BLASTX nr result

ID: Coptis23_contig00000350 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000350
         (1972 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146813.1| PREDICTED: dihydrolipoyllysine-residue acety...   719   0.0  
gb|ADN33731.1| dihydrolipoamide acetyltransferase component of p...   716   0.0  
ref|XP_002521371.1| dihydrolipoamide acetyltransferase component...   712   0.0  
emb|CBI27880.3| unnamed protein product [Vitis vinifera]              711   0.0  
ref|XP_002277871.1| PREDICTED: dihydrolipoyllysine-residue acety...   705   0.0  

>ref|XP_004146813.1| PREDICTED: dihydrolipoyllysine-residue acetyltransferase component 3
            of pyruvate dehydrogenase complex, mitochondrial-like
            [Cucumis sativus] gi|449476640|ref|XP_004154793.1|
            PREDICTED: dihydrolipoyllysine-residue acetyltransferase
            component 3 of pyruvate dehydrogenase complex,
            mitochondrial-like [Cucumis sativus]
          Length = 538

 Score =  719 bits (1857), Expect = 0.0
 Identities = 373/545 (68%), Positives = 435/545 (79%), Gaps = 14/545 (2%)
 Frame = +3

Query: 99   MTYASQLLRHSRKLRGAP------IVVRWFSKEARTSIDAGKDLLKVRQPNYLRAKRESV 260
            M YASQ++ HS+KLR  P       VVRWFS++A++SI    ++ K++   Y     ++ 
Sbjct: 1    MAYASQIINHSKKLRSTPKLLRQASVVRWFSEDAQSSIAKDNEIWKIQGCGY-----KAS 55

Query: 261  GFGGRPSMTGKLNMEIYSVSMQGHLARTSAVLSNTTSNSRAQTRGLSTDSGLPPHQEIGM 440
            G GG  ++    N   +    +G    T+++ +  + +     RG S+DSGLPPHQE+GM
Sbjct: 56   GKGGIKNLANFNNRSQFLQCQRGVSMMTTSIGNPFSGSQINPARGFSSDSGLPPHQEVGM 115

Query: 441  PSLSPTMTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEEGFLAKIIHGDGAKE 620
            PSLSPTMTEGNIARWLKKEGDK++PGEVLCEVETDKATVEMECMEEG+LAKII GDGAKE
Sbjct: 116  PSLSPTMTEGNIARWLKKEGDKISPGEVLCEVETDKATVEMECMEEGYLAKIICGDGAKE 175

Query: 621  IKVGEVIAITVEEEDDLGKFADFKPSSSGSGDXXXXXXXXXXXXXXXXX----RSSEPKV 788
            IKVGEVIAITVE+E+D+ KF D+KP+SS +G                      RS EPK 
Sbjct: 176  IKVGEVIAITVEDEEDIAKFKDYKPASSNTGAASAAESPASSPPKKEVVEEPVRSPEPKT 235

Query: 789  SKTDEAPQSGDRLFASPLARKLAEDHKVPLTSIKGTGPDGRIVKADIDDYLASSRKTVEP 968
             K    P +G+R+FASPLARKLAE++ VP++SIKGTGPDG IVKADI+DYLAS  K  E 
Sbjct: 236  VKQSPPPPAGERIFASPLARKLAEENNVPISSIKGTGPDGSIVKADIEDYLASRGK--ES 293

Query: 969  QVSKAKDT----LDYSDLPHSQIRKITASRLLLSKQTIPHYYLTVDTCVDKLMDLRNDLN 1136
               KAKD     LDYSDLPH+QIRKITASRLL SKQTIPHYYLTVDTCVDKLMDLRN LN
Sbjct: 294  TAPKAKDAAGAPLDYSDLPHTQIRKITASRLLFSKQTIPHYYLTVDTCVDKLMDLRNQLN 353

