVSPPVVSFRETVLEKSSRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRD 531
Query: 563 DPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWA 384
DPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWA
Sbjct: 532 DPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWA 591
Query: 383 SKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQITAKPRLLEPVYM 204
SKEGALAEENMRGICFEVCDVVLH DAIHRGGGQVIPTARRVIYASQ+TAKPRLLEPVY+
Sbjct: 592 SKEGALAEENMRGICFEVCDVVLHTDAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYL 651
Query: 203 VEIQAPEQALGGIYGVLNQKRGHVFEEMQRQGTPLYNIKAYLPVIESFGFSAQLRAATSG 24
VEIQAPE ALGGIYGVLNQKRGHVFEEMQR GTPLYNIKAYLPVIESFGFS+ LRAATSG
Sbjct: 652 VEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSTLRAATSG 711
Query: 23 QAFPQCV 3
QAFPQCV
Sbjct: 712 QAFPQCV 718
>ref|XP_003575042.1| PREDICTED: elongation factor 2-like [Brachypodium distachyon]
Length = 843
Score = 898 bits (2320), Expect = 0.0
Identities = 456/547 (83%), Positives = 466/547 (85%), Gaps = 12/547 (2%)
Frame = -1
Query: 1607 PATKKWTTKNTGSPTCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLKKLGVTMKSDEKE 1428
P TKKWTTKNTGS TCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLKKLGVTMK+DEK+
Sbjct: 252 PTTKKWTTKNTGSATCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLKKLGVTMKNDEKD 311
Query: 1427 LLGKALMKRVMQTWLPASTALLEMMIHHLPSPSKAQRYRVENLYEGPLDDKYAEAIRNCD 1248
L+GKALMKRVMQTWLPAS ALLEMM+ HLPSPSKAQRYRVENLYEGPLDD YA AIRNCD
Sbjct: 312 LMGKALMKRVMQTWLPASRALLEMMVFHLPSPSKAQRYRVENLYEGPLDDIYATAIRNCD 371
Query: 1247 PEGPLMLYVSKMIPASDXXXXXXXXXXXXXXVSTGTKVRIMGPNYVPGQKKDLYTKSVQR 1068
PEGPLMLYVSKMIPASD V+TG KVRIMGPNYVPGQKKDLY KSVQR
Sbjct: 372 PEGPLMLYVSKMIPASDKGRFFAFGRVFAGRVATGMKVRIMGPNYVPGQKKDLYVKSVQR 431
Query: 1067 TVIWMGKKQESVEDVPCGNTVALVGLDQFITKNATLTNEKEVEAHPIRAMKFSVSPVVRV 888
TVIWMGKKQESVEDVPCGNTVALVGLDQFITKNATLTNEKE +A PIRAMKFSVSPVVRV
Sbjct: 432 TVIWMGKKQESVEDVPCGNTVALVGLDQFITKNATLTNEKETDACPIRAMKFSVSPVVRV 491
Query: 887 AVQCKVASDLPKLVEGLKRLAKSDP------------XXXXXXXXXXXXXXXXXXXXXXX 744
AVQCKVASDLPKLVEGLKRLAKSDP
Sbjct: 492 AVQCKVASDLPKLVEGLKRLAKSDPMVLCTIEESGEHIIAGAGELHLEICLKDLQDDFMG 551
Query: 743 XXXXXXXXXXXXXXXXXLEKSVRTVMSKSPNKHNRLYMEARPLEDGLAEAIDDGRIGPRD 564
LEKS RTVMSKSPNKHNRLYMEARPLE+GLAEAIDDGRIGPRD
Sbjct: 552 GAEIIVSPPVVSFRETVLEKSSRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRD 611
Query: 563 DPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWA 384
DPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWA
Sbjct: 612 DPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWA 671
Query: 383 SKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQITAKPRLLEPVYM 204
SKEGALAEENMRGICFEVCDVVLH DAIHRGGGQVIPTARRVIYASQ+TAKPRLLEPVY+
Sbjct: 672 SKEGALAEENMRGICFEVCDVVLHTDAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYL 731
Query: 203 VEIQAPEQALGGIYGVLNQKRGHVFEEMQRQGTPLYNIKAYLPVIESFGFSAQLRAATSG 24
VEIQAPE ALGGIYGVLNQKRGHVFEEMQR GTPLYNIKAYLPVIESFGFS+ LRAATSG
Sbjct: 732 VEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSTLRAATSG 791
Query: 23 QAFPQCV 3
QAFPQCV
Sbjct: 792 QAFPQCV 798