BLASTX nr result

ID: Coptis23_contig00000330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00000330
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67976.1| hypothetical protein VITISV_028700 [Vitis vinifera]    59   7e-07
emb|CAN69161.1| hypothetical protein VITISV_031554 [Vitis vinifera]    57   2e-06
ref|XP_002278676.2| PREDICTED: probable disease resistance prote...    56   3e-06
ref|XP_002278659.1| PREDICTED: disease resistance protein RFL1 [...    56   3e-06
ref|XP_002514137.1| leucine-rich repeat-containing protein 2, lr...    55   8e-06

>emb|CAN67976.1| hypothetical protein VITISV_028700 [Vitis vinifera]
          Length = 853

 Score = 58.5 bits (140), Expect = 7e-07
 Identities = 36/108 (33%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
 Frame = +1

Query: 154 YIKSSKEEVQSLRDRKQELIAQVNDVKAKLLIAEGEGKARTSIVENWLNTANGVISEVDV 333
           YI+  +E + SLR+  QEL     DVKA++ + E     RT+ V+ WL++   +  +V+ 
Sbjct: 24  YIRDLQENMDSLRNAMQELKTVYEDVKARVDLEEQRQMKRTNEVDGWLHSVLDMEIKVNE 83

Query: 334 VQTKA--EVPNRCLCGVLP-NCCSRAKLGKQMLKLIDEMTNLLNAGRF 468
           +  K   E+  +C     P NC S  KLGK+  K + ++T + + GRF
Sbjct: 84  IXEKGDQEIQKKCPGTCCPRNCRSSYKLGKKASKKLGDVTEJRSKGRF 131


>emb|CAN69161.1| hypothetical protein VITISV_031554 [Vitis vinifera]
          Length = 955

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
 Frame = +1

Query: 154 YIKSSKEEVQSLRDRKQELIAQVNDVKAKLLIAEGEGKARTSIVENWLNTANGVISEVDV 333
           YI+  +E ++SLR+  QEL     DVK ++ + E     RT+ V+ WL++   +  EV+ 
Sbjct: 24  YIRDLQENMESLRNAMQELKNVYEDVKGRVELEEQRQMKRTNEVDGWLHSVLAMELEVNE 83

Query: 334 VQTK--AEVPNRCLCGVLP-NCCSRAKLGKQMLKLIDEMTNLLNAGRF 468
           +  K   E+  +C     P NC S  KLGK+  K +  +T L + GRF
Sbjct: 84  ILEKXDXEIQKKCPETCCPRNCRSSYKLGKKASKKLGAVTELRSKGRF 131


>ref|XP_002278676.2| PREDICTED: probable disease resistance protein At5g63020-like
           [Vitis vinifera]
          Length = 895

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
 Frame = +1

Query: 154 YIKSSKEEVQSLRDRKQELIAQVNDVKAKLLIAEGEGKARTSIVENWLNTANGVISEVDV 333
           YI+  +E + SLR+  QEL     DVKA++ + E     R + V+ WL++   +  +V+ 
Sbjct: 24  YIRDLQENMDSLRNAMQELKTVYEDVKARVDLEEQRQMKRMNEVDGWLHSVLDMEIKVNE 83

Query: 334 VQTKA--EVPNRCLCGVLP-NCCSRAKLGKQMLKLIDEMTNLLNAGRF 468
           +  K   E+  +C     P NC S  KLGK+  K + ++T L + GRF
Sbjct: 84  ILEKGDQEIQKKCPGTCCPRNCRSSYKLGKKASKKLGDVTELRSKGRF 131


>ref|XP_002278659.1| PREDICTED: disease resistance protein RFL1 [Vitis vinifera]
          Length = 937

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
 Frame = +1

Query: 154 YIKSSKEEVQSLRDRKQELIAQVNDVKAKLLIAEGEGKARTSIVENWLNTANGVISEVDV 333
           YI+  +E ++SLR+  QEL     DVK ++ + E     RT+ V+ W ++   +  EV+ 
Sbjct: 24  YIRDLQENMESLRNAMQELKNVYEDVKGRVELEEQRQMKRTNEVDGWFHSVLAMELEVNE 83

Query: 334 VQTKA--EVPNRCLCGVLP-NCCSRAKLGKQMLKLIDEMTNLLNAGRF 468
           +  K   E+  +C     P NC S  KLGK+  K +  +T L + GRF
Sbjct: 84  ILEKGDHEIQKKCPETCCPRNCRSSYKLGKKASKKLGAVTELRSKGRF 131


>ref|XP_002514137.1| leucine-rich repeat-containing protein 2, lrrc2, putative [Ricinus
           communis] gi|223546593|gb|EEF48091.1| leucine-rich
           repeat-containing protein 2, lrrc2, putative [Ricinus
           communis]
          Length = 877

 Score = 55.1 bits (131), Expect = 8e-06
 Identities = 42/156 (26%), Positives = 71/156 (45%)
 Frame = +1

Query: 70  MEILVAAIGTILSCGCNSMNASLEEKCKYIKSSKEEVQSLRDRKQELIAQVNDVKAKLLI 249
           ME++   IG IL   C++M      K  Y+ +   +V SL    +EL  + +D++ ++  
Sbjct: 1   MEVIGPLIG-ILCSTCDNM----ARKISYVINVNRKVHSLTTLLEELKYKRDDIQRQVDC 55

Query: 250 AEGEGKARTSIVENWLNTANGVISEVDVVQTKAEVPNRCLCGVLPNCCSRAKLGKQMLKL 429
           AE +G   T  V+ WL     V ++  ++        +C    + N C+R KL K++ +L
Sbjct: 56  AELKGLICTCQVQGWLERVKDVETKASLITGVLGQRKQCFMCCVANSCTRYKLSKRVSEL 115

Query: 430 IDEMTNLLNAGRFSDEALAFFVQETGMEMATTRLIG 537
             E+  L+  G F        V ET  EM     +G
Sbjct: 116 QMEINELIGKGAFDAVIADGLVSETVQEMPIRPSVG 151


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