BLASTX nr result

ID: Coptis23_contig00000371 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000371
         (915 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283842.1| PREDICTED: translationally-controlled tumor ...   251   1e-64
emb|CBI39510.3| unnamed protein product [Vitis vinifera]              247   2e-63
ref|XP_002330214.1| predicted protein [Populus trichocarpa] gi|2...   246   5e-63
gb|ABA40450.1| P23 tumor protein-like protein [Solanum tuberosum...   245   1e-62
gb|ACJ84003.1| unknown [Medicago truncatula] gi|388498076|gb|AFK...   244   2e-62

>ref|XP_002283842.1| PREDICTED: translationally-controlled tumor protein homolog isoform
           1 [Vitis vinifera]
          Length = 197

 Score =  251 bits (642), Expect = 1e-64
 Identities = 126/174 (72%), Positives = 139/174 (79%)
 Frame = -3

Query: 844 LPTTANMLVYQDLLTGDELLSDSFPYKEIENGMLWEVEGKWVVQGAVDVNIGANPSAXXX 665
           + T  NMLVYQDLLTGDELLSDSFPYKEIENGMLWEVEGKWVVQGAVDV+IGANPSA   
Sbjct: 24  ISTPTNMLVYQDLLTGDELLSDSFPYKEIENGMLWEVEGKWVVQGAVDVDIGANPSAEGG 83

Query: 664 XXXXXXXXXXXXXXXXXXTFRLQEQPSFDKKQFLGFVKKYIKLLTPKLEGEQQEHFKKNI 485
                             TFRLQEQPSFDKKQF+ F+K+YIKLLTPKLE E+QE FKK+I
Sbjct: 84  GEDEGVEDQAVKVVDIVDTFRLQEQPSFDKKQFVTFMKRYIKLLTPKLEPEKQELFKKHI 143

Query: 484 EAAIKSLLPKLKEFQFFVGESMADDSSVVLAYYKEGSSDPTFIYFAHGLKEVKC 323
           E A K LLPKL + QFFVGESM DD S+V AYYKEG++DPTF+YFAHGLKE+KC
Sbjct: 144 EGATKFLLPKLSDLQFFVGESMHDDGSLVFAYYKEGATDPTFLYFAHGLKEIKC 197


>emb|CBI39510.3| unnamed protein product [Vitis vinifera]
          Length = 168

 Score =  247 bits (631), Expect = 2e-63
 Identities = 124/168 (73%), Positives = 136/168 (80%)
 Frame = -3

Query: 826 MLVYQDLLTGDELLSDSFPYKEIENGMLWEVEGKWVVQGAVDVNIGANPSAXXXXXXXXX 647
           MLVYQDLLTGDELLSDSFPYKEIENGMLWEVEGKWVVQGAVDV+IGANPSA         
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIENGMLWEVEGKWVVQGAVDVDIGANPSAEGGGEDEGV 60

Query: 646 XXXXXXXXXXXXTFRLQEQPSFDKKQFLGFVKKYIKLLTPKLEGEQQEHFKKNIEAAIKS 467
                       TFRLQEQPSFDKKQF+ F+K+YIKLLTPKLE E+QE FKK+IE A K 
Sbjct: 61  EDQAVKVVDIVDTFRLQEQPSFDKKQFVTFMKRYIKLLTPKLEPEKQELFKKHIEGATKF 120

Query: 466 LLPKLKEFQFFVGESMADDSSVVLAYYKEGSSDPTFIYFAHGLKEVKC 323
           LLPKL + QFFVGESM DD S+V AYYKEG++DPTF+YFAHGLKE+KC
Sbjct: 121 LLPKLSDLQFFVGESMHDDGSLVFAYYKEGATDPTFLYFAHGLKEIKC 168


>ref|XP_002330214.1| predicted protein [Populus trichocarpa] gi|222871670|gb|EEF08801.1|
           predicted protein [Populus trichocarpa]
          Length = 167

 Score =  246 bits (628), Expect = 5e-63
 Identities = 123/168 (73%), Positives = 137/168 (81%)
 Frame = -3

