BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000397
         (1393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285721.1| PREDICTED: tubulin alpha-1 chain [Vitis vini...   591   e-166
ref|XP_001782790.1| predicted protein [Physcomitrella patens sub...   590   e-166
gb|AEG74028.1| alpha-tubulin [Pellia endiviifolia (species B)] g...   590   e-166
ref|XP_001777081.1| predicted protein [Physcomitrella patens sub...   590   e-166
gb|ABO47735.1| alpha-tubulin [Gossypium hirsutum]                     588   e-166

>ref|XP_002285721.1| PREDICTED: tubulin alpha-1 chain [Vitis vinifera]
          Length = 449

 Score =  591 bits (1523), Expect = e-166
 Identities = 302/366 (82%), Positives = 307/366 (83%)
 Frame = +3

Query: 294  FFSETGGGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGXXXXXXXXXXXXXXXX 473
            FFSETG GKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISG                
Sbjct: 52   FFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVG 111

Query: 474  XXXXXXXXXXXXXXXXXXXXXXXXCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXX 653
                                    CLDRVRKLADNCTGLQGFLVFNAV            
Sbjct: 112  KEIVDL------------------CLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLL 153

Query: 654  XXXXXVDYGKKSKLGFSIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDIC 833
                 VDYGKKSKLGF+IYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDIC
Sbjct: 154  LERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDIC 213

Query: 834  RKSLDIERPTYTNLNRLISQVISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYA 1013
            R+SLDIERPTYTNLNRLISQ+ISSLTTSLRFDGAINVD+TEFQTNLVPYPRIHFMLSSYA
Sbjct: 214  RRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYA 273

Query: 1014 PVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVA 1193
            PVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVA
Sbjct: 274  PVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVA 333

Query: 1194 TIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFARIDL 1373
            TIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVF+RID 
Sbjct: 334  TIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDH 393

Query: 1374 KFDLMY 1391
            KFDLMY
Sbjct: 394  KFDLMY 399



 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 26/26 (100%), Positives = 26/26 (100%)
 Frame = +1

Query: 61  MREIISIHIGQAGIQVGNSCWELYCL 138
           MREIISIHIGQAGIQVGNSCWELYCL
Sbjct: 1   MREIISIHIGQAGIQVGNSCWELYCL 26


>ref|XP_001782790.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|168061676|ref|XP_001782813.1| predicted protein
            [Physcomitrella patens subsp. patens]
            gi|25396545|dbj|BAC24799.1| alpha tubulin [Physcomitrella
            patens] gi|162665692|gb|EDQ52367.1| predicted protein
            [Physcomitrella patens subsp. patens]
            gi|162665715|gb|EDQ52390.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 449

 Score =  590 bits (1520), Expect = e-166
 Identities = 300/366 (81%), Positives = 307/366 (83%)
 Frame = +3

Query: 294  FFSETGGGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGXXXXXXXXXXXXXXXX 473
            FFSETG GKHVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISG                
Sbjct: 52   FFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVG 111

Query: 474  XXXXXXXXXXXXXXXXXXXXXXXXCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXX 653
                                    CLDRVRKLADNCTGLQGFLVFNAV            
Sbjct: 112  KEIVDL------------------CLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLL 153

Query: 654  XXXXXVDYGKKSKLGFSIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDIC 833
                 VDYGKKSKLGF+IYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDIC
Sbjct: 154  LERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDIC 213

Query: 834  RKSLDIERPTYTNLNRLISQVISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYA 1013
            R+SLDIERPTYTNLNRLISQ+ISSLTTSLRFDGA+NVD+TEFQTNLVPYPRIHFMLSSYA
Sbjct: 214  RRSLDIERPTYTNLNRLISQIISSLTTSLRFDGALNVDITEFQTNLVPYPRIHFMLSSYA 273

Query: 1014 PVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVA 1193
            PVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVA
Sbjct: 274  PVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVA 333

Query: 1194 TIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFARIDL 1373
            TIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVF+RID 
Sbjct: 334  TIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDH 393

Query: 1374 KFDLMY 1391
            KFDLMY
Sbjct: 394  KFDLMY 399



 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +1

Query: 61  MREIISIHIGQAGIQVGNSCWELYCL 138
           MREIISIHIGQAGIQVGN+CWELYCL
Sbjct: 1   MREIISIHIGQAGIQVGNACWELYCL 26


>gb|AEG74028.1| alpha-tubulin [Pellia endiviifolia (species B)]
            gi|334261583|gb|AEG74032.1| alpha-tubulin [Pellia
            endiviifolia (species B)]
          Length = 448

 Score =  590 bits (1520), Expect = e-166
 Identities = 300/366 (81%), Positives = 307/366 (83%)
 Frame = +3

Query: 294  FFSETGGGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGXXXXXXXXXXXXXXXX 473
            FFSETG GKHVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISG                
Sbjct: 52   FFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVG 111

