BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000384
         (1419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285563.1| PREDICTED: tubulin alpha-2 chain [Vitis vini...   548   e-153
gb|AGG37283.1| alpha-tubulin 1 [Salix arbutifolia]                    546   e-153
ref|XP_002301128.1| tubulin alpha-1 chain [Populus trichocarpa] ...   546   e-153
sp|Q6VAF9.1|TBA4_GOSHI RecName: Full=Tubulin alpha-4 chain; AltN...   546   e-153
ref|XP_003522731.1| PREDICTED: tubulin alpha-1 chain-like [Glyci...   546   e-153

>ref|XP_002285563.1| PREDICTED: tubulin alpha-2 chain [Vitis vinifera]
            gi|147802483|emb|CAN77412.1| hypothetical protein
            VITISV_000470 [Vitis vinifera]
          Length = 451

 Score =  548 bits (1411), Expect = e-153
 Identities = 277/295 (93%), Positives = 277/295 (93%)
 Frame = -1

Query: 1419 VFNAVXXXXXXXXXXXXXXXXSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLE 1240
            VFNAV                SVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLE
Sbjct: 137  VFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLE 196

Query: 1239 HTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQ 1060
            HTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQ
Sbjct: 197  HTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQ 256

Query: 1059 TNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRRGKYMACC 880
            TNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPR GKYMACC
Sbjct: 257  TNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACC 316

Query: 879  LMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVC 700
            LMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVC
Sbjct: 317  LMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVC 376

Query: 699  MISNSTSVAEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKD 535
            MISNSTSVAEVFSRID KFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKD
Sbjct: 377  MISNSTSVAEVFSRIDNKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKD 431


>gb|AGG37283.1| alpha-tubulin 1 [Salix arbutifolia]
          Length = 451

 Score =  546 bits (1408), Expect = e-153
 Identities = 276/295 (93%), Positives = 277/295 (93%)
 Frame = -1

Query: 1419 VFNAVXXXXXXXXXXXXXXXXSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLE 1240
            VFNAV                SVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLE
Sbjct: 137  VFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLE 196

Query: 1239 HTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQ 1060
            HTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQ
Sbjct: 197  HTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQ 256

Query: 1059 TNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRRGKYMACC 880
            TNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPR GKYMACC
Sbjct: 257  TNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACC 316

Query: 879  LMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVC 700
            LMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVC
Sbjct: 317  LMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVC 376

Query: 699  MISNSTSVAEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKD 535
            MISNSTSVAEVFSRID KFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKD
Sbjct: 377  MISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKD 431


>ref|XP_002301128.1| tubulin alpha-1 chain [Populus trichocarpa]
            gi|29124983|gb|AAO63781.1| alpha-tubulin 1 [Populus
            tremuloides] gi|118488366|gb|ABK96001.1| unknown [Populus
            trichocarpa] gi|222842854|gb|EEE80401.1| tubulin alpha-1
            chain [Populus trichocarpa]
          Length = 451

 Score =  546 bits (1408), Expect = e-153
 Identities = 276/295 (93%), Positives = 277/295 (93%)
 Frame = -1

Query: 1419 VFNAVXXXXXXXXXXXXXXXXSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLE 1240
            VFNAV                SVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLE
Sbjct: 137  VFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLE 196

Query: 1239 HTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQ 1060
            HTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQ
Sbjct: 197  HTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQ 256

Query: 1059 TNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRRGKYMACC 880
            TNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPR GKYMACC
Sbjct: 257  TNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACC 316

Query: 879  LMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVC 700
            LMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVC
Sbjct: 317  LMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVC 376

Query: 699  MISNSTSVAEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKD 535
            MISNSTSVAEVFSRID KFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKD
Sbjct: 377  MISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKD 431


>sp|Q6VAF9.1|TBA4_GOSHI RecName: Full=Tubulin alpha-4 chain; AltName: Full=Alpha-4-tubulin
            gi|37529490|gb|AAQ92663.1| alpha-tubulin 4 [Gossypium
            hirsutum]
          Length = 450

 Score =  546 bits (1408), Expect = e-153
 Identities = 276/295 (93%), Positives = 277/295 (93%)
 Frame = -1

Query: 1419 VFNAVXXXXXXXXXXXXXXXXSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLE 1240
            VFNAV                SVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLE
Sbjct: 137  VFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLE 196

Query: 1239 HTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQ 1060
            HTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQ
Sbjct: 197  HTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQ 256

Query: 1059 TNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRRGKYMACC 880
            TNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPR GKYMACC
Sbjct: 257  TNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACC 316

Query: 879  LMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVC 700
            LMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVC
Sbjct: 317  LMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVC 376

Query: 699  MISNSTSVAEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKD 535
            MISNSTSVAEVFSRID KFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKD
Sbjct: 377  MISNSTSVAEVFSRIDHKFDLMYTKRAFVHWYVGEGMEEGEFSEAREDLAALEKD 431


>ref|XP_003522731.1| PREDICTED: tubulin alpha-1 chain-like [Glycine max]
          Length = 452

 Score =  546 bits (1408), Expect = e-153
 Identities = 276/295 (93%), Positives = 277/295 (93%)
 Frame = -1

Query: 1419 VFNAVXXXXXXXXXXXXXXXXSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLE 1240
            VFNAV                SVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLE
Sbjct: 137  VFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLE 196

Query: 1239 HTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQ 1060
            HTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQ
Sbjct: 197  HTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQ 256

Query: 1059 TNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRRGKYMACC 880
            TNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPR GKYMACC
Sbjct: 257  TNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACC 316

Query: 879  LMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVC 700
            LMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVC
Sbjct: 317  LMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVC 376

Query: 699  MISNSTSVAEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKD 535
            MISNSTSVAEVFSRID KFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKD
Sbjct: 377  MISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKD 431