Query: 826 MLVYQDLLTGDELLSDSFPYKEIENGMLWEVEGKWVVQGAVDVNIGANPSAXXXXXXXXX 647
           MLVYQDLLTGDELLSDSFPYKEIENG+LWEVEGKWVVQG++DV+IGANPSA         
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIENGVLWEVEGKWVVQGSIDVDIGANPSAEGGDDEGVD 60

Query: 646 XXXXXXXXXXXXTFRLQEQPSFDKKQFLGFVKKYIKLLTPKLEGEQQEHFKKNIEAAIKS 467
                        FRLQEQP+FDKKQF+ ++K+YIKLLTPKLE EQQE FKKNIE A K 
Sbjct: 61  DQAVKVVDIVDT-FRLQEQPAFDKKQFVTYIKRYIKLLTPKLEPEQQEVFKKNIEGATKF 119

Query: 466 LLPKLKEFQFFVGESMADDSSVVLAYYKEGSSDPTFIYFAHGLKEVKC 323
           L PKLK+FQFFVGESM DD S+VLAYYKEG++DPTF+YFAHGLKEVKC
Sbjct: 120 LFPKLKDFQFFVGESMHDDCSLVLAYYKEGATDPTFLYFAHGLKEVKC 167


>gb|ABA40450.1| P23 tumor protein-like protein [Solanum tuberosum]
           gi|76161018|gb|ABA40472.1| P23-like protein [Solanum
           tuberosum]
          Length = 168

 Score =  245 bits (625), Expect = 1e-62
 Identities = 120/168 (71%), Positives = 138/168 (82%)
 Frame = -3

Query: 826 MLVYQDLLTGDELLSDSFPYKEIENGMLWEVEGKWVVQGAVDVNIGANPSAXXXXXXXXX 647
           MLVYQDLLTGDELLSDSFPYKE+ENGMLWEV+GKWVVQGAVDVNIGANPSA         
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKELENGMLWEVQGKWVVQGAVDVNIGANPSAEGGGEDEGV 60

Query: 646 XXXXXXXXXXXXTFRLQEQPSFDKKQFLGFVKKYIKLLTPKLEGEQQEHFKKNIEAAIKS 467
                       TFRLQEQP+FDKKQF+ ++K+YIK LTPKLEGE Q+ FKKNIE+A K 
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYIKRYIKNLTPKLEGEAQDAFKKNIESATKF 120

Query: 466 LLPKLKEFQFFVGESMADDSSVVLAYYKEGSSDPTFIYFAHGLKEVKC 323
           LLPKLK+FQFFVGESM+DDS++V A+YK+GS+DPTF+Y A GLKE+KC
Sbjct: 121 LLPKLKDFQFFVGESMSDDSALVFAFYKDGSADPTFLYLAPGLKEIKC 168


>gb|ACJ84003.1| unknown [Medicago truncatula] gi|388498076|gb|AFK37104.1| unknown
           [Medicago truncatula]
          Length = 168

 Score =  244 bits (624), Expect = 2e-62
 Identities = 122/168 (72%), Positives = 137/168 (81%)
 Frame = -3

Query: 826 MLVYQDLLTGDELLSDSFPYKEIENGMLWEVEGKWVVQGAVDVNIGANPSAXXXXXXXXX 647
           MLVYQDLLTGDELLSDSFPYKEIENGMLWEVEGKWVVQGAVDVNIGANPSA         
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIENGMLWEVEGKWVVQGAVDVNIGANPSAEGGDEDDGV 60

Query: 646 XXXXXXXXXXXXTFRLQEQPSFDKKQFLGFVKKYIKLLTPKLEGEQQEHFKKNIEAAIKS 467
                       TFRLQEQP+FDKKQF+ ++K+YIKLLT KLE E+QE FKK+IEAA K 
Sbjct: 61  DDQAVEVVDIVDTFRLQEQPTFDKKQFVTYMKRYIKLLTSKLEAEKQELFKKHIEAATKF 120

Query: 466 LLPKLKEFQFFVGESMADDSSVVLAYYKEGSSDPTFIYFAHGLKEVKC 323
           LLPKLK+ QFFVGESM DD S+V AYYK+G++DPTF+YFA+GLKE+KC
Sbjct: 121 LLPKLKDLQFFVGESMHDDGSLVFAYYKDGATDPTFLYFAYGLKEIKC 168


Top