BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000377
         (1752 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001782790.1| predicted protein [Physcomitrella patens sub...   757   0.0  
ref|XP_001777081.1| predicted protein [Physcomitrella patens sub...   757   0.0  
ref|XP_002285721.1| PREDICTED: tubulin alpha-1 chain [Vitis vini...   753   0.0  
ref|NP_197478.1| tubulin alpha-3/alpha-5 chain [Arabidopsis thal...   750   0.0  
gb|ACN40824.1| unknown [Picea sitchensis]                             749   0.0  

>ref|XP_001782790.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|168061676|ref|XP_001782813.1| predicted protein
            [Physcomitrella patens subsp. patens]
            gi|25396545|dbj|BAC24799.1| alpha tubulin [Physcomitrella
            patens] gi|162665692|gb|EDQ52367.1| predicted protein
            [Physcomitrella patens subsp. patens]
            gi|162665715|gb|EDQ52390.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 449

 Score =  757 bits (1954), Expect = 0.0
 Identities = 370/413 (89%), Positives = 382/413 (92%)
 Frame = -1

Query: 1590 DSCWELYCLEHGIQPDGQMPSDNTVGGADDAFNTFFSETGAGKHVPRAIFVDLEPTVIDE 1411
            ++CWELYCLEHGIQPDG+MPSD TVGG DDAFNTFFSETGAGKHVPRA+FVDLEPTVIDE
Sbjct: 18   NACWELYCLEHGIQPDGRMPSDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDE 77

Query: 1410 VRTGTYRQLFHPEQLITGKEDAANNFARGHYTIGKEIVDLCLDRVRKLADNCTGLQGFLV 1231
            VRTGTYRQLFHPEQLI+GKEDAANNFARGHYT+GKEIVDLCLDRVRKLADNCTGLQGFLV
Sbjct: 78   VRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLV 137

Query: 1230 FNAVXXXXXXXXXXXXXXXXSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEH 1051
            FNAV                SVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEH
Sbjct: 138  FNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEH 197

Query: 1050 TDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXLRFDGAINVDITEFQT 871
            TDVAVLLDNEAIYDICRRSLDIERPTYTNLNR            LRFDGA+NVDITEFQT
Sbjct: 198  TDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGALNVDITEFQT 257

Query: 870  NLVPYPRIHFMLSSYAPVISAEKAYHEQLSIPEITSAVFEPSSMMAKCDPRHGKYMACCL 691
            NLVPYPRIHFMLSSYAPVISAEKAYHEQLS+PEIT+AVFEPSSMMAKCDPRHGKYMACCL
Sbjct: 258  NLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCL 317

Query: 690  MYRGDVVPKDVNAAVSTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCM 511
            MYRGDVVPKDVNAAV+TIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCM
Sbjct: 318  MYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCM 377

Query: 510  ISNNTAVAEVFARIDFKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEK 352
            ISNNTAVAEVF+RID KFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEK
Sbjct: 378  ISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430


>ref|XP_001777081.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|162671524|gb|EDQ58074.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 449

 Score =  757 bits (1954), Expect = 0.0
 Identities = 370/413 (89%), Positives = 382/413 (92%)
 Frame = -1

Query: 1590 DSCWELYCLEHGIQPDGQMPSDNTVGGADDAFNTFFSETGAGKHVPRAIFVDLEPTVIDE 1411
            ++CWELYCLEHGIQPDG+MPSD TVGG DDAFNTFFSETGAGKHVPRA+FVDLEPTVIDE
Sbjct: 18   NACWELYCLEHGIQPDGRMPSDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDE 77

Query: 1410 VRTGTYRQLFHPEQLITGKEDAANNFARGHYTIGKEIVDLCLDRVRKLADNCTGLQGFLV 1231
            VRTGTYRQLFHPEQLI+GKEDAANNFARGHYT+GKEIVDLCLDRVRKLADNCTGLQGFLV
Sbjct: 78   VRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLV 137

Query: 1230 FNAVXXXXXXXXXXXXXXXXSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEH 1051
            FNAV                SVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEH
Sbjct: 138  FNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEH 197

Query: 1050 TDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXLRFDGAINVDITEFQT 871
            TDVAVLLDNEAIYDICRRSLDIERPTYTNLNR            LRFDGA+NVDITEFQT
Sbjct: 198  TDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGALNVDITEFQT 257

Query: 870  NLVPYPRIHFMLSSYAPVISAEKAYHEQLSIPEITSAVFEPSSMMAKCDPRHGKYMACCL 691
            NLVPYPRIHFMLSSYAPVISAEKAYHEQLS+PEIT+AVFEPSSMMAKCDPRHGKYMACCL
Sbjct: 258  NLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCL 317

