BLASTX nr result

ID: Coptis23_contig00000372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000372
         (878 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514543.1| conserved hypothetical protein [Ricinus comm...   116   8e-24
ref|XP_002315984.1| predicted protein [Populus trichocarpa] gi|2...   116   8e-24
gb|ABK95265.1| unknown [Populus trichocarpa]                          116   8e-24
ref|XP_002312357.1| predicted protein [Populus trichocarpa] gi|2...   114   2e-23
ref|XP_004149487.1| PREDICTED: uncharacterized protein LOC101216...   112   1e-22

>ref|XP_002514543.1| conserved hypothetical protein [Ricinus communis]
           gi|223546147|gb|EEF47649.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 269

 Score =  116 bits (290), Expect = 8e-24
 Identities = 58/107 (54%), Positives = 79/107 (73%), Gaps = 6/107 (5%)
 Frame = -1

Query: 482 VAKFILD-EINPEKVLILGSVQSRNYRGKLAPDEEMLFKLETLEEKKS-----GGDLMVK 321
           VAK ++  +I PE+VLIL S+QS+N+RGKL+PDE   FKLETL E+K      GG   +K
Sbjct: 124 VAKLLIGGQIIPERVLILDSIQSQNFRGKLSPDETHAFKLETLAERKGQVDGCGGSSFLK 183

Query: 320 GVDYFPSGSLIDGLGAAVLGQCQVRKIRGSLFVTWPDSSRGIVLKVK 180
           G++YFPSGS++DGL AA+L QCQ+R IRG+L V+WP+    ++  VK
Sbjct: 184 GLEYFPSGSMVDGLSAALLAQCQMRNIRGTLCVSWPEYGGSVIALVK 230



 Score = 77.0 bits (188), Expect = 5e-12
 Identities = 41/78 (52%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
 Frame = -3

Query: 858 MEDPLTEDPPPSRFFDEDLNNFTXXXXXXXXXXLHFTTP---TPLSPSLLIIAISTPSIH 688
           MED LTE PPPSRFF EDLNNF           L F+ P    PL PSLLIIA+STPS++
Sbjct: 1   MEDVLTEIPPPSRFFQEDLNNFASPLPPLPSPFLLFSNPKPDQPLCPSLLIIALSTPSLY 60

Query: 687 VINSLTQKSLLATLTLPD 634
           V N ++ K+L+ ++ LP+
Sbjct: 61  VFNHVSSKTLIGSVFLPE 78


>ref|XP_002315984.1| predicted protein [Populus trichocarpa] gi|222865024|gb|EEF02155.1|
           predicted protein [Populus trichocarpa]
          Length = 271

 Score =  116 bits (290), Expect = 8e-24
 Identities = 60/108 (55%), Positives = 81/108 (75%), Gaps = 7/108 (6%)
 Frame = -1

Query: 482 VAKFIL-DEINPEKVLILGSVQSRNYRGKLAPDEEMLFKLETLEEKKS------GGDLMV 324
           VAK ++ D+I P++VLI+ SVQS+N+RGKLAPDE  +FKLET  E+K       GG  ++
Sbjct: 124 VAKLLIGDQIIPKRVLIMDSVQSQNFRGKLAPDETYVFKLETSAERKGLDGDVCGGSSLL 183

Query: 323 KGVDYFPSGSLIDGLGAAVLGQCQVRKIRGSLFVTWPDSSRGIVLKVK 180
           KG+DYFPSGS++DGL AA+L +CQ+RKIRG+L V+WP     +V  VK
Sbjct: 184 KGLDYFPSGSVLDGLAAALLARCQMRKIRGTLCVSWPRYGVYVVAMVK 231



 Score = 73.2 bits (178), Expect = 8e-11
 Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
 Frame = -3

Query: 858 MEDPLTEDPPPSRFFDEDLNNFTXXXXXXXXXXLHFTTP---TPLSPSLLIIAISTPSIH 688
           MED LTE PPPSRFF EDL+NF           L F+ P    PL PSLLIIA+S+PS++
Sbjct: 1   MEDVLTELPPPSRFFQEDLDNFATPSPPLSSPSLLFSNPKPDQPLCPSLLIIALSSPSLY 60

Query: 687 VINSLTQKSLLATLTLPD 634
           + + ++ K+L+ +L LP+
Sbjct: 61  IFHHISSKTLIGSLVLPE 78


>gb|ABK95265.1| unknown [Populus trichocarpa]
          Length = 271

 Score =  116 bits (290), Expect = 8e-24
 Identities = 60/108 (55%), Positives = 81/108 (75%), Gaps = 7/108 (6%)
 Frame = -1

Query: 482 VAKFIL-DEINPEKVLILGSVQSRNYRGKLAPDEEMLFKLETLEEKKS------GGDLMV 324
           VAK ++ D+I P++VLI+ SVQS+N+RGKLAPDE  +FKLET  E+K       GG  ++
Sbjct: 124 VAKLLIGDQIIPKRVLIMDSVQSQNFRGKLAPDETYVFKLETSAERKGLDGDVCGGSSLL 183