Query: 474  XXXXXXXXXXXXXXXXXXXXXXXXCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXX 653
                                    CLDRVRKLADNCTGLQGFLVFNAV            
Sbjct: 112  KEIVDL------------------CLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLL 153

Query: 654  XXXXXVDYGKKSKLGFSIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDIC 833
                 VDYGKKSKLGF+IYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDIC
Sbjct: 154  LERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDIC 213

Query: 834  RKSLDIERPTYTNLNRLISQVISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYA 1013
            R+SLDIERPTYTNLNRLISQ+ISSLTTSLRFDGA+NVD+TEFQTNLVPYPRIHFMLSSYA
Sbjct: 214  RRSLDIERPTYTNLNRLISQIISSLTTSLRFDGALNVDITEFQTNLVPYPRIHFMLSSYA 273

Query: 1014 PVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVA 1193
            PVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVA
Sbjct: 274  PVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVA 333

Query: 1194 TIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFARIDL 1373
            TIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVF+RID 
Sbjct: 334  TIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDH 393

Query: 1374 KFDLMY 1391
            KFDLMY
Sbjct: 394  KFDLMY 399



 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +1

Query: 61  MREIISIHIGQAGIQVGNSCWELYCL 138
           MREIISIHIGQAGIQVGN+CWELYCL
Sbjct: 1   MREIISIHIGQAGIQVGNACWELYCL 26


>ref|XP_001777081.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|162671524|gb|EDQ58074.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 449

 Score =  590 bits (1520), Expect = e-166
 Identities = 300/366 (81%), Positives = 307/366 (83%)
 Frame = +3

Query: 294  FFSETGGGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGXXXXXXXXXXXXXXXX 473
            FFSETG GKHVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISG                
Sbjct: 52   FFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVG 111

Query: 474  XXXXXXXXXXXXXXXXXXXXXXXXCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXX 653
                                    CLDRVRKLADNCTGLQGFLVFNAV            
Sbjct: 112  KEIVDL------------------CLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLL 153

Query: 654  XXXXXVDYGKKSKLGFSIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDIC 833
                 VDYGKKSKLGF+IYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDIC
Sbjct: 154  LERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDIC 213

Query: 834  RKSLDIERPTYTNLNRLISQVISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYA 1013
            R+SLDIERPTYTNLNRLISQ+ISSLTTSLRFDGA+NVD+TEFQTNLVPYPRIHFMLSSYA
Sbjct: 214  RRSLDIERPTYTNLNRLISQIISSLTTSLRFDGALNVDITEFQTNLVPYPRIHFMLSSYA 273

Query: 1014 PVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVA 1193
            PVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVA
Sbjct: 274  PVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVA 333

Query: 1194 TIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFARIDL 1373
            TIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVF+RID 
Sbjct: 334  TIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDH 393

Query: 1374 KFDLMY 1391
            KFDLMY
Sbjct: 394  KFDLMY 399



 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +1

Query: 61  MREIISIHIGQAGIQVGNSCWELYCL 138
           MREIISIHIGQAGIQVGN+CWELYCL
Sbjct: 1   MREIISIHIGQAGIQVGNACWELYCL 26


>gb|ABO47735.1| alpha-tubulin [Gossypium hirsutum]
          Length = 449

 Score =  588 bits (1517), Expect = e-166
 Identities = 300/366 (81%), Positives = 306/366 (83%)
 Frame = +3

Query: 294  FFSETGGGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGXXXXXXXXXXXXXXXX 473
            FFSETG GKHVPRA+FVDLEPTVIDEVRTG YRQLFHPEQLISG                
Sbjct: 52   FFSETGSGKHVPRAVFVDLEPTVIDEVRTGPYRQLFHPEQLISGKEDAANNFARGHYTIG 111

Query: 474  XXXXXXXXXXXXXXXXXXXXXXXXCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXX 653
                                    CLDRVRKLADNCTGLQGF+VFNAV            
Sbjct: 112  KEIVDL------------------CLDRVRKLADNCTGLQGFMVFNAVGGGTGSGLGSLL 153

Query: 654  XXXXXVDYGKKSKLGFSIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDIC 833
                 VDYGKKSKLGF+IYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDIC
Sbjct: 154  LERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDIC 213

Query: 834  RKSLDIERPTYTNLNRLISQVISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYA 1013
            R+SLDIERPTYTNLNRLISQ+ISSLTTSLRFDGAINVD+TEFQTNLVPYPRIHFMLSSYA
Sbjct: 214  RRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYA 273

Query: 1014 PVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVA 1193
            PVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVA
Sbjct: 274  PVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVA 333

Query: 1194 TIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFARIDL 1373
            TIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFARID 
Sbjct: 334  TIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFARIDH 393

Query: 1374 KFDLMY 1391
            KFDLMY
Sbjct: 394  KFDLMY 399



 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +1

Query: 61  MREIISIHIGQAGIQVGNSCWELYCL 138
           MREIIS+HIGQAGIQVGNSCWELYCL
Sbjct: 1   MREIISVHIGQAGIQVGNSCWELYCL 26