BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000393
         (741 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510609.1| conserved hypothetical protein [Ricinus comm...    94   2e-17
ref|XP_002510608.1| conserved hypothetical protein [Ricinus comm...    93   7e-17
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    75   1e-11
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    75   1e-11
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    72   2e-10

>ref|XP_002510609.1| conserved hypothetical protein [Ricinus communis]
           gi|223551310|gb|EEF52796.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 68/230 (29%), Positives = 102/230 (44%), Gaps = 9/230 (3%)
 Frame = -2

Query: 737 DLVRFSCVCRPWRSHATPLLVPNLNLIPWLIIPYANYTCKITTNICDKTLGFFNIQDGKT 558
           D +    VC+ W S         L  +PWL++P+                GF+N  DGKT
Sbjct: 24  DYISTRAVCKSWWSAIPKKPHDLLCRLPWLLLPHHKDN--------PNHRGFYNPSDGKT 75

Query: 557 YKIDTPQLADRRICGSCSGGWLVTVHENSEIQVYHPFSKKVIELPPVTKLPG--VTGCFI 384
           Y ++ P+  D+R CGS S GWLV V +   I + +P +K  IELP ++  P       + 
Sbjct: 76  YHLELPETVDKRCCGS-SHGWLVMVEDTPSIFLLNPLTKSRIELPSLSTFPNFPTEVIYQ 134

Query: 383 DKRNELSYVVPNRPHFSYRVLEXXXXXXXXSEVRERYIYKAIMS--PSTGIVMVIQ---- 222
           + RN   Y + N                    +RE YI KAI+S  PS G  MV+     
Sbjct: 135 NSRNLNEYFIRNN----------------KLRIRETYIRKAIVSEDPSVGSFMVMAIYKT 178

Query: 221 -GRFRTLAVCRVGRVKKWYSVKGDIEGNYNDIAIYNNEFYAVNDFGQVFV 75
                 +A C+ G    + + +   E +Y D+  +  +FY VND G+V +
Sbjct: 179 INGSENIAFCKSGDAALFTTQETSQEIHYQDVMFHRGKFYMVNDKGRVSI 228


>ref|XP_002510608.1| conserved hypothetical protein [Ricinus communis]
           gi|223551309|gb|EEF52795.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score = 92.8 bits (229), Expect = 7e-17
 Identities = 68/229 (29%), Positives = 106/229 (46%), Gaps = 8/229 (3%)
 Frame = -2

Query: 737 DLVRFSCVCRPWRSHATPLLVPNLNLIPWLIIPYANYTCKITTNICDKTLGFFNIQDGKT 558
           D +    VC+ W S         L  +PWL++PY                GF+N+ DGKT
Sbjct: 24  DYISTRAVCKSWWSAIPKKPHDLLCQLPWLLLPYHKNN--------PNHRGFYNLADGKT 75

Query: 557 YKIDTPQLADRRICGSCSGGWLVTVHENSEIQVYHPFSKKVIELPPVTKLPGVTGCFIDK 378
           Y ++ P+  ++R CGS S GWLV V +   I + +P +K  IELP ++  P         
Sbjct: 76  YHLELPETIEKRCCGS-SHGWLVMVEDTPSIFLLNPLTKARIELPSLSTFP--------- 125

Query: 377 RNELSYVVPNRPHFSYRVLEXXXXXXXXSEVRERYIYKAIMS--PSTG--IVMVIQGRFR 210
                Y      + + R +           +RE YI KAI+S  PSTG   VM I     
Sbjct: 126 -----YFPTEVVYENSRNINEYFNTKAKLRIRETYIRKAIVSEDPSTGNFAVMAIYKTIN 180

Query: 209 T---LAVCRVGRVKKWYSVKGDIEG-NYNDIAIYNNEFYAVNDFGQVFV 75
           +   +A C+ G    W++++   +  +Y D+  +  +FYAV+D G+V +
Sbjct: 181 STENIAFCKSGDA-TWFTIQETSQKIHYQDVMFHRGKFYAVDDKGRVSI 228


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 64/245 (26%), Positives = 110/245 (44%), Gaps = 10/245 (4%)
 Frame = -2

Query: 737 DLVRFSCVCRPWRSHA--TPLLVPNLNLIPWLIIPYA--NYTCKITTNICDKTLGFFNIQ 570
           D VRF  VC  WR+    TP  +P    +PWL++P +  ++T +           FF++ 
Sbjct: 24  DYVRFRAVCHNWRASVPKTPHHLPTQ--LPWLMLPQSQPHHTHR----------PFFSLS 71