Query: 690  MYRGDVVPKDVNAAVSTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCM 511
            MYRGDVVPKDVNAAV+TIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCM
Sbjct: 318  MYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCM 377

Query: 510  ISNNTAVAEVFARIDFKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEK 352
            ISNNTAVAEVF+RID KFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEK
Sbjct: 378  ISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430


>ref|XP_002285721.1| PREDICTED: tubulin alpha-1 chain [Vitis vinifera]
          Length = 449

 Score =  753 bits (1943), Expect = 0.0
 Identities = 371/413 (89%), Positives = 379/413 (91%)
 Frame = -1

Query: 1590 DSCWELYCLEHGIQPDGQMPSDNTVGGADDAFNTFFSETGAGKHVPRAIFVDLEPTVIDE 1411
            +SCWELYCLEHGIQPDG MPSD TVG   DAFNTFFSETGAGKHVPRAIFVDLEPTVIDE
Sbjct: 18   NSCWELYCLEHGIQPDGMMPSDTTVGVGHDAFNTFFSETGAGKHVPRAIFVDLEPTVIDE 77

Query: 1410 VRTGTYRQLFHPEQLITGKEDAANNFARGHYTIGKEIVDLCLDRVRKLADNCTGLQGFLV 1231
            VRTGTYRQLFHPEQLI+GKEDAANNFARGHYT+GKEIVDLCLDRVRKLADNCTGLQGFLV
Sbjct: 78   VRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLV 137

Query: 1230 FNAVXXXXXXXXXXXXXXXXSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEH 1051
            FNAV                SVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEH
Sbjct: 138  FNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEH 197

Query: 1050 TDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXLRFDGAINVDITEFQT 871
            TDVAVLLDNEAIYDICRRSLDIERPTYTNLNR            LRFDGAINVDITEFQT
Sbjct: 198  TDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQT 257

Query: 870  NLVPYPRIHFMLSSYAPVISAEKAYHEQLSIPEITSAVFEPSSMMAKCDPRHGKYMACCL 691
            NLVPYPRIHFMLSSYAPVISAEKAYHEQLS+PEIT+AVFEPSSMMAKCDPRHGKYMACCL
Sbjct: 258  NLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCL 317

Query: 690  MYRGDVVPKDVNAAVSTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCM 511
            MYRGDVVPKDVNAAV+TIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCM
Sbjct: 318  MYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCM 377

Query: 510  ISNNTAVAEVFARIDFKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEK 352
            ISNNTAVAEVF+RID KFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEK
Sbjct: 378  ISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430


>ref|NP_197478.1| tubulin alpha-3/alpha-5 chain [Arabidopsis thaliana]
            gi|15241179|ref|NP_197479.1| tubulin alpha-3/alpha-5
            chain [Arabidopsis thaliana]
            gi|297808045|ref|XP_002871906.1| tubulin alpha-3
            [Arabidopsis lyrata subsp. lyrata]
            gi|297812159|ref|XP_002873963.1| tubulin alpha-3
            [Arabidopsis lyrata subsp. lyrata]
            gi|408407916|sp|Q56WH1.2|TBA3_ARATH RecName: Full=Tubulin
            alpha-3 chain gi|408407918|sp|B9DHQ0.2|TBA5_ARATH
            RecName: Full=Tubulin alpha-5 chain
            gi|13605805|gb|AAK32888.1|AF367301_1 AT5g19770/T29J13_190
            [Arabidopsis thaliana] gi|166912|gb|AAA32888.1|
            alpha-tubulin [Arabidopsis thaliana]
            gi|166918|gb|AAA32891.1| alpha-5 tubulin [Arabidopsis
            thaliana] gi|14532776|gb|AAK64169.1| putative tubulin
            alpha-5 chain [Arabidopsis thaliana]
            gi|17473826|gb|AAL38340.1| unknown protein [Arabidopsis
            thaliana] gi|19310733|gb|AAL85097.1| putative tubulin
            alpha-5 chain [Arabidopsis thaliana]
            gi|23397154|gb|AAN31860.1| putative tubulin alpha-5 chain
            [Arabidopsis thaliana] gi|23397156|gb|AAN31861.1|
            putative tubulin alpha-5 chain [Arabidopsis thaliana]
            gi|23505949|gb|AAN28834.1| At5g19770/T29J13_190
            [Arabidopsis thaliana] gi|24899739|gb|AAN65084.1| unknown
            protein [Arabidopsis thaliana]
            gi|297317743|gb|EFH48165.1| tubulin alpha-3 [Arabidopsis
            lyrata subsp. lyrata] gi|297319800|gb|EFH50222.1| tubulin
            alpha-3 [Arabidopsis lyrata subsp. lyrata]
            gi|332005364|gb|AED92747.1| tubulin alpha-3/alpha-5 chain
            [Arabidopsis thaliana] gi|332005365|gb|AED92748.1|
            tubulin alpha-3/alpha-5 chain [Arabidopsis thaliana]
          Length = 450