Query: 323 KGVDYFPSGSLIDGLGAAVLGQCQVRKIRGSLFVTWPDSSRGIVLKVK 180
           KG+DYFPSGS++DGL AA+L +CQ+RKIRG+L V+WP     +V  VK
Sbjct: 184 KGLDYFPSGSVLDGLAAALLARCQMRKIRGTLCVSWPRYGVYVVAMVK 231



 Score = 73.2 bits (178), Expect = 8e-11
 Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
 Frame = -3

Query: 858 MEDPLTEDPPPSRFFDEDLNNFTXXXXXXXXXXLHFTTP---TPLSPSLLIIAISTPSIH 688
           MED LTE PPPSRFF EDL+NF           L F+ P    PL PSLLIIA+S+PS++
Sbjct: 1   MEDVLTELPPPSRFFQEDLDNFATPSPPLSSPSLLFSNPKPDQPLCPSLLIIALSSPSLY 60

Query: 687 VINSLTQKSLLATLTLPD 634
           + + ++ K+L+ +L LP+
Sbjct: 61  IFHHISSKTLIGSLVLPE 78


>ref|XP_002312357.1| predicted protein [Populus trichocarpa] gi|222852177|gb|EEE89724.1|
           predicted protein [Populus trichocarpa]
          Length = 271

 Score =  114 bits (286), Expect = 2e-23
 Identities = 59/107 (55%), Positives = 80/107 (74%), Gaps = 7/107 (6%)
 Frame = -1

Query: 482 VAKFIL-DEINPEKVLILGSVQSRNYRGKLAPDEEMLFKLETLEEKKS------GGDLMV 324
           VAK ++ D+I PE+VLIL SVQ++N+RG+LAPDE  +FKLET  E+K       GG  ++
Sbjct: 124 VAKLLIGDQIIPERVLILDSVQNQNFRGRLAPDEINVFKLETSAERKGLSDDGRGGSSLL 183

Query: 323 KGVDYFPSGSLIDGLGAAVLGQCQVRKIRGSLFVTWPDSSRGIVLKV 183
           KG+DYFPSGS++DGL AA+L +CQ+RKIRG+L V+WP     +V  V
Sbjct: 184 KGLDYFPSGSVLDGLAAALLARCQMRKIRGTLCVSWPRHGVSVVAMV 230



 Score = 63.9 bits (154), Expect = 5e-08
 Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
 Frame = -3

Query: 858 MEDPLTEDPPPSRFFDEDLNNFTXXXXXXXXXXLHFTT---PTPLSPSLLIIAISTPSIH 688
           M D LTE PP SRFF EDL+NF           L  T      PL PSLLIIA+S+PS++
Sbjct: 1   MGDVLTELPPSSRFFQEDLDNFATSSPPLSSPSLLLTNLKPDKPLHPSLLIIALSSPSLY 60

Query: 687 VINSLTQKSLLATLTLPD 634
           V + ++ K+L+ +L LP+
Sbjct: 61  VFHHISSKTLIGSLVLPE 78


>ref|XP_004149487.1| PREDICTED: uncharacterized protein LOC101216987 [Cucumis sativus]
           gi|449515621|ref|XP_004164847.1| PREDICTED:
           uncharacterized protein LOC101226906 [Cucumis sativus]
          Length = 266

 Score =  112 bits (279), Expect = 1e-22
 Identities = 56/107 (52%), Positives = 80/107 (74%), Gaps = 6/107 (5%)
 Frame = -1

Query: 482 VAKFILD-EINPEKVLILGSVQSRNYRGKLAPDEEMLFKLETLEEKK-----SGGDLMVK 321
           VAK +LD +I PE+VLIL S+QS+N+RGKL+PDE   FKLET  E K     + G  M+K
Sbjct: 124 VAKLLLDNKIIPERVLILDSLQSQNFRGKLSPDETFAFKLETSSESKRNDEGNDGSQMLK 183

Query: 320 GVDYFPSGSLIDGLGAAVLGQCQVRKIRGSLFVTWPDSSRGIVLKVK 180
           G+DY+PSGS++DGL AA+LG+CQ++ I+G+L V+WP+    ++  +K
Sbjct: 184 GLDYYPSGSVVDGLAAALLGRCQMKNIKGALCVSWPEYGSEVLSLLK 230



 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 39/78 (50%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
 Frame = -3

Query: 858 MEDPLTEDPPPSRFFDEDLNNFTXXXXXXXXXXLHFTTPTP---LSPSLLIIAISTPSIH 688
           MED LTE PPPSRFF +DLNNF           L F    P   L PSLL+IAIS+PS+H
Sbjct: 1   MEDVLTEIPPPSRFFQDDLNNFAPPSPSLPSPFLLFPKSKPNELLRPSLLVIAISSPSLH 60

Query: 687 VINSLTQKSLLATLTLPD 634
           +   L+ K+L+ +L LP+
Sbjct: 61  LFRHLSAKTLIGSLILPE 78


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