BLASTX nr result

ID: Coptis23_contig00000348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000348
         (1093 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF06489.1| ribosomal protein L10a [Elaeis guineensis]             362   9e-98
gb|ABK22320.1| unknown [Picea sitchensis]                             362   1e-97
ref|NP_001236946.1| uncharacterized protein LOC100305550 [Glycin...   360   3e-97
ref|XP_002282641.1| PREDICTED: 60S ribosomal protein L10a-1-like...   359   6e-97
gb|ABK22290.1| unknown [Picea sitchensis] gi|148908521|gb|ABR173...   359   8e-97

>gb|ACF06489.1| ribosomal protein L10a [Elaeis guineensis]
          Length = 216

 Score =  362 bits (929), Expect = 9e-98
 Identities = 181/216 (83%), Positives = 190/216 (87%)
 Frame = +3

Query: 135 MSKLQSDVLREGITQIVTAAKEKKRKFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 314
           MSKLQSDVLRE I+QI   ++EKKR F ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDVLREAISQITNDSREKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 315 KMKVCMLGDAQHVEEAEKMGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIP 494
           KMKVCMLGDAQHVEEAEK+GLDYMDVE                  YHAFLASEA+IKQIP
Sbjct: 61  KMKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 495 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNLGMDEKQIFQ 674
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGN  M+EKQIFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNCAMEEKQIFQ 180

Query: 675 NVQLSVNFLVSLLKKNWQNVRCLYLKSSMGKPYRIF 782
           NVQLSVNFLVSLLKKNWQNVRCLYLKS+MGKPYR+F
Sbjct: 181 NVQLSVNFLVSLLKKNWQNVRCLYLKSTMGKPYRVF 216


>gb|ABK22320.1| unknown [Picea sitchensis]
          Length = 216

 Score =  362 bits (928), Expect = 1e-97
 Identities = 179/216 (82%), Positives = 192/216 (88%)
 Frame = +3

Query: 135 MSKLQSDVLREGITQIVTAAKEKKRKFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 314
           MSKLQSDVLREGITQ++  +K+KKRKF ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDVLREGITQVMGESKDKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 315 KMKVCMLGDAQHVEEAEKMGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIP 494
           KMKVCMLGDAQH+EEAEK+ LDYMDVEG                 YHAFLASEA+IKQIP
Sbjct: 61  KMKVCMLGDAQHIEEAEKISLDYMDVEGLKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 495 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNLGMDEKQIFQ 674
           RLLGPGLNKAGKFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN GM+EKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNCGMEEKQVFQ 180

Query: 675 NVQLSVNFLVSLLKKNWQNVRCLYLKSSMGKPYRIF 782
           NVQLSVNFLVSLLKKNWQNVRCLYLKS+MGKP R+F
Sbjct: 181 NVQLSVNFLVSLLKKNWQNVRCLYLKSTMGKPARVF 216


>ref|NP_001236946.1| uncharacterized protein LOC100305550 [Glycine max]
           gi|255625879|gb|ACU13284.1| unknown [Glycine max]
          Length = 216

 Score =  360 bits (925), Expect = 3e-97
 Identities = 181/216 (83%), Positives = 191/216 (88%)
 Frame = +3

Query: 135 MSKLQSDVLREGITQIVTAAKEKKRKFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 314
           MSKLQSD LRE I+ I+T +KEK RKFVET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISGIMTDSKEKNRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 315 KMKVCMLGDAQHVEEAEKMGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIP 494
           KMK+CMLGDAQHVEEAEK+GLDYMDVE                  YHAFLASEAVIKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKIGLDYMDVEALKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 495 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNLGMDEKQIFQ 674
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGN+ M+EKQIFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQIFQ 180

Query: 675 NVQLSVNFLVSLLKKNWQNVRCLYLKSSMGKPYRIF 782
           NVQLSVNFLVSLLKKNWQNVRCLYLKS+MGK YR+F
Sbjct: 181 NVQLSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216


>ref|XP_002282641.1| PREDICTED: 60S ribosomal protein L10a-1-like [Vitis vinifera]
          Length = 216

 Score =  359 bits (922), Expect = 6e-97
 Identities = 182/216 (84%), Positives = 190/216 (87%)
 Frame = +3

Query: 135 MSKLQSDVLREGITQIVTAAKEKKRKFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 314
           MSKLQS+ LRE ITQIV  AKEKKR F+ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAITQIVGDAKEKKRNFIETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 315 KMKVCMLGDAQHVEEAEKMGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIP 494
           KMK+CMLGDAQHVEEAEK+GL+YMDVEG                 YHAFLASEAVIKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 495 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNLGMDEKQIFQ 674
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGN  M+EKQIFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNCSMEEKQIFQ 180

Query: 675 NVQLSVNFLVSLLKKNWQNVRCLYLKSSMGKPYRIF 782
           NVQLSVNFLVSLLKKNWQNVRCLYLKS+MGK  RIF
Sbjct: 181 NVQLSVNFLVSLLKKNWQNVRCLYLKSTMGKSNRIF 216


>gb|ABK22290.1| unknown [Picea sitchensis] gi|148908521|gb|ABR17372.1| unknown
           [Picea sitchensis]
          Length = 216

 Score =  359 bits (921), Expect = 8e-97
 Identities = 179/216 (82%), Positives = 191/216 (88%)
 Frame = +3

Query: 135 MSKLQSDVLREGITQIVTAAKEKKRKFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 314
           MSKLQSDVLRE I+Q++  +KEK+RKF ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDVLREAISQVMADSKEKQRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 315 KMKVCMLGDAQHVEEAEKMGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIP 494
           KMKVCMLGDAQHVEEAEK+GLDYMDVEG                 YHAFLASEA+IKQIP
Sbjct: 61  KMKVCMLGDAQHVEEAEKLGLDYMDVEGLKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 495 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNLGMDEKQIFQ 674
           RLLGPGLNKAGKFPTLV+HQESLE KVNETKA VKFQLKKVLCMGVAVGN GM+EKQIFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLEGKVNETKATVKFQLKKVLCMGVAVGNCGMEEKQIFQ 180

Query: 675 NVQLSVNFLVSLLKKNWQNVRCLYLKSSMGKPYRIF 782
           NVQLSVNFLVSLLKKNWQNVRCLYLK++MGKP RIF
Sbjct: 181 NVQLSVNFLVSLLKKNWQNVRCLYLKTTMGKPNRIF 216


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