Query: 569 DGKTYKIDTPQLADRRICGSCSGGWLVTVHENSEIQVYHPFSKKVIELPPVTKLPGVTGC 390
             K + +  P+ + RR     S GWL+ + E  EI + +P ++  + LPP++  P V   
Sbjct: 72  LNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLPPLSTFPNVVRF 131

Query: 389 -FIDKRNELSYVVPNRPHFSYRVLEXXXXXXXXSEVRERYIYKAIM--SPSTG---IVMV 228
            F D   E          ++ R            ++R+ +I K I+  SP+ G   I +V
Sbjct: 132 NFADVGRE----------YALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGSDFIAVV 181

Query: 227 IQGRFRTLAVCRVGRVKKWYSVKGDIEGNYNDIAIYNNEFYAVNDFGQVFVVSSVDSGRP 48
           I  +   LA+CR  +    ++   D +    D+  +   FYAVN +G +  V  V    P
Sbjct: 182 ILNQTGDLALCR--KSDDSWTFLEDAQSYAEDVIFHRGLFYAVNKYGSI-AVCDVSGSSP 238

Query: 47  VIKLV 33
            + ++
Sbjct: 239 RVSII 243


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 64/245 (26%), Positives = 110/245 (44%), Gaps = 10/245 (4%)
 Frame = -2

Query: 737 DLVRFSCVCRPWRSHA--TPLLVPNLNLIPWLIIPYA--NYTCKITTNICDKTLGFFNIQ 570
           D VRF  VC  WR+    TP  +P    +PWL++P +  ++T +           FF++ 
Sbjct: 24  DYVRFRAVCHNWRASVPKTPHHLPTQ--LPWLMLPQSQPHHTHR----------PFFSLS 71

Query: 569 DGKTYKIDTPQLADRRICGSCSGGWLVTVHENSEIQVYHPFSKKVIELPPVTKLPGVTGC 390
             K + +  P+ + RR     S GWL+ + E  EI + +P ++  + LPP++  P V   
Sbjct: 72  LNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLPPLSTFPNVVRF 131

Query: 389 -FIDKRNELSYVVPNRPHFSYRVLEXXXXXXXXSEVRERYIYKAIM--SPSTG---IVMV 228
            F D   E          ++ R            ++R+ +I K I+  SP+ G   I +V
Sbjct: 132 NFADVGRE----------YALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGSDFIAVV 181

Query: 227 IQGRFRTLAVCRVGRVKKWYSVKGDIEGNYNDIAIYNNEFYAVNDFGQVFVVSSVDSGRP 48
           I  +   LA+CR  +    ++   D +    D+  +   FYAVN +G +  V  V    P
Sbjct: 182 ILNQTGDLALCR--KSDDSWTFLEDAQSYSEDVIFHRGLFYAVNKYGSI-AVCDVSGSSP 238

Query: 47  VIKLV 33
            + ++
Sbjct: 239 RVSII 243


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 62/246 (25%), Positives = 107/246 (43%), Gaps = 11/246 (4%)
 Frame = -2

Query: 737 DLVRFSCVCRPWRSHA--TPLLVPNLNLIPWLIIPYANYTCKITTNICDKTLGFFNIQDG 564
           D + F  VC  W+S    TP  +P    +PWL++P +                FFN+   
Sbjct: 25  DYLHFQAVCHAWKSSIPKTPNHLPPQ--LPWLLLPQSQSNQS-------SYRAFFNLSTY 75

Query: 563 KTYKIDTPQLADRRI-CGSCSGGWLVTVHENSEIQVYHPFSKKVIELPPVTKLPGVTGC- 390
           K + ++ P+ + R+  CGS S GWL+ + ++  I V +P +++ I LP ++  P V    
Sbjct: 76  KFHSLNLPEASHRKKHCGS-SHGWLIILDDSPSILVINPLTRRKIHLPAISSFPNVVSFD 134

Query: 389 FIDKRNELSYVVPNRPHFSYRVLEXXXXXXXXSEVRERYIYKAIMSPST-------GIVM 231
           + +   E   V P          +         ++R+ +I K +MS S         + M
Sbjct: 135 YANVGREYLLVNP----------QGERNTASLRQMRDGFIKKVVMSSSPLEKKGDFFVAM 184

Query: 230 VIQGRFRTLAVCRVGRVKKWYSVKGDIEGNYNDIAIYNNEFYAVNDFGQVFVVSSVDSGR 51
            I      LA C+ G   + +++  +      D+  +N  FYAVN  GQ+ VV  V+   
Sbjct: 185 AILCSTGDLAYCKNG--DECWNIVENSRSFSEDVIYFNGLFYAVNKAGQI-VVCDVNGNS 241

Query: 50  PVIKLV 33
           P +  +
Sbjct: 242 PKVSFI 247