BLASTX nr result

ID: Coptis23_contig00000385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000385
         (1130 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311585.1| predicted protein [Populus trichocarpa] gi|2...   130   5e-28
ref|XP_002322153.1| predicted protein [Populus trichocarpa] gi|2...   129   1e-27
ref|XP_002283493.1| PREDICTED: uncharacterized protein LOC100265...   128   3e-27
ref|XP_002268639.1| PREDICTED: uncharacterized protein LOC100250...   127   5e-27
emb|CAN79847.1| hypothetical protein VITISV_025958 [Vitis vinifera]   127   5e-27

>ref|XP_002311585.1| predicted protein [Populus trichocarpa] gi|222851405|gb|EEE88952.1|
           predicted protein [Populus trichocarpa]
          Length = 180

 Score =  130 bits (328), Expect = 5e-28
 Identities = 64/97 (65%), Positives = 78/97 (80%)
 Frame = -3

Query: 957 MGNCQAIDAASLVIQHPSGRVERFYWPLTVSEVMRMNQGHYVALVITLPALPSQEEKAVN 778
           MGNCQAIDAA+LVIQHPSG++ER YWP++VSEVMRMN GHYV+L+I LP    QE    N
Sbjct: 1   MGNCQAIDAAALVIQHPSGKIERLYWPVSVSEVMRMNPGHYVSLIIPLPVSGDQE----N 56

Query: 777 HGEGGGVRYTRVKLLRPTDSLVLGQAYRLITSEDVMK 667
                 V++TRVKLLRP+DSL LG AYRL+T+++VMK
Sbjct: 57  QEHIKTVQFTRVKLLRPSDSLTLGHAYRLVTTQEVMK 93


>ref|XP_002322153.1| predicted protein [Populus trichocarpa] gi|222869149|gb|EEF06280.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score =  129 bits (324), Expect = 1e-27
 Identities = 70/132 (53%), Positives = 91/132 (68%), Gaps = 4/132 (3%)
 Frame = -3

Query: 957 MGNCQAIDAASLVIQHPSGRVERFYWPLTVSEVMRMNQGHYVALVI--TLPALPSQEEKA 784
           MGNCQAIDAA+LVIQHP+G++E FYWP++ SEVM+ N GHYVAL++  TL    +   + 
Sbjct: 1   MGNCQAIDAATLVIQHPNGKIENFYWPVSASEVMKTNPGHYVALLLSTTLYDPTNNNGEC 60

Query: 783 VNHG--EGGGVRYTRVKLLRPTDSLVLGQAYRLITSEDVMKGLWEXXXXXXXXXXKEFQS 610
            N+G      +R TR+KLLRPTD+LVLG  YRLIT+++V KGLW            E  S
Sbjct: 61  PNNGTANNNSLRVTRIKLLRPTDTLVLGHVYRLITTQEVTKGLWAKKQAKLKKNDPE--S 118

Query: 609 TERPLERVQEKK 574
            E+P ERV+EK+
Sbjct: 119 EEKP-ERVKEKQ 129


>ref|XP_002283493.1| PREDICTED: uncharacterized protein LOC100265593 [Vitis vinifera]
           gi|297733829|emb|CBI15076.3| unnamed protein product
           [Vitis vinifera]
          Length = 184

 Score =  128 bits (321), Expect = 3e-27
 Identities = 63/100 (63%), Positives = 76/100 (76%)
 Frame = -3

Query: 957 MGNCQAIDAASLVIQHPSGRVERFYWPLTVSEVMRMNQGHYVALVITLPALPSQEEKAVN 778
           MGNCQAIDAA+LVIQ+P G+ ++ YWP++ SEVM+MN GHYVAL+IT    P+    A  
Sbjct: 1   MGNCQAIDAATLVIQYPCGKADKLYWPVSASEVMKMNPGHYVALLITTTLCPT---TATT 57

Query: 777 HGEGGGVRYTRVKLLRPTDSLVLGQAYRLITSEDVMKGLW 658
                 VR TRVKLLRPTD+LVLGQ YRLIT+E+VMK LW
Sbjct: 58  TTAPSSVRITRVKLLRPTDTLVLGQVYRLITAEEVMKALW 97


>ref|XP_002268639.1| PREDICTED: uncharacterized protein LOC100250100 [Vitis vinifera]
           gi|296086500|emb|CBI32089.3| unnamed protein product
           [Vitis vinifera]
          Length = 175

 Score =  127 bits (319), Expect = 5e-27
 Identities = 65/99 (65%), Positives = 77/99 (77%)
 Frame = -3

Query: 957 MGNCQAIDAASLVIQHPSGRVERFYWPLTVSEVMRMNQGHYVALVITLPALPSQEEKAVN 778
           MGNCQAIDAA+LVIQHP GR+ER YW ++  EVMRMN GHYV+L+I LP +P   +   N
Sbjct: 1   MGNCQAIDAAALVIQHPCGRIERLYWTVSAGEVMRMNPGHYVSLIIPLP-IPQDHDTPDN 59

Query: 777 HGEGGGVRYTRVKLLRPTDSLVLGQAYRLITSEDVMKGL 661
                 VR+TRVKLLRPTD+LVLG AYRLITS++VMK L
Sbjct: 60  K----TVRFTRVKLLRPTDTLVLGHAYRLITSQEVMKVL 94


>emb|CAN79847.1| hypothetical protein VITISV_025958 [Vitis vinifera]
          Length = 222

 Score =  127 bits (319), Expect = 5e-27
 Identities = 65/99 (65%), Positives = 77/99 (77%)
 Frame = -3

Query: 957 MGNCQAIDAASLVIQHPSGRVERFYWPLTVSEVMRMNQGHYVALVITLPALPSQEEKAVN 778
           MGNCQAIDAA+LVIQHP GR+ER YW ++  EVMRMN GHYV+L+I LP +P   +   N
Sbjct: 1   MGNCQAIDAAALVIQHPCGRIERLYWTVSAGEVMRMNPGHYVSLIIPLP-IPQDHDTPDN 59

Query: 777 HGEGGGVRYTRVKLLRPTDSLVLGQAYRLITSEDVMKGL 661
                 VR+TRVKLLRPTD+LVLG AYRLITS++VMK L
Sbjct: 60  K----TVRFTRVKLLRPTDTLVLGHAYRLITSQEVMKVL 94


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