BLASTX nr result
ID: Coptis23_contig00000323
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00000323
(1685 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002262872.2| PREDICTED: serine hydroxymethyltransferase, ... 861 0.0
ref|XP_002315363.1| precursor of transferase serine hydroxymethy... 859 0.0
gb|ABK96241.1| unknown [Populus trichocarpa x Populus deltoides] 858 0.0
gb|ABO61382.1| mitochondrial serine hydroxymethyltransferase [Po... 858 0.0
sp|P50433.1|GLYM_SOLTU RecName: Full=Serine hydroxymethyltransfe... 858 0.0
>ref|XP_002262872.2| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like [Vitis
vinifera] gi|297736687|emb|CBI25704.3| unnamed protein
product [Vitis vinifera]
Length = 518
Score = 861 bits (2225), Expect = 0.0
Identities = 427/467 (91%), Positives = 453/467 (97%)
Frame = +1
Query: 1 LNSPLEVVDPEIANIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGAR 180
LN+PL VVDPEIA+IIELEKARQWKGLELIPSENFTS+SVMQAVGS+MTNKYSEGYPGAR
Sbjct: 52 LNAPLGVVDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSIMTNKYSEGYPGAR 111
Query: 181 YYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQSLSGSPANFQVYTGLLKPHERIMAL 360
YYGGNEYIDMAE+LCQKRALEAFRLDPAKWGVNVQSLSGSPANFQVYT LLK HERIMAL
Sbjct: 112 YYGGNEYIDMAESLCQKRALEAFRLDPAKWGVNVQSLSGSPANFQVYTALLKAHERIMAL 171
Query: 361 DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAG 540
DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL+ESTGYIDYDQLEKSATLFRPKLIVAG
Sbjct: 172 DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 231
Query: 541 ASAYARLYDYGRIRKVCDKQKAILLADMAHISGLVAAGVIPSPFEYADIVTTTTHKSLRG 720
ASAYARLYDY RIRKVCDKQKAILLADMAHISGLVAAGVIPSPFEYADIVTTTTHKSLRG
Sbjct: 232 ASAYARLYDYARIRKVCDKQKAILLADMAHISGLVAAGVIPSPFEYADIVTTTTHKSLRG 291
Query: 721 PRGAMIFYRKGLKEVNKKGEEVMYDFEDKINASVFPGLQGGPHNHTIAGLAVALKQATTS 900
PRGAMIF+RKG+KEVNK+G+EV+YD+EDKIN +VFPGLQGGPHNHTIAGLAVALKQATTS
Sbjct: 292 PRGAMIFFRKGVKEVNKQGKEVLYDYEDKINQAVFPGLQGGPHNHTIAGLAVALKQATTS 351
Query: 901 EYKAYQEQVLSNCSKFAQTLTEKGYDLVSGGTENHLVLVNLKNMGIDGSRVEKVLEMVHI 1080
EYKAYQEQVLSNCSKFA+TL +KGY+LVSGGTENHLVLVNLKN GIDGSRVEKVLE VHI
Sbjct: 352 EYKAYQEQVLSNCSKFAETLIKKGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLESVHI 411
Query: 1081 AANKNTVPGDVSAMVPGGIRMGTPALTSRGFLEEDFAKVAEFFDVAVKLALKVKAETKGT 1260
AANKNTVPGDVSAMVPGGIRMGTPALTSRGF+EEDF KVAE+FD AV +A+K+KAET GT
Sbjct: 412 AANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVTVAVKIKAETTGT 471
Query: 1261 KLKDFLATIQSSSDIQSEIAKIRNDVEEYAKQFPTIGFEKETMKYKN 1401
KLKDFLAT+QSS +QSEIAK+R++VEEYAKQFPTIGFEKETMKYKN
Sbjct: 472 KLKDFLATMQSSPHLQSEIAKLRHEVEEYAKQFPTIGFEKETMKYKN 518
>ref|XP_002315363.1| precursor of transferase serine hydroxymethyltransferase 7 [Populus
trichocarpa] gi|222864403|gb|EEF01534.1| precursor of
transferase serine hydroxymethyltransferase 7 [Populus
trichocarpa]
Length = 520
Score = 859 bits (2219), Expect = 0.0
Identities = 428/467 (91%), Positives = 451/467 (96%)
Frame = +1
Query: 1 LNSPLEVVDPEIANIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGAR 180
LN+PLE VDP++A+IIELEKARQWKGLELIPSENFTS+SVMQAVGSVMTNKYSEGYPGAR
Sbjct: 55 LNAPLEAVDPQVADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGAR 114
Query: 181 YYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQSLSGSPANFQVYTGLLKPHERIMAL 360
YYGGNEYIDMAE+LCQKRALEAFRLDPAKWGVNVQSLSGSPANFQVYT LLKPHERIMAL
Sbjct: 115 YYGGNEYIDMAESLCQKRALEAFRLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMAL 174
Query: 361 DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAG 540
DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL+ESTGYIDYDQLEKSATLFRPKLIVAG
Sbjct: 175 DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 234
Query: 541 ASAYARLYDYGRIRKVCDKQKAILLADMAHISGLVAAGVIPSPFEYADIVTTTTHKSLRG 720
ASAYARLYDY RIRKVCDKQKAILLADMAHISGLVAA VIPSPFEYADIVTTTTHKSLRG
Sbjct: 235 ASAYARLYDYARIRKVCDKQKAILLADMAHISGLVAADVIPSPFEYADIVTTTTHKSLRG 294
Query: 721 PRGAMIFYRKGLKEVNKKGEEVMYDFEDKINASVFPGLQGGPHNHTIAGLAVALKQATTS 900
PRGAMIF+RKGLKEVNK+G+EV YD+EDKIN +VFPGLQGGPHNHTIAGLAVALKQATT
Sbjct: 295 PRGAMIFFRKGLKEVNKQGKEVFYDYEDKINQAVFPGLQGGPHNHTIAGLAVALKQATTV 354
Query: 901 EYKAYQEQVLSNCSKFAQTLTEKGYDLVSGGTENHLVLVNLKNMGIDGSRVEKVLEMVHI 1080
EYKAYQEQVLSNC+KFAQ+L EKGY+LVSGGTENHLVLVNLKN GIDGSRVEKVLE VHI
Sbjct: 355 EYKAYQEQVLSNCAKFAQSLVEKGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLESVHI 414
Query: 1081 AANKNTVPGDVSAMVPGGIRMGTPALTSRGFLEEDFAKVAEFFDVAVKLALKVKAETKGT 1260
AANKNTVPGDVSAMVPGGIRMGTPALTSRGF+EEDFAKVA+FFD AVKLA+++KAETKGT
Sbjct: 415 AANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVADFFDAAVKLAVEIKAETKGT 474
Query: 1261 KLKDFLATIQSSSDIQSEIAKIRNDVEEYAKQFPTIGFEKETMKYKN 1401
KLKDFLAT QS+ QSEI+K+R DVEEYAKQFPTIGFEKETMKYKN
Sbjct: 475 KLKDFLAT-QSAPHFQSEISKLRRDVEEYAKQFPTIGFEKETMKYKN 520
>gb|ABK96241.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 520
Score = 858 bits (2218), Expect = 0.0
Identities = 428/467 (91%), Positives = 450/467 (96%)
Frame = +1
Query: 1 LNSPLEVVDPEIANIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGAR 180
LN+PLE VDP++A+IIELEKARQWKGLELIPSENFTS+SVMQAVGSVMTNKYSEGYPGAR
Sbjct: 55 LNAPLEAVDPQVADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGAR 114
Query: 181 YYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQSLSGSPANFQVYTGLLKPHERIMAL 360
YYGGNEYIDMAE+LCQKRALEAFRLDPAKWGVNVQSLSGSPANFQVYT LLKPHERIMAL
Sbjct: 115 YYGGNEYIDMAESLCQKRALEAFRLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMAL 174
Query: 361 DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAG 540
DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL+ESTGYIDYDQLEKSATLFRPKLIVAG
Sbjct: 175 DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 234
Query: 541 ASAYARLYDYGRIRKVCDKQKAILLADMAHISGLVAAGVIPSPFEYADIVTTTTHKSLRG 720
ASAYARLYDY RIRKVCDKQKA LLADMAHISGLVAA VIPSPFEYADIVTTTTHKSLRG
Sbjct: 235 ASAYARLYDYARIRKVCDKQKATLLADMAHISGLVAADVIPSPFEYADIVTTTTHKSLRG 294
Query: 721 PRGAMIFYRKGLKEVNKKGEEVMYDFEDKINASVFPGLQGGPHNHTIAGLAVALKQATTS 900
PRGAMIF+RKGLKEVNK+G+EV YD+EDKIN +VFPGLQGGPHNHTIAGLAVALKQATT
Sbjct: 295 PRGAMIFFRKGLKEVNKQGKEVFYDYEDKINQAVFPGLQGGPHNHTIAGLAVALKQATTV 354
Query: 901 EYKAYQEQVLSNCSKFAQTLTEKGYDLVSGGTENHLVLVNLKNMGIDGSRVEKVLEMVHI 1080
EYKAYQEQVLSNC+KFAQ+L EKGY+LVSGGTENHLVLVNLKN GIDGSRVEKVLE VHI
Sbjct: 355 EYKAYQEQVLSNCAKFAQSLVEKGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLESVHI 414
Query: 1081 AANKNTVPGDVSAMVPGGIRMGTPALTSRGFLEEDFAKVAEFFDVAVKLALKVKAETKGT 1260
AANKNTVPGDVSAMVPGGIRMGTPALTSRGF+EEDFAKVA+FFD AVKLA+K+KAETKGT
Sbjct: 415 AANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVADFFDAAVKLAVKIKAETKGT 474
Query: 1261 KLKDFLATIQSSSDIQSEIAKIRNDVEEYAKQFPTIGFEKETMKYKN 1401
KLKDFLAT QS+ QSEI+K+R DVEEYAKQFPTIGFEKETMKYKN
Sbjct: 475 KLKDFLAT-QSAPHFQSEISKLRRDVEEYAKQFPTIGFEKETMKYKN 520
>gb|ABO61382.1| mitochondrial serine hydroxymethyltransferase [Populus tremuloides]
Length = 520
Score = 858 bits (2217), Expect = 0.0
Identities = 427/467 (91%), Positives = 452/467 (96%)
Frame = +1
Query: 1 LNSPLEVVDPEIANIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGAR 180
LN+PLE VDP++A+IIELEKARQWKGLELIPSENFTS+SVMQAVGSVMTNKYSEGYPGAR
Sbjct: 55 LNAPLEAVDPQVADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGAR 114
Query: 181 YYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQSLSGSPANFQVYTGLLKPHERIMAL 360
YYGGNEYIDMAE+LCQKRALEAFRLDPA+WGVNVQSLSGSPANFQVYT LLKPHERIMAL
Sbjct: 115 YYGGNEYIDMAESLCQKRALEAFRLDPAQWGVNVQSLSGSPANFQVYTALLKPHERIMAL 174
Query: 361 DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAG 540
DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL+ESTGYIDYDQLEKSATLFRPKLIVAG
Sbjct: 175 DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 234
Query: 541 ASAYARLYDYGRIRKVCDKQKAILLADMAHISGLVAAGVIPSPFEYADIVTTTTHKSLRG 720
ASAYARLYDY RIRKVCDKQKAILLADMAHISGLVAA VIPSPFEYADIVTTTTHKSLRG
Sbjct: 235 ASAYARLYDYARIRKVCDKQKAILLADMAHISGLVAADVIPSPFEYADIVTTTTHKSLRG 294
Query: 721 PRGAMIFYRKGLKEVNKKGEEVMYDFEDKINASVFPGLQGGPHNHTIAGLAVALKQATTS 900
PRGAMIF+RKGLKEVNK+G+EV YD+EDKIN +VFPGLQGGPHNHTIAGLAVALKQATT
Sbjct: 295 PRGAMIFFRKGLKEVNKQGKEVFYDYEDKINQAVFPGLQGGPHNHTIAGLAVALKQATTV 354
Query: 901 EYKAYQEQVLSNCSKFAQTLTEKGYDLVSGGTENHLVLVNLKNMGIDGSRVEKVLEMVHI 1080
EYKAYQEQVLSNC+KFAQ+L EKGY+LVSGGTENHLVLVNLKN GIDGSRVEKVLE VHI
Sbjct: 355 EYKAYQEQVLSNCAKFAQSLVEKGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLESVHI 414
Query: 1081 AANKNTVPGDVSAMVPGGIRMGTPALTSRGFLEEDFAKVAEFFDVAVKLALKVKAETKGT 1260
AANKNTVPGDVSAMVPGGIRMGTPALTSRGF+EEDFAKVA+FFD AVK+A+K+KAETKGT
Sbjct: 415 AANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVADFFDAAVKVAVKIKAETKGT 474
Query: 1261 KLKDFLATIQSSSDIQSEIAKIRNDVEEYAKQFPTIGFEKETMKYKN 1401
KLKDFLAT QS+ QSEI+K+R+DVEEYAKQFPTIGFEKETMKYKN
Sbjct: 475 KLKDFLAT-QSAPHFQSEISKLRHDVEEYAKQFPTIGFEKETMKYKN 520
>sp|P50433.1|GLYM_SOLTU RecName: Full=Serine hydroxymethyltransferase, mitochondrial;
Short=SHMT; AltName: Full=Glycine
hydroxymethyltransferase; AltName: Full=Serine methylase;
Flags: Precursor gi|438247|emb|CAA81082.1| glycine
hydroxymethyltransferase [Solanum tuberosum]
Length = 518
Score = 858 bits (2216), Expect = 0.0
Identities = 425/467 (91%), Positives = 451/467 (96%)
Frame = +1
Query: 1 LNSPLEVVDPEIANIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGAR 180
LN+PLEVVDPEIA+IIE EKARQWKGLELIPSENFTS+SVMQAVGSVMTNKYSEGYPGAR
Sbjct: 52 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGAR 111
Query: 181 YYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQSLSGSPANFQVYTGLLKPHERIMAL 360
YYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQ LSGSPANFQVYT LLKPHERIMAL
Sbjct: 112 YYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQPLSGSPANFQVYTALLKPHERIMAL 171
Query: 361 DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAG 540
DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAG
Sbjct: 172 DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAG 231
Query: 541 ASAYARLYDYGRIRKVCDKQKAILLADMAHISGLVAAGVIPSPFEYADIVTTTTHKSLRG 720
ASAYARLYDY RIRKVC+KQKAILLADMAHISGLVAAGVIPSPF+YAD+VTTTTHKSLRG
Sbjct: 232 ASAYARLYDYDRIRKVCNKQKAILLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRG 291
Query: 721 PRGAMIFYRKGLKEVNKKGEEVMYDFEDKINASVFPGLQGGPHNHTIAGLAVALKQATTS 900
PRGAMIFYRKG+KEVNK+G+EV YD+EDKIN +VFPGLQGGPHNHTI GLAVALKQATT
Sbjct: 292 PRGAMIFYRKGVKEVNKQGKEVFYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTP 351
Query: 901 EYKAYQEQVLSNCSKFAQTLTEKGYDLVSGGTENHLVLVNLKNMGIDGSRVEKVLEMVHI 1080
EY+AYQEQVLSN SKFAQ L EKGY+LVSGGT+NHLVLVN+KN GIDGSRVEKVLE VHI
Sbjct: 352 EYRAYQEQVLSNSSKFAQALGEKGYELVSGGTDNHLVLVNMKNKGIDGSRVEKVLEAVHI 411
Query: 1081 AANKNTVPGDVSAMVPGGIRMGTPALTSRGFLEEDFAKVAEFFDVAVKLALKVKAETKGT 1260
AANKNTVPGDVSAMVPGGIRMGTPALTSRGFLEEDF KVA+FFD AVK+A+KVKAET+GT
Sbjct: 412 AANKNTVPGDVSAMVPGGIRMGTPALTSRGFLEEDFVKVADFFDAAVKIAVKVKAETQGT 471
Query: 1261 KLKDFLATIQSSSDIQSEIAKIRNDVEEYAKQFPTIGFEKETMKYKN 1401
KLKDF+AT++SS+ I+SEIAK+R+DVEEYAKQFPTIGFEKETMKYKN
Sbjct: 472 KLKDFVATLESSAPIKSEIAKLRHDVEEYAKQFPTIGFEKETMKYKN 518