 Score =  750 bits (1936), Expect = 0.0
 Identities = 369/413 (89%), Positives = 378/413 (91%)
 Frame = -1

Query: 1590 DSCWELYCLEHGIQPDGQMPSDNTVGGADDAFNTFFSETGAGKHVPRAIFVDLEPTVIDE 1411
            +SCWELYCLEHGIQPDG MPSD TVG A DAFNTFFSETGAGKHVPRA+FVDLEPTVIDE
Sbjct: 18   NSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKHVPRAVFVDLEPTVIDE 77

Query: 1410 VRTGTYRQLFHPEQLITGKEDAANNFARGHYTIGKEIVDLCLDRVRKLADNCTGLQGFLV 1231
            VRTGTYRQLFHPEQLI+GKEDAANNFARGHYT+GKEIVDLCLDRVRKLADNCTGLQGFLV
Sbjct: 78   VRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLV 137

Query: 1230 FNAVXXXXXXXXXXXXXXXXSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEH 1051
            FNAV                SVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEH
Sbjct: 138  FNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEH 197

Query: 1050 TDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXLRFDGAINVDITEFQT 871
            TDVAVLLDNEAIYDICRRSLDIERPTYTNLNR            LRFDGAINVDITEFQT
Sbjct: 198  TDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQT 257

Query: 870  NLVPYPRIHFMLSSYAPVISAEKAYHEQLSIPEITSAVFEPSSMMAKCDPRHGKYMACCL 691
            NLVPYPRIHFMLSSYAPVISA KAYHEQLS+PEIT+AVFEP+SMMAKCDPRHGKYMACCL
Sbjct: 258  NLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCL 317

Query: 690  MYRGDVVPKDVNAAVSTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCM 511
            MYRGDVVPKDVNAAV TIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCM
Sbjct: 318  MYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCM 377

Query: 510  ISNNTAVAEVFARIDFKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEK 352
            ISNNTAVAEVF+RID KFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEK
Sbjct: 378  ISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430


>gb|ACN40824.1| unknown [Picea sitchensis]
          Length = 449

 Score =  749 bits (1933), Expect = 0.0
 Identities = 367/413 (88%), Positives = 378/413 (91%)
 Frame = -1

Query: 1590 DSCWELYCLEHGIQPDGQMPSDNTVGGADDAFNTFFSETGAGKHVPRAIFVDLEPTVIDE 1411
            +SCWELYCLEHGIQPDG MPSD +VG  DDAFNTFFSETGAGKHVPRA+ VDLEPTVIDE
Sbjct: 18   NSCWELYCLEHGIQPDGMMPSDTSVGVGDDAFNTFFSETGAGKHVPRAVIVDLEPTVIDE 77

Query: 1410 VRTGTYRQLFHPEQLITGKEDAANNFARGHYTIGKEIVDLCLDRVRKLADNCTGLQGFLV 1231
            VRTG YRQLFHPEQLI+GKEDAANNFARGHYT+GKEIVDLCLDRVRKLADNCTGLQGFLV
Sbjct: 78   VRTGAYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLV 137

Query: 1230 FNAVXXXXXXXXXXXXXXXXSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEH 1051
            FNAV                SVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEH
Sbjct: 138  FNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEH 197

Query: 1050 TDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXLRFDGAINVDITEFQT 871
            TDVAVLLDNEAIYDICRRSLDIERPTYTNLNR            LRFDGAINVD+TEFQT
Sbjct: 198  TDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQT 257

Query: 870  NLVPYPRIHFMLSSYAPVISAEKAYHEQLSIPEITSAVFEPSSMMAKCDPRHGKYMACCL 691
            NLVPYPRIHFMLSSYAPVISAEKAYHEQLS+PEIT+AVFEPSSMMAKCDPRHGKYMACCL
Sbjct: 258  NLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCL 317

Query: 690  MYRGDVVPKDVNAAVSTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCM 511
            MYRGDVVPKDVNAAV+TIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCM
Sbjct: 318  MYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCM 377

Query: 510  ISNNTAVAEVFARIDFKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEK 352
            ISNNTAVAEVF+RID KFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEK
Sbjct: 378  ISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430