Query: 1137 SLQEASGGKRISVNDLVIKAAALALRKVPQCNSSWTNDYIRQFKSVNINVAVQTENGLYV 1316
            +LQEASGGKRISVNDLVIKAAALAL+KVPQCNSSWT++YIRQ+ +VNINVAVQT+NGL+V
Sbjct: 354  ALQEASGGKRISVNDLVIKAAALALKKVPQCNSSWTDNYIRQYHNVNINVAVQTDNGLFV 413

Query: 1317 PVIRDADKKGLSTISEEVKFLAGKARDNSLKPEDYEGGTFTVSNLGGPFGIKQFCAIINP 1496
            PVIRDADKKGLS IS+EVK LA KARDN+LKPEDYEGGTFTVSNLGGPFGIKQFCAIINP
Sbjct: 414  PVIRDADKKGLSAISDEVKKLAQKARDNTLKPEDYEGGTFTVSNLGGPFGIKQFCAIINP 473

Query: 1497 PQAGILAVGSAEKRVVPGTGSDQFSFASFMSVTLSCDHRVIDGAIGAEWLKSFKGYVENP 1676
            PQ+GILAVGSAEKRV+PG+G+ +F FASFMSVTLSCDHRVIDGAIGA+WLK+FKG++ENP
Sbjct: 474  PQSGILAVGSAEKRVIPGSGAQEFKFASFMSVTLSCDHRVIDGAIGADWLKAFKGFIENP 533

Query: 1677 ESMLL 1691
            ESMLL
Sbjct: 534  ESMLL 538


>gb|ADN33731.1| dihydrolipoamide acetyltransferase component of pyruvate
            dehydrogenase [Cucumis melo subsp. melo]
          Length = 536

 Score =  716 bits (1848), Expect = 0.0
 Identities = 374/546 (68%), Positives = 436/546 (79%), Gaps = 15/546 (2%)
 Frame = +3

Query: 99   MTYASQLLRHSRKLRGAP------IVVRWFSKEARTSIDAGKDLLKVRQPNYLRAKRESV 260
            M YASQ++ HS+KLR  P       +VRWFS++A++SID   ++ K++   Y     ++ 
Sbjct: 1    MAYASQIINHSKKLRSTPKLFRQASMVRWFSEDAQSSID--NEIWKIQGSGY-----KAS 53

Query: 261  GFGGRPSMTGKLNMEIYSVSMQGHLARTSAVLSNTTSNSRAQ-TRGLSTDSGLPPHQEIG 437
            G GG  ++    N   + +  +G ++  +  + N  S S+    RG S+DSGLPPHQE+G
Sbjct: 54   GKGGIKNLANFNNRSQFLICQRG-VSMMATSIGNPFSGSQINPARGFSSDSGLPPHQEVG 112

Query: 438  MPSLSPTMTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEEGFLAKIIHGDGAK 617
            MPSLSPTMTEGNIARWLKKEGDK++PGEVLCEVETDKATVEMECMEEG+LAKII GDGAK
Sbjct: 113  MPSLSPTMTEGNIARWLKKEGDKISPGEVLCEVETDKATVEMECMEEGYLAKIICGDGAK 172

Query: 618  EIKVGEVIAITVEEEDDLGKFADFKPSSSGSG----DXXXXXXXXXXXXXXXXXRSSEPK 785
            EIKVGEVIAITVE+E+D+ KF D+KP+SS +G                      RS +P 
Sbjct: 173  EIKVGEVIAITVEDEEDIAKFKDYKPTSSNTGAASAPESPAPSPPKKEVVEEPVRSPQPS 232

Query: 786  VSKTDEAPQSGDRLFASPLARKLAEDHKVPLTSIKGTGPDGRIVKADIDDYLASSRKTVE 965
              K      +G+R+FASPLARKLAE++ VP++SIKGTGPDG IVKADI+DYLAS  K  E
Sbjct: 233  TVKQSPPSPAGERIFASPLARKLAEENNVPISSIKGTGPDGSIVKADIEDYLASRGK--E 290

Query: 966  PQVSKAKDT----LDYSDLPHSQIRKITASRLLLSKQTIPHYYLTVDTCVDKLMDLRNDL 1133
                KAKD     LDYSDLPH+QIRK+TASRLL SKQTIPHYYLTVDTCVDKLMDLRN L
Sbjct: 291  STAPKAKDAAGAPLDYSDLPHTQIRKVTASRLLFSKQTIPHYYLTVDTCVDKLMDLRNQL 350

Query: 1134 NSLQEASGGKRISVNDLVIKAAALALRKVPQCNSSWTNDYIRQFKSVNINVAVQTENGLY 1313
            N+LQEASGGKRISVNDLVIKAAALALRKVPQCNSSWT++YIRQ+ +VNINVAVQT+NGL+
Sbjct: 351  NALQEASGGKRISVNDLVIKAAALALRKVPQCNSSWTDNYIRQYHNVNINVAVQTDNGLF 410

Query: 1314 VPVIRDADKKGLSTISEEVKFLAGKARDNSLKPEDYEGGTFTVSNLGGPFGIKQFCAIIN 1493
            VPVIRDADKKGLSTIS EVK LA KARDN+LKPEDYEGGTFTVSNLGGPFGIKQFCAIIN
Sbjct: 411  VPVIRDADKKGLSTISNEVKKLAQKARDNTLKPEDYEGGTFTVSNLGGPFGIKQFCAIIN 470

Query: 1494 PPQAGILAVGSAEKRVVPGTGSDQFSFASFMSVTLSCDHRVIDGAIGAEWLKSFKGYVEN 1673
            PPQ+GILAVGSAEKRV+PG+G+ +F FASFMSVTLSCDHRVIDGAIGA+WLK+FKGY+EN
Sbjct: 471  PPQSGILAVGSAEKRVIPGSGAQEFKFASFMSVTLSCDHRVIDGAIGADWLKAFKGYIEN 530

Query: 1674 PESMLL 1691
            PESMLL
Sbjct: 531  PESMLL 536


>ref|XP_002521371.1| dihydrolipoamide acetyltransferase component of pyruvate
            dehydrogenase, putative [Ricinus communis]
            gi|223539449|gb|EEF41039.1| dihydrolipoamide
            acetyltransferase component of pyruvate dehydrogenase,
            putative [Ricinus communis]
          Length = 543

 Score =  712 bits (1839), Expect = 0.0
 Identities = 373/544 (68%), Positives = 422/544 (77%), Gaps = 13/544 (2%)
 Frame = +3

Query: 99   MTYASQLLRHSRKLRGAPIV--------VRWFSKEARTSIDAGKDLLKVRQPNYLRAKRE 254
            M YAS ++ HS+KLR    +        VRWFS + R S+    D  KV    ++ A+RE
Sbjct: 1    MAYASHIINHSKKLRNVSNLLRQEHAGLVRWFSNDTRLSVGKKDDTAKVHHQGFVPAERE 60

Query: 255  ---SVGFGGRPSMTGKLNMEIYSVSMQGHLARTSAVLSNTTSNSRAQTR-GLSTDSGLPP 422
               + G     S  G     +     Q       ++L    S+S+ Q+R G S+DSGLPP
Sbjct: 61   RLFNTGVNNNISSFGAFRKNVPRTIKQVRNPMDGSLLLKDFSSSQVQSRRGFSSDSGLPP 120

Query: 423  HQEIGMPSLSPTMTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEEGFLAKIIH 602
            HQEIGMPSLSPTMTEGNIARWLKKEGDK++PGEVLCEVETDKATVEMECMEEGFLAKII 
Sbjct: 121  HQEIGMPSLSPTMTEGNIARWLKKEGDKISPGEVLCEVETDKATVEMECMEEGFLAKIIK 180

Query: 603  GDGAKEIKVGEVIAITVEEEDDLGKFADFKPSSSGSGDXXXXXXXXXXXXXXXXXRSSEP 782
            GDG+KEIKVGEVIAITVE+E+D+GKF D+ PS S                      S EP
Sbjct: 181  GDGSKEIKVGEVIAITVEDEEDIGKFKDYSPSVSDGAAAASPPPPSKKEVAEETVSSPEP 240

Query: 783  KVSKTDEAPQSGDRLFASPLARKLAEDHKVPLTSIKGTGPDGRIVKADIDDYLASSRKTV 962
            K SK   A  SGDR+FASPLA+KLAEDH V L+SIKGTGPDG IVKADI+DYLAS  K V
Sbjct: 241  KTSKPSAA-SSGDRIFASPLAKKLAEDHNVTLSSIKGTGPDGHIVKADIEDYLASRGKEV 299

Query: 963  EPQVSKAKD-TLDYSDLPHSQIRKITASRLLLSKQTIPHYYLTVDTCVDKLMDLRNDLNS 1139
                 KA   ++DY D+PH+QIRK+TASRLLLSKQTIPHYYLTVDT VDKLMDLR  LNS
Sbjct: 300  SATTPKATAASIDYVDIPHTQIRKVTASRLLLSKQTIPHYYLTVDTRVDKLMDLRGKLNS 359

Query: 1140 LQEASGGKRISVNDLVIKAAALALRKVPQCNSSWTNDYIRQFKSVNINVAVQTENGLYVP 1319
            LQEASGGKRISVNDLVIKAAALAL++VPQCNSSWT++YIRQ+ +VNINVAVQT+NGLYVP
Sbjct: 360  LQEASGGKRISVNDLVIKAAALALKRVPQCNSSWTDNYIRQYNNVNINVAVQTDNGLYVP 419

Query: 1320 VIRDADKKGLSTISEEVKFLAGKARDNSLKPEDYEGGTFTVSNLGGPFGIKQFCAIINPP 1499
            V+RDADKKGLS I+EEVK LA KA+DNSLKPEDYEGGTFTVSNLGGPFGIKQFCAIINPP
Sbjct: 420  VVRDADKKGLSKIAEEVKHLAQKAKDNSLKPEDYEGGTFTVSNLGGPFGIKQFCAIINPP 479

Query: 1500 QAGILAVGSAEKRVVPGTGSDQFSFASFMSVTLSCDHRVIDGAIGAEWLKSFKGYVENPE 1679
            Q+GILAVGSAEKRV+PG+G D+F FASFM VTLSCDHRVIDGAIGAEWLK+FKGY+ENPE
Sbjct: 480  QSGILAVGSAEKRVIPGSGPDEFKFASFMLVTLSCDHRVIDGAIGAEWLKAFKGYIENPE 539

Query: 1680 SMLL 1691
            SMLL
Sbjct: 540  SMLL 543


>emb|CBI27880.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score =  711 bits (1836), Expect = 0.0
 Identities = 369/549 (67%), Positives = 432/549 (78%), Gaps = 18/549 (3%)
 Frame = +3

Query: 99   MTYASQLLRHSRKLRGAP--------IVVRWFSKEARTSIDAGKDLLKVRQPNYLRAKRE 254
            M YAS+ L HSRK+R A         I+VRWFS    +SI  G DL+++R+  +  +  +
Sbjct: 1    MLYASRFLTHSRKIRNASNVLRSEPAILVRWFSGGTCSSIGKGDDLIEIRRRGF-NSSTD 59

Query: 255  SVGFGGRPSMTGKLNMEIYSVSMQGHLARTSAVLS----NTTSNSRAQT---RGLSTDSG 413
             +  G   ++   + +  +     G+++R +  +      + SN   Q    RG +TD+G
Sbjct: 60   GLLSGVNRAVDPNIYIVGWVRGFNGNISRMAKTMGIPVVGSISNKSLQMHLIRGFATDAG 119

Query: 414  LPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEEGFLAK 593
            LPPHQEIGMPSLSPTMTEGNIARWLKKEGDK++PGEVLCEVETDKATVEMECMEEG+LAK
Sbjct: 120  LPPHQEIGMPSLSPTMTEGNIARWLKKEGDKISPGEVLCEVETDKATVEMECMEEGYLAK 179

Query: 594  IIHGDGAKEIKVGEVIAITVEEEDDLGKFADFKPSSSGSGDXXXXXXXXXXXXXXXXXR- 770
            I+ GDGAKEIKVG+VIAITVEEEDD+ KF  ++    G+ D                 + 
Sbjct: 180  IVLGDGAKEIKVGQVIAITVEEEDDIAKFKGYEAPKGGAADGGKKSSASPPPMKEVAEKP 239

Query: 771  --SSEPKVSKTDEAPQSGDRLFASPLARKLAEDHKVPLTSIKGTGPDGRIVKADIDDYLA 944
              S +P VSK  E+ ++GDR+F+SPLA+KLAEDH VPL SIKGTGPDGRIVKADI+DYLA
Sbjct: 240  ASSPQPNVSKAVESSKAGDRIFSSPLAKKLAEDHNVPLQSIKGTGPDGRIVKADIEDYLA 299

Query: 945  SSRKTVEPQVSKAKDTLDYSDLPHSQIRKITASRLLLSKQTIPHYYLTVDTCVDKLMDLR 1124
            S  K      S+A  TLDY+DLPH+QIRK+TASRLLLSKQTIPHYYLTVDTCVDKLM+LR
Sbjct: 300  SYGKEATTPFSEAA-TLDYTDLPHTQIRKVTASRLLLSKQTIPHYYLTVDTCVDKLMELR 358

Query: 1125 NDLNSLQEASGGKRISVNDLVIKAAALALRKVPQCNSSWTNDYIRQFKSVNINVAVQTEN 1304
            + LN+LQEASGGKRISVNDLVIKAAALALRKVPQCNSSWTNDYIRQ+ +VNINVAVQT+N
Sbjct: 359  SQLNTLQEASGGKRISVNDLVIKAAALALRKVPQCNSSWTNDYIRQYHNVNINVAVQTDN 418

Query: 1305 GLYVPVIRDADKKGLSTISEEVKFLAGKARDNSLKPEDYEGGTFTVSNLGGPFGIKQFCA 1484
            GLYVPV+RDADKKGLS I+EE+K LA KA+DNSLK EDYEGGTFTVSNLGGPFG+KQFCA
Sbjct: 419  GLYVPVVRDADKKGLSKIAEEIKHLAQKAKDNSLKSEDYEGGTFTVSNLGGPFGVKQFCA 478

Query: 1485 IINPPQAGILAVGSAEKRVVPGTGSDQFSFASFMSVTLSCDHRVIDGAIGAEWLKSFKGY 1664
            IINPPQ+GILAVGSAEKRV+PG G DQF +ASFM VTLSCDHRVIDGAIGAEWLK+FKGY
Sbjct: 479  IINPPQSGILAVGSAEKRVIPGVGPDQFKYASFMPVTLSCDHRVIDGAIGAEWLKAFKGY 538

Query: 1665 VENPESMLL 1691
            +ENPESMLL
Sbjct: 539  IENPESMLL 547


>ref|XP_002277871.1| PREDICTED: dihydrolipoyllysine-residue acetyltransferase component 3
            of pyruvate dehydrogenase complex, mitochondrial [Vitis
            vinifera] gi|297743048|emb|CBI35915.3| unnamed protein
            product [Vitis vinifera]
          Length = 555

 Score =  705 bits (1819), Expect = 0.0
 Identities = 377/558 (67%), Positives = 422/558 (75%), Gaps = 27/558 (4%)
 Frame = +3

Query: 99   MTYASQLLRHSRKLRGAP--------IVVRWFSKEARTSIDAGKDLLKVRQPNYLRAKRE 254
            MTY S++  HS+KLR AP         +VRWFS +AR     G D+LK+    Y      
Sbjct: 1    MTYTSRVFNHSKKLRNAPNLLRQEHSTLVRWFSNKARPFSSKGDDILKIPGERYRDCNSP 60

Query: 255  SVGFGGRP---------SMTGKLNMEIYSVSMQGHLARTSAVLSNTTSNSRAQTR-GLST 404
            S                +  G     +   +M+  +  T ++LS   S S    R G S+
Sbjct: 61   STASFSHTYRAINTDTITSLGIFEGNVSRTAMKMGIPVTGSLLSKGFSGSCMHLRRGFSS 120

Query: 405  DSGLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEEGF 584
            DSGLP HQ+IGMPSLSPTMTEGNIARWLKKEGDK++PGEVLCEVETDKATVEMECMEEG+
Sbjct: 121  DSGLPAHQKIGMPSLSPTMTEGNIARWLKKEGDKISPGEVLCEVETDKATVEMECMEEGY 180

Query: 585  LAKIIHGDGAKEIKVGEVIAITVEEEDDLGKFADFKPS-------SSGSGDXXXXXXXXX 743
            LAKII GDGAKEIKVGEVIAITVEEE+D+ KF D+KPS       S GS D         
Sbjct: 181  LAKIIQGDGAKEIKVGEVIAITVEEEEDIAKFKDYKPSPSDAAAESKGSSDSTPPKKEEV 240

Query: 744  XXXXXXXXRSSEPKVSKTDEAPQSGDRLFASPLARKLAEDHKVPLTSIKGTGPDGRIVKA 923
                     S EPK SK   AP +  R+FASPLARKLAE+H VPL+SIKGTG  G IVKA
Sbjct: 241  KEEPTS---SPEPKSSKASAAPSTEGRIFASPLARKLAEEHNVPLSSIKGTGTGGSIVKA 297

Query: 924  DIDDYLASSRKTVEPQVSKAKDT--LDYSDLPHSQIRKITASRLLLSKQTIPHYYLTVDT 1097
            DI+DYLAS  K       K  DT  LDY+DLPHSQIRKITASRLLLSKQTIPHYYLTVDT
Sbjct: 298  DIEDYLASRGKEGSLTAPKVTDTMALDYTDLPHSQIRKITASRLLLSKQTIPHYYLTVDT 357

Query: 1098 CVDKLMDLRNDLNSLQEASGGKRISVNDLVIKAAALALRKVPQCNSSWTNDYIRQFKSVN 1277
            CVDKLMDLR+ LNS+QEASGGKRIS+NDLVIKAAALALRKVPQCNSSWTNDYIRQ+ +VN
Sbjct: 358  CVDKLMDLRSQLNSIQEASGGKRISINDLVIKAAALALRKVPQCNSSWTNDYIRQYHNVN 417

Query: 1278 INVAVQTENGLYVPVIRDADKKGLSTISEEVKFLAGKARDNSLKPEDYEGGTFTVSNLGG 1457
            INVAVQT+NGL+VPVI+DADKKGLS ISEEVK LA KA++N+LKP DYEGGTFTVSNLGG
Sbjct: 418  INVAVQTDNGLFVPVIKDADKKGLSKISEEVKQLAQKAKENNLKPVDYEGGTFTVSNLGG 477

Query: 1458 PFGIKQFCAIINPPQAGILAVGSAEKRVVPGTGSDQFSFASFMSVTLSCDHRVIDGAIGA 1637
            PFGIKQFCAIINPPQ+GILA+GSA+KRVVPGTG D+F FASFMSVTLSCDHRVIDGAIGA
Sbjct: 478  PFGIKQFCAIINPPQSGILAIGSADKRVVPGTGPDEFKFASFMSVTLSCDHRVIDGAIGA 537

Query: 1638 EWLKSFKGYVENPESMLL 1691
            EWLK+FK Y+ENPESMLL
Sbjct: 538  EWLKAFKSYIENPESMLL 